RNA–Protein interactions for RNA: ENST00000425237.5

NEK6-208, Transcript of NIMA related kinase 6, humanhuman

TSL 3

Gene NEK6, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-208ENST00000425237 SLIT2O94813 1529 aa15.53■□□□□ 0.08
NEK6-208ENST00000425237 BLMP54132 1417 aaPredicted RBP15.53■□□□□ 0.08
NEK6-208ENST00000425237 FLT4P35916 1363 aa15.53■□□□□ 0.08
NEK6-208ENST00000425237 ZNF772Q68DY9 489 aaPredicted RBP15.53■□□□□ 0.08
NEK6-208ENST00000425237 AXIN2Q9Y2T1 843 aa15.53■□□□□ 0.08
NEK6-208ENST00000425237 MTHFSP49914 203 aa15.52■□□□□ 0.08
NEK6-208ENST00000425237 BTG4Q9NY30 223 aa15.52■□□□□ 0.08
NEK6-208ENST00000425237 COL14A1Q05707 1796 aaKnown RBP15.52■□□□□ 0.07
NEK6-208ENST00000425237 INSRP06213 1382 aa15.51■□□□□ 0.07
NEK6-208ENST00000425237 MYBBP1AQ9BQG0 1328 aaKnown RBP15.51■□□□□ 0.07
NEK6-208ENST00000425237 PPM1GO15355 546 aaPredicted RBP15.51■□□□□ 0.07
NEK6-208ENST00000425237 DIEXFQ68CQ4 756 aaKnown RBP15.51■□□□□ 0.07
NEK6-208ENST00000425237 UNC5CLQ8IV45 518 aa15.51■□□□□ 0.07
NEK6-208ENST00000425237 AFF2P51816 1311 aa15.5■□□□□ 0.07
NEK6-208ENST00000425237 HSP90AB2PQ58FF8 381 aa15.5■□□□□ 0.07
NEK6-208ENST00000425237 LMO7Q8WWI1 1683 aa15.5■□□□□ 0.07
NEK6-208ENST00000425237 CAMTA1Q9Y6Y1 1673 aa15.5■□□□□ 0.07
NEK6-208ENST00000425237 COL18A1P39060 1754 aa15.49■□□□□ 0.07
NEK6-208ENST00000425237 BCL9LQ86UU0 1499 aa15.49■□□□□ 0.07
NEK6-208ENST00000425237 CDK12Q9NYV4 1490 aaPredicted RBP15.49■□□□□ 0.07
NEK6-208ENST00000425237 EVA1CP58658 441 aa15.49■□□□□ 0.07
NEK6-208ENST00000425237 USP21Q9UK80 565 aa15.49■□□□□ 0.07
NEK6-208ENST00000425237 ERBB3P21860 1342 aa15.48■□□□□ 0.07
NEK6-208ENST00000425237 ANKRD24Q8TF21 1146 aa15.48■□□□□ 0.07
NEK6-208ENST00000425237 WDR17Q8IZU2 1322 aa15.47■□□□□ 0.07
NEK6-208ENST00000425237 COL5A2P05997 1499 aaPredicted RBP15.47■□□□□ 0.07
NEK6-208ENST00000425237 CFAP53Q96M91 514 aa15.47■□□□□ 0.07
NEK6-208ENST00000425237 RGS17Q9UGC6 210 aaPredicted RBP15.47■□□□□ 0.07
NEK6-208ENST00000425237 PEAK1Q9H792 1746 aa15.46■□□□□ 0.07
NEK6-208ENST00000425237 MAP2P11137 1827 aaKnown RBP15.46■□□□□ 0.07
NEK6-208ENST00000425237 VPS72Q15906 364 aa15.46■□□□□ 0.07
NEK6-208ENST00000425237 STRN4Q9NRL3 753 aa15.46■□□□□ 0.07
NEK6-208ENST00000425237 TRPC5Q9UL62 973 aaPredicted RBP15.46■□□□□ 0.07
NEK6-208ENST00000425237 LTN1O94822 1766 aa15.46■□□□□ 0.07
NEK6-208ENST00000425237 NWD2Q9ULI1 1742 aa15.46■□□□□ 0.06
NEK6-208ENST00000425237 CSB-PGBD3P0DP91 1061 aa15.45■□□□□ 0.06
NEK6-208ENST00000425237 EIF4A2Q14240 407 aaKnown RBP15.45■□□□□ 0.06
NEK6-208ENST00000425237 DIAPH1O60610 1272 aaKnown RBP15.44■□□□□ 0.06
NEK6-208ENST00000425237 IL13P35225 146 aa15.44■□□□□ 0.06
NEK6-208ENST00000425237 LARP1Q6PKG0 1096 aaKnown RBP15.44■□□□□ 0.06
NEK6-208ENST00000425237 LTV1Q96GA3 475 aaPredicted RBP15.44■□□□□ 0.06
NEK6-208ENST00000425237 CARD10Q9BWT7 1032 aa15.44■□□□□ 0.06
NEK6-208ENST00000425237 PLCH1Q4KWH8 1693 aa15.44■□□□□ 0.06
NEK6-208ENST00000425237 ATRNO75882 1429 aa15.43■□□□□ 0.06
NEK6-208ENST00000425237 CRB1P82279 1406 aa15.43■□□□□ 0.06
NEK6-208ENST00000425237 TOM1L2Q6ZVM7 507 aa15.43■□□□□ 0.06
NEK6-208ENST00000425237 QTRT2Q9H974 415 aaKnown RBP15.43■□□□□ 0.06
NEK6-208ENST00000425237 SPATA31A5Q5VU36 1347 aa15.43■□□□□ 0.06
NEK6-208ENST00000425237 SPATA31A7Q8IWB4 1347 aa15.43■□□□□ 0.06
NEK6-208ENST00000425237 COL3A1P02461 1466 aaPredicted RBP15.42■□□□□ 0.06
NEK6-208ENST00000425237 POTEAQ6S8J7 498 aa15.42■□□□□ 0.06
NEK6-208ENST00000425237 SPATA31A1Q5TZJ5 1347 aa15.42■□□□□ 0.06
NEK6-208ENST00000425237 NRAPQ86VF7 1730 aa15.41■□□□□ 0.06
NEK6-208ENST00000425237 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.41■□□□□ 0.06
NEK6-208ENST00000425237 NBPF6Q5VWK0 638 aa15.41■□□□□ 0.06
NEK6-208ENST00000425237 GJD4Q96KN9 370 aaPredicted RBP15.41■□□□□ 0.06
NEK6-208ENST00000425237 NBPF4Q96M43 638 aa15.41■□□□□ 0.06
NEK6-208ENST00000425237 EYA1Q99502 592 aa15.41■□□□□ 0.06
NEK6-208ENST00000425237 NLRP2Q9NX02 1062 aa15.41■□□□□ 0.06
NEK6-208ENST00000425237 NUDCQ9Y266 331 aa15.41■□□□□ 0.06
NEK6-208ENST00000425237 THRAP3Q9Y2W1 955 aaKnown RBP15.41■□□□□ 0.06
NEK6-208ENST00000425237 TCP11L2Q8N4U5 519 aa15.4■□□□□ 0.06
NEK6-208ENST00000425237 CCDC9Q9Y3X0 531 aaKnown RBP15.4■□□□□ 0.06
NEK6-208ENST00000425237 IGSF1Q8N6C5 1336 aa15.4■□□□□ 0.06
NEK6-208ENST00000425237 RXRBP28702 533 aa15.39■□□□□ 0.05
NEK6-208ENST00000425237 BARGINQ6ZT62 677 aa15.39■□□□□ 0.05
NEK6-208ENST00000425237 NCAPD2Q15021 1401 aa15.38■□□□□ 0.05
NEK6-208ENST00000425237 RBM6P78332 1123 aaKnown RBP15.38■□□□□ 0.05
NEK6-208ENST00000425237 RGPD5Q99666 1765 aa15.37■□□□□ 0.05
NEK6-208ENST00000425237 CCER2I3L3R5 266 aa15.37■□□□□ 0.05
NEK6-208ENST00000425237 ONECUT3O60422 494 aaPredicted RBP15.37■□□□□ 0.05
NEK6-208ENST00000425237 FAM208AQ9UK61 1670 aaKnown RBP15.36■□□□□ 0.05
NEK6-208ENST00000425237 CDCA7Q9BWT1 371 aaPredicted RBP15.36■□□□□ 0.05
NEK6-208ENST00000425237 USP35Q9P2H5 1018 aa15.36■□□□□ 0.05
NEK6-208ENST00000425237 U2SURPO15042 1029 aaKnown RBP15.35■□□□□ 0.05
NEK6-208ENST00000425237 CCDC184Q52MB2 194 aa15.35■□□□□ 0.05
NEK6-208ENST00000425237 MIER1Q8N108 512 aa15.35■□□□□ 0.05
NEK6-208ENST00000425237 MRS2Q9HD23 443 aa15.35■□□□□ 0.05
NEK6-208ENST00000425237 KDRP35968 1356 aa15.35■□□□□ 0.05
NEK6-208ENST00000425237 U2AF1L5P0DN76 240 aaPredicted RBP15.34■□□□□ 0.05
NEK6-208ENST00000425237 IL2RBP14784 551 aa15.34■□□□□ 0.05
NEK6-208ENST00000425237 U2AF1Q01081 240 aaKnown RBP eCLIP15.34■□□□□ 0.05
NEK6-208ENST00000425237 SULT6B1Q6IMI4 303 aa15.34■□□□□ 0.05
NEK6-208ENST00000425237 USHBP1Q8N6Y0 703 aa15.34■□□□□ 0.05
NEK6-208ENST00000425237 PLEKHG2Q9H7P9 1386 aa15.34■□□□□ 0.05
NEK6-208ENST00000425237 DISP2A7MBM2 1401 aa15.34■□□□□ 0.05
NEK6-208ENST00000425237 FAM98CQ17RN3 349 aaKnown RBP15.33■□□□□ 0.04
NEK6-208ENST00000425237 RAPGEF4Q8WZA2 1011 aa15.33■□□□□ 0.04
NEK6-208ENST00000425237 GLI3P10071 1580 aa15.32■□□□□ 0.04
NEK6-208ENST00000425237 FCHSD2O94868 740 aa15.32■□□□□ 0.04
NEK6-208ENST00000425237 TATP17735 454 aaPredicted RBP15.32■□□□□ 0.04
NEK6-208ENST00000425237 WDR43Q15061 677 aaKnown RBP eCLIP15.32■□□□□ 0.04
NEK6-208ENST00000425237 PNISRQ8TF01 805 aaKnown RBP15.32■□□□□ 0.04
NEK6-208ENST00000425237 RGPD1P0DJD0 1748 aa15.31■□□□□ 0.04
NEK6-208ENST00000425237 HMOX1P09601 288 aa15.31■□□□□ 0.04
NEK6-208ENST00000425237 AEBP1Q8IUX7 1158 aa15.31■□□□□ 0.04
NEK6-208ENST00000425237 PNNQ9H307 717 aaKnown RBP15.31■□□□□ 0.04
NEK6-208ENST00000425237 RSPH6AQ9H0K4 717 aa15.3■□□□□ 0.04
NEK6-208ENST00000425237 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.3■□□□□ 0.044e-6■■□□□ 11.9
NEK6-208ENST00000425237 OVOS2A0A0G2JMS6 1433 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms