RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 TCP11L2Q8N4U5 519 aa25.74■■□□□ 1.71
MSH5-207ENST00000425703 EP400Q96L91 3159 aa25.74■■□□□ 1.71
MSH5-207ENST00000425703 CRB1P82279 1406 aa25.73■■□□□ 1.71
MSH5-207ENST00000425703 COL18A1P39060 1754 aa25.72■■□□□ 1.71
MSH5-207ENST00000425703 SOX12O15370 315 aa25.72■■□□□ 1.71
MSH5-207ENST00000425703 AXIN2Q9Y2T1 843 aa25.72■■□□□ 1.71
MSH5-207ENST00000425703 BRWD3Q6RI45 1802 aa25.72■■□□□ 1.71
MSH5-207ENST00000425703 USP35Q9P2H5 1018 aa25.71■■□□□ 1.71
MSH5-207ENST00000425703 WDR17Q8IZU2 1322 aa25.7■■□□□ 1.71
MSH5-207ENST00000425703 HSPA5P11021 654 aaKnown RBP25.69■■□□□ 1.7
MSH5-207ENST00000425703 BLMP54132 1417 aaPredicted RBP25.69■■□□□ 1.7
MSH5-207ENST00000425703 COG3Q96JB2 828 aa25.68■■□□□ 1.7
MSH5-207ENST00000425703 TOM1L2Q6ZVM7 507 aa25.66■■□□□ 1.7
MSH5-207ENST00000425703 FYB1O15117 783 aa25.64■■□□□ 1.7
MSH5-207ENST00000425703 CARD10Q9BWT7 1032 aa25.63■■□□□ 1.69
MSH5-207ENST00000425703 MYOM1P52179 1685 aa25.62■■□□□ 1.69
MSH5-207ENST00000425703 CDCA7Q9BWT1 371 aaPredicted RBP25.62■■□□□ 1.69
MSH5-207ENST00000425703 CSB-PGBD3P0DP91 1061 aa25.61■■□□□ 1.69
MSH5-207ENST00000425703 CARD14Q9BXL6 1004 aa25.61■■□□□ 1.69
MSH5-207ENST00000425703 ERBB3P21860 1342 aa25.61■■□□□ 1.69
MSH5-207ENST00000425703 PDE3BQ13370 1112 aa25.6■■□□□ 1.69
MSH5-207ENST00000425703 SF3B2Q13435 895 aaKnown RBP25.6■■□□□ 1.69
MSH5-207ENST00000425703 FAM196AQ6ZSG2 479 aa25.59■■□□□ 1.69
MSH5-207ENST00000425703 CCDC7Q96M83 1385 aa25.58■■□□□ 1.69
MSH5-207ENST00000425703 IP6K1Q92551 441 aa25.58■■□□□ 1.69
MSH5-207ENST00000425703 NSD3Q9BZ95 1437 aa25.57■■□□□ 1.68
MSH5-207ENST00000425703 C11orf95C9JLR9 678 aaPredicted RBP25.57■■□□□ 1.68
MSH5-207ENST00000425703 GGNBP2Q9H3C7 697 aa25.57■■□□□ 1.68
MSH5-207ENST00000425703 PARP4Q9UKK3 1724 aaKnown RBP25.57■■□□□ 1.68
MSH5-207ENST00000425703 LTN1O94822 1766 aa25.56■■□□□ 1.68
MSH5-207ENST00000425703 FAM182BQ5T319 152 aa25.55■■□□□ 1.68
MSH5-207ENST00000425703 MAP3K19Q56UN5 1328 aa25.55■■□□□ 1.68
MSH5-207ENST00000425703 RGPD5Q99666 1765 aa25.54■■□□□ 1.68
MSH5-207ENST00000425703 ANKRD24Q8TF21 1146 aa25.54■■□□□ 1.68
MSH5-207ENST00000425703 RTL1A6NKG5 1358 aa25.54■■□□□ 1.68
MSH5-207ENST00000425703 DISP2A7MBM2 1401 aa25.54■■□□□ 1.68
MSH5-207ENST00000425703 DDB1Q16531 1140 aa25.53■■□□□ 1.68
MSH5-207ENST00000425703 POLR3GLQ9BT43 218 aa25.53■■□□□ 1.68
MSH5-207ENST00000425703 CGNL1Q0VF96 1302 aa25.53■■□□□ 1.68
MSH5-207ENST00000425703 HOXC9P31274 260 aa25.51■■□□□ 1.67
MSH5-207ENST00000425703 AMPHP49418 695 aa25.51■■□□□ 1.67
MSH5-207ENST00000425703 NLRP2Q9NX02 1062 aa25.51■■□□□ 1.67
MSH5-207ENST00000425703 BAG6P46379 1132 aa25.5■■□□□ 1.67
MSH5-207ENST00000425703 KIF24Q5T7B8 1368 aa25.5■■□□□ 1.67
MSH5-207ENST00000425703 FBLN1P23142 703 aa25.49■■□□□ 1.67
MSH5-207ENST00000425703 DEFB132Q7Z7B7 95 aa25.49■■□□□ 1.67
MSH5-207ENST00000425703 KIF20BQ96Q89 1820 aa25.49■■□□□ 1.67
MSH5-207ENST00000425703 LRRC37A3O60309 1634 aa25.48■■□□□ 1.67
MSH5-207ENST00000425703 OVOS2A0A0G2JMS6 1433 aa25.47■■□□□ 1.67
MSH5-207ENST00000425703 RGPD1P0DJD0 1748 aa25.47■■□□□ 1.67
MSH5-207ENST00000425703 RRS1Q15050 365 aaKnown RBP25.47■■□□□ 1.67
MSH5-207ENST00000425703 PANK3Q9H999 370 aa25.46■■□□□ 1.67
MSH5-207ENST00000425703 WNK3Q9BYP7 1800 aa25.46■■□□□ 1.67
MSH5-207ENST00000425703 BCL9O00512 1426 aa25.46■■□□□ 1.67
MSH5-207ENST00000425703 EXOC5O00471 708 aa25.45■■□□□ 1.66
MSH5-207ENST00000425703 TRIM37O94972 964 aa25.45■■□□□ 1.66
MSH5-207ENST00000425703 IL2RBP14784 551 aa25.44■■□□□ 1.66
MSH5-207ENST00000425703 FAM208AQ9UK61 1670 aaKnown RBP25.43■■□□□ 1.66
MSH5-207ENST00000425703 FLT4P35916 1363 aa25.43■■□□□ 1.66
MSH5-207ENST00000425703 MARCH10Q8NA82 808 aaPredicted RBP25.42■■□□□ 1.66
MSH5-207ENST00000425703 TNS2Q63HR2 1409 aa25.42■■□□□ 1.66
MSH5-207ENST00000425703 INSRP06213 1382 aa25.42■■□□□ 1.66
MSH5-207ENST00000425703 KIF7Q2M1P5 1343 aa25.41■■□□□ 1.66
MSH5-207ENST00000425703 PEAK1Q9H792 1746 aa25.41■■□□□ 1.66
MSH5-207ENST00000425703 LTV1Q96GA3 475 aaPredicted RBP25.41■■□□□ 1.66
MSH5-207ENST00000425703 NSD2O96028 1365 aa25.41■■□□□ 1.66
MSH5-207ENST00000425703 SMG6Q86US8 1419 aaKnown RBP25.4■■□□□ 1.66
MSH5-207ENST00000425703 PARD3Q8TEW0 1356 aa25.4■■□□□ 1.66
MSH5-207ENST00000425703 TNS1Q9HBL0 1735 aaKnown RBP25.4■■□□□ 1.66
MSH5-207ENST00000425703 EN1Q05925 392 aaPredicted RBP25.39■■□□□ 1.66
MSH5-207ENST00000425703 APBA3O96018 575 aa25.38■■□□□ 1.65
MSH5-207ENST00000425703 HSP90AB2PQ58FF8 381 aa25.37■■□□□ 1.65
MSH5-207ENST00000425703 CAMKK2Q96RR4 588 aa25.36■■□□□ 1.65
MSH5-207ENST00000425703 EMILIN1Q9Y6C2 1016 aa25.36■■□□□ 1.65
MSH5-207ENST00000425703 BCL11BQ9C0K0 894 aaPredicted RBP25.35■■□□□ 1.65
MSH5-207ENST00000425703 KNSTRNQ9Y448 316 aa25.35■■□□□ 1.65
MSH5-207ENST00000425703 WASHC2AQ641Q2 1341 aa25.34■■□□□ 1.65
MSH5-207ENST00000425703 NBPF6Q5VWK0 638 aa25.33■■□□□ 1.65
MSH5-207ENST00000425703 NBPF4Q96M43 638 aa25.33■■□□□ 1.65
MSH5-207ENST00000425703 POLKQ9UBT6 870 aa25.33■■□□□ 1.65
MSH5-207ENST00000425703 ANKRD26Q9UPS8 1709 aa25.32■■□□□ 1.64
MSH5-207ENST00000425703 EZH2Q15910 746 aaKnown RBP25.31■■□□□ 1.64
MSH5-207ENST00000425703 PLSCR1O15162 318 aa25.29■■□□□ 1.64
MSH5-207ENST00000425703 PPM1GO15355 546 aaPredicted RBP25.29■■□□□ 1.64
MSH5-207ENST00000425703 AMER1Q5JTC6 1135 aaPredicted RBP25.27■■□□□ 1.64
MSH5-207ENST00000425703 MORC1Q86VD1 984 aa25.27■■□□□ 1.64
MSH5-207ENST00000425703 SBF2Q86WG5 1849 aa25.27■■□□□ 1.64
MSH5-207ENST00000425703 TNNT2P45379 298 aaPredicted RBP25.26■■□□□ 1.63
MSH5-207ENST00000425703 ZCRB1Q8TBF4 217 aaKnown RBP25.26■■□□□ 1.63
MSH5-207ENST00000425703 RAPGEF4Q8WZA2 1011 aa25.26■■□□□ 1.63
MSH5-207ENST00000425703 MEGF6O75095 1541 aa25.26■■□□□ 1.63
MSH5-207ENST00000425703 PER1O15534 1290 aaPredicted RBP25.25■■□□□ 1.63
MSH5-207ENST00000425703 NCAPD2Q15021 1401 aa25.25■■□□□ 1.63
MSH5-207ENST00000425703 USHBP1Q8N6Y0 703 aa25.24■■□□□ 1.63
MSH5-207ENST00000425703 TATP17735 454 aaPredicted RBP25.23■■□□□ 1.63
MSH5-207ENST00000425703 PTF1AQ7RTS3 328 aa25.23■■□□□ 1.63
MSH5-207ENST00000425703 DDX54Q8TDD1 881 aaKnown RBP25.23■■□□□ 1.63
MSH5-207ENST00000425703 MAP2P11137 1827 aaKnown RBP25.23■■□□□ 1.63
MSH5-207ENST00000425703 RGPD3A6NKT7 1758 aaPredicted RBP25.23■■□□□ 1.63
MSH5-207ENST00000425703 RGPD2P0DJD1 1756 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms