RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 PDE3BQ13370 1112 aa9.39□□□□□ -0.91
CDC7-203ENST00000428239 WDR43Q15061 677 aaKnown RBP eCLIP9.39□□□□□ -0.91
CDC7-203ENST00000428239 DIAPH1O60610 1272 aaKnown RBP9.39□□□□□ -0.91
CDC7-203ENST00000428239 U2AF1L5P0DN76 240 aaPredicted RBP9.39□□□□□ -0.91
CDC7-203ENST00000428239 FLT4P35916 1363 aa9.39□□□□□ -0.91
CDC7-203ENST00000428239 U2AF1Q01081 240 aaKnown RBP eCLIP9.39□□□□□ -0.91
CDC7-203ENST00000428239 OVOS2A0A0J9YW53 1432 aa9.38□□□□□ -0.91
CDC7-203ENST00000428239 OVOS2Q6IE36 1432 aa9.38□□□□□ -0.91
CDC7-203ENST00000428239 PPP2R1AP30153 589 aa9.38□□□□□ -0.91
CDC7-203ENST00000428239 RBM6P78332 1123 aaKnown RBP9.38□□□□□ -0.91
CDC7-203ENST00000428239 GJD4Q96KN9 370 aaPredicted RBP9.38□□□□□ -0.91
CDC7-203ENST00000428239 MRS2Q9HD23 443 aa9.38□□□□□ -0.91
CDC7-203ENST00000428239 HMOX1P09601 288 aa9.38□□□□□ -0.91
CDC7-203ENST00000428239 MYOM1P52179 1685 aa9.38□□□□□ -0.91
CDC7-203ENST00000428239 AKAP12Q02952 1782 aa9.37□□□□□ -0.91
CDC7-203ENST00000428239 AATKQ6ZMQ8 1374 aa9.37□□□□□ -0.91
CDC7-203ENST00000428239 POTEAQ6S8J7 498 aa9.37□□□□□ -0.91
CDC7-203ENST00000428239 FNBP4Q8N3X1 1017 aaPredicted RBP9.37□□□□□ -0.91
CDC7-203ENST00000428239 TCP11L2Q8N4U5 519 aa9.37□□□□□ -0.91
CDC7-203ENST00000428239 DDX54Q8TDD1 881 aaKnown RBP9.37□□□□□ -0.91
CDC7-203ENST00000428239 PIK3C2AO00443 1686 aa9.37□□□□□ -0.91
CDC7-203ENST00000428239 MON2Q7Z3U7 1717 aa9.37□□□□□ -0.91
CDC7-203ENST00000428239 PRKRIP1Q9H875 184 aaPredicted RBP9.36□□□□□ -0.91
CDC7-203ENST00000428239 CPDO75976 1380 aa9.36□□□□□ -0.91
CDC7-203ENST00000428239 TRPM3Q9HCF6 1732 aaPredicted RBP9.36□□□□□ -0.91
CDC7-203ENST00000428239 ERBB3P21860 1342 aa9.36□□□□□ -0.91
CDC7-203ENST00000428239 WDR17Q8IZU2 1322 aa9.36□□□□□ -0.91
CDC7-203ENST00000428239 SHPRHQ149N8 1683 aa9.36□□□□□ -0.91
CDC7-203ENST00000428239 MYBBP1AQ9BQG0 1328 aaKnown RBP9.36□□□□□ -0.91
CDC7-203ENST00000428239 TATP17735 454 aaPredicted RBP9.36□□□□□ -0.91
CDC7-203ENST00000428239 VPS72Q15906 364 aa9.36□□□□□ -0.91
CDC7-203ENST00000428239 SULT6B1Q6IMI4 303 aa9.36□□□□□ -0.91
CDC7-203ENST00000428239 SYTL4Q96C24 671 aaPredicted RBP9.35□□□□□ -0.91
CDC7-203ENST00000428239 EIF4A2Q14240 407 aaKnown RBP9.35□□□□□ -0.91
CDC7-203ENST00000428239 DDB1Q16531 1140 aa9.35□□□□□ -0.91
CDC7-203ENST00000428239 SEPT12Q8IYM1 358 aa9.35□□□□□ -0.91
CDC7-203ENST00000428239 ALS2Q96Q42 1657 aa9.35□□□□□ -0.91
CDC7-203ENST00000428239 SENP3-EIF4A1A0A087X0R7 540 aa9.34□□□□□ -0.91
CDC7-203ENST00000428239 EXOC5O00471 708 aa9.34□□□□□ -0.91
CDC7-203ENST00000428239 FAM9BQ8IZU0 186 aa9.34□□□□□ -0.91
CDC7-203ENST00000428239 FAM182BQ5T319 152 aa9.34□□□□□ -0.91
CDC7-203ENST00000428239 IL2RBP14784 551 aa9.34□□□□□ -0.91
CDC7-203ENST00000428239 NBPF6Q5VWK0 638 aa9.34□□□□□ -0.91
CDC7-203ENST00000428239 NBPF4Q96M43 638 aa9.34□□□□□ -0.91
CDC7-203ENST00000428239 MAPK8IP3Q9UPT6 1336 aa9.34□□□□□ -0.91
CDC7-203ENST00000428239 CARD10Q9BWT7 1032 aa9.33□□□□□ -0.92
CDC7-203ENST00000428239 INSRP06213 1382 aa9.33□□□□□ -0.92
CDC7-203ENST00000428239 EYA1Q99502 592 aa9.33□□□□□ -0.92
CDC7-203ENST00000428239 RTL1A6NKG5 1358 aa9.33□□□□□ -0.92
CDC7-203ENST00000428239 NPC1L1Q9UHC9 1359 aa9.33□□□□□ -0.92
CDC7-203ENST00000428239 NEUROD2Q15784 382 aa9.33□□□□□ -0.92
CDC7-203ENST00000428239 RGS17Q9UGC6 210 aaPredicted RBP9.33□□□□□ -0.92
CDC7-203ENST00000428239 SPATA31A1Q5TZJ5 1347 aa9.32□□□□□ -0.92
CDC7-203ENST00000428239 SPATA31A5Q5VU36 1347 aa9.32□□□□□ -0.92
CDC7-203ENST00000428239 SPATA31A7Q8IWB4 1347 aa9.32□□□□□ -0.92
CDC7-203ENST00000428239 KIF20BQ96Q89 1820 aa9.32□□□□□ -0.92
CDC7-203ENST00000428239 BLMP54132 1417 aaPredicted RBP9.32□□□□□ -0.92
CDC7-203ENST00000428239 CRB1P82279 1406 aa9.32□□□□□ -0.92
CDC7-203ENST00000428239 SF3B2Q13435 895 aaKnown RBP9.32□□□□□ -0.92
CDC7-203ENST00000428239 NRKQ7Z2Y5 1582 aa9.32□□□□□ -0.92
CDC7-203ENST00000428239 SLIT3O75094 1523 aa9.32□□□□□ -0.92
CDC7-203ENST00000428239 SALL2Q9Y467 1007 aaPredicted RBP9.32□□□□□ -0.92
CDC7-203ENST00000428239 CAMTA1Q9Y6Y1 1673 aa9.32□□□□□ -0.92
CDC7-203ENST00000428239 C1orf141Q5JVX7 400 aa9.31□□□□□ -0.92
CDC7-203ENST00000428239 AEBP1Q8IUX7 1158 aa9.31□□□□□ -0.92
CDC7-203ENST00000428239 COL5A2P05997 1499 aaPredicted RBP9.31□□□□□ -0.92
CDC7-203ENST00000428239 BCL9LQ86UU0 1499 aa9.31□□□□□ -0.92
CDC7-203ENST00000428239 KRT27Q7Z3Y8 459 aa9.31□□□□□ -0.92
CDC7-203ENST00000428239 COL22A1Q8NFW1 1626 aaPredicted RBP9.31□□□□□ -0.92
CDC7-203ENST00000428239 PHRF1Q9P1Y6 1649 aaKnown RBP9.31□□□□□ -0.92
CDC7-203ENST00000428239 SLIT2O94813 1529 aa9.31□□□□□ -0.92
CDC7-203ENST00000428239 SPG7Q9UQ90 795 aa9.31□□□□□ -0.92
CDC7-203ENST00000428239 CCDC146Q8IYE0 955 aa9.3□□□□□ -0.92
CDC7-203ENST00000428239 ZCRB1Q8TBF4 217 aaKnown RBP9.3□□□□□ -0.92
CDC7-203ENST00000428239 CDCA7Q9BWT1 371 aaPredicted RBP9.3□□□□□ -0.92
CDC7-203ENST00000428239 NFAT5O94916 1531 aa9.3□□□□□ -0.92
CDC7-203ENST00000428239 PRKAR2BP31323 418 aa9.3□□□□□ -0.92
CDC7-203ENST00000428239 PLEKHO1Q53GL0 409 aaPredicted RBP9.3□□□□□ -0.92
CDC7-203ENST00000428239 ZNF530Q6P9A1 599 aaPredicted RBP9.3□□□□□ -0.92
CDC7-203ENST00000428239 THRAP3Q9Y2W1 955 aaKnown RBP9.3□□□□□ -0.92
CDC7-203ENST00000428239 PARD3Q8TEW0 1356 aa9.3□□□□□ -0.92
CDC7-203ENST00000428239 COL14A1Q05707 1796 aaKnown RBP9.3□□□□□ -0.92
CDC7-203ENST00000428239 KIF24Q5T7B8 1368 aa9.29□□□□□ -0.92
CDC7-203ENST00000428239 KAT6BQ8WYB5 2073 aa9.29□□□□□ -0.92
CDC7-203ENST00000428239 MIER1Q8N108 512 aa9.29□□□□□ -0.92
CDC7-203ENST00000428239 ACSBG1Q96GR2 724 aa9.29□□□□□ -0.92
CDC7-203ENST00000428239 PNNQ9H307 717 aaKnown RBP9.29□□□□□ -0.92
CDC7-203ENST00000428239 IL13P35225 146 aa9.28□□□□□ -0.92
CDC7-203ENST00000428239 RTF1Q92541 710 aaKnown RBP9.28□□□□□ -0.92
CDC7-203ENST00000428239 CDK12Q9NYV4 1490 aaPredicted RBP9.27□□□□□ -0.93
CDC7-203ENST00000428239 ATRNO75882 1429 aa9.27□□□□□ -0.93
CDC7-203ENST00000428239 BARGINQ6ZT62 677 aa9.27□□□□□ -0.93
CDC7-203ENST00000428239 LTN1O94822 1766 aa9.27□□□□□ -0.93
CDC7-203ENST00000428239 RRP7AQ9Y3A4 280 aaKnown RBP9.26□□□□□ -0.93
CDC7-203ENST00000428239 ABCA3Q99758 1704 aa9.26□□□□□ -0.93
CDC7-203ENST00000428239 MAP2P11137 1827 aaKnown RBP9.26□□□□□ -0.93
CDC7-203ENST00000428239 AMOTQ4VCS5 1084 aa9.26□□□□□ -0.93
CDC7-203ENST00000428239 CCDC184Q52MB2 194 aa9.26□□□□□ -0.93
CDC7-203ENST00000428239 TRIM37O94972 964 aa9.25□□□□□ -0.93
CDC7-203ENST00000428239 MPRIPQ6WCQ1 1025 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms