RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 RGL3Q3MIN7 710 aa10.07□□□□□ -0.8
EPHA4-206ENST00000424339 SIN3AQ96ST3 1273 aa10.07□□□□□ -0.8
EPHA4-206ENST00000424339 SEPT9Q9UHD8 586 aaPredicted RBP10.07□□□□□ -0.8
EPHA4-206ENST00000424339 DIP2AQ14689 1571 aa10.06□□□□□ -0.8
EPHA4-206ENST00000424339 NRXN1Q9ULB1 1477 aa10.06□□□□□ -0.8
EPHA4-206ENST00000424339 TXNDC2Q86VQ3 553 aa10.06□□□□□ -0.8
EPHA4-206ENST00000424339 TSR3Q9UJK0 312 aaKnown RBP10.06□□□□□ -0.8
EPHA4-206ENST00000424339 LAMC1P11047 1609 aa10.06□□□□□ -0.8
EPHA4-206ENST00000424339 SETBP1Q9Y6X0 1596 aa10.05□□□□□ -0.8
EPHA4-206ENST00000424339 PHF14O94880 888 aa10.05□□□□□ -0.8
EPHA4-206ENST00000424339 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.05□□□□□ -0.8
EPHA4-206ENST00000424339 IQGAP1P46940 1657 aa10.04□□□□□ -0.8
EPHA4-206ENST00000424339 ZEB1P37275 1124 aaPredicted RBP10.04□□□□□ -0.8
EPHA4-206ENST00000424339 DCAF11Q8TEB1 546 aa10.04□□□□□ -0.8
EPHA4-206ENST00000424339 L3MBTL2Q969R5 705 aa10.04□□□□□ -0.8
EPHA4-206ENST00000424339 HPS5Q9UPZ3 1129 aa10.04□□□□□ -0.8
EPHA4-206ENST00000424339 NPHP4O75161 1426 aaPredicted RBP10.04□□□□□ -0.8
EPHA4-206ENST00000424339 PIK3C2GO75747 1445 aa10.04□□□□□ -0.8
EPHA4-206ENST00000424339 KIAA1210Q9ULL0 1709 aa10.04□□□□□ -0.8
EPHA4-206ENST00000424339 FAM98CQ17RN3 349 aaKnown RBP10.03□□□□□ -0.8
EPHA4-206ENST00000424339 LRCH3Q96II8 777 aa10.03□□□□□ -0.8
EPHA4-206ENST00000424339 PIK3R4Q99570 1358 aa10.02□□□□□ -0.8
EPHA4-206ENST00000424339 PRAG1Q86YV5 1406 aa10.02□□□□□ -0.81
EPHA4-206ENST00000424339 STRCQ7RTU9 1775 aa10.02□□□□□ -0.81
EPHA4-206ENST00000424339 LCE2BO14633 110 aa10.02□□□□□ -0.81
EPHA4-206ENST00000424339 LTKP29376 864 aa10.02□□□□□ -0.81
EPHA4-206ENST00000424339 HSPA2P54652 639 aa10.02□□□□□ -0.81
EPHA4-206ENST00000424339 C6orf132Q5T0Z8 1188 aa10.01□□□□□ -0.81
EPHA4-206ENST00000424339 TBX22Q9Y458 520 aa10.01□□□□□ -0.81
EPHA4-206ENST00000424339 PRKD2Q9BZL6 878 aa10□□□□□ -0.81
EPHA4-206ENST00000424339 EMILIN3Q9NT22 766 aa10□□□□□ -0.81
EPHA4-206ENST00000424339 ADGRF5Q8IZF2 1346 aa10□□□□□ -0.81
EPHA4-206ENST00000424339 ALKQ9UM73 1620 aa10□□□□□ -0.81
EPHA4-206ENST00000424339 NRXN3Q9Y4C0 1643 aa10□□□□□ -0.81
EPHA4-206ENST00000424339 TRIM6-TRIM34B2RNG4 842 aa9.99□□□□□ -0.81
EPHA4-206ENST00000424339 NRG2O14511 850 aaPredicted RBP9.99□□□□□ -0.81
EPHA4-206ENST00000424339 PPP4CP60510 307 aa9.99□□□□□ -0.81
EPHA4-206ENST00000424339 ZNF787Q6DD87 383 aa9.99□□□□□ -0.81
EPHA4-206ENST00000424339 BCANQ96GW7 911 aa9.99□□□□□ -0.81
EPHA4-206ENST00000424339 C14orf93Q9H972 538 aaKnown RBP9.99□□□□□ -0.81
EPHA4-206ENST00000424339 KDM2AQ9Y2K7 1162 aa9.99□□□□□ -0.81
EPHA4-206ENST00000424339 ADAMTS13Q76LX8 1427 aa9.99□□□□□ -0.81
EPHA4-206ENST00000424339 EPAS1Q99814 870 aa9.98□□□□□ -0.81
EPHA4-206ENST00000424339 SETD1AO15047 1707 aaKnown RBP9.98□□□□□ -0.81
EPHA4-206ENST00000424339 RALGAPBQ86X10 1494 aa9.98□□□□□ -0.81
EPHA4-206ENST00000424339 TRPM1Q7Z4N2 1603 aa9.97□□□□□ -0.81
EPHA4-206ENST00000424339 MFSD10Q14728 455 aa9.96□□□□□ -0.82
EPHA4-206ENST00000424339 NUTM2DQ5VT03 806 aaPredicted RBP9.96□□□□□ -0.82
EPHA4-206ENST00000424339 GPRASP1Q5JY77 1395 aa9.96□□□□□ -0.82
EPHA4-206ENST00000424339 RBM33Q96EV2 1170 aaKnown RBP9.95□□□□□ -0.82
EPHA4-206ENST00000424339 ROCK2O75116 1388 aaKnown RBP9.95□□□□□ -0.82
EPHA4-206ENST00000424339 TECPR2O15040 1411 aa9.95□□□□□ -0.82
EPHA4-206ENST00000424339 NKTRP30414 1462 aaKnown RBP9.95□□□□□ -0.82
EPHA4-206ENST00000424339 NWD1Q149M9 1564 aa9.95□□□□□ -0.82
EPHA4-206ENST00000424339 CHD2O14647 1828 aaKnown RBP9.94□□□□□ -0.82
EPHA4-206ENST00000424339 KNDC1Q76NI1 1749 aa9.94□□□□□ -0.82
EPHA4-206ENST00000424339 ADGRB1O14514 1584 aa9.94□□□□□ -0.82
EPHA4-206ENST00000424339 LRPPRCP42704 1394 aaKnown RBP9.94□□□□□ -0.82
EPHA4-206ENST00000424339 EIF3AQ14152 1382 aaKnown RBP9.94□□□□□ -0.82
EPHA4-206ENST00000424339 ABCC11Q96J66 1382 aa9.94□□□□□ -0.82
EPHA4-206ENST00000424339 CFAP70Q5T0N1 1121 aa9.94□□□□□ -0.82
EPHA4-206ENST00000424339 PACS2Q86VP3 889 aa9.94□□□□□ -0.82
EPHA4-206ENST00000424339 SLC26A8Q96RN1 970 aa9.94□□□□□ -0.82
EPHA4-206ENST00000424339 XRN1Q8IZH2 1706 aaKnown RBP9.93□□□□□ -0.82
EPHA4-206ENST00000424339 CPS1P31327 1500 aa9.93□□□□□ -0.82
EPHA4-206ENST00000424339 DLC1Q96QB1 1528 aa9.93□□□□□ -0.82
EPHA4-206ENST00000424339 PTCH1Q13635 1447 aa9.93□□□□□ -0.82
EPHA4-206ENST00000424339 METP08581 1390 aa9.93□□□□□ -0.82
EPHA4-206ENST00000424339 KCNA6P17658 529 aa9.93□□□□□ -0.82
EPHA4-206ENST00000424339 SIRT1Q96EB6 747 aa9.93□□□□□ -0.82
EPHA4-206ENST00000424339 V9GY48 417 aaPredicted RBP9.93□□□□□ -0.82
EPHA4-206ENST00000424339 FAM135BQ49AJ0 1406 aa9.92□□□□□ -0.82
EPHA4-206ENST00000424339 YTHDC2Q9H6S0 1430 aaKnown RBP9.92□□□□□ -0.82
EPHA4-206ENST00000424339 NCOA3Q9Y6Q9 1424 aa9.92□□□□□ -0.82
EPHA4-206ENST00000424339 NBPF8Q3BBV2 869 aa9.92□□□□□ -0.82
EPHA4-206ENST00000424339 TJAP1Q5JTD0 557 aa9.92□□□□□ -0.82
EPHA4-206ENST00000424339 ASXL1Q8IXJ9 1541 aa9.92□□□□□ -0.82
EPHA4-206ENST00000424339 PPP1R18Q6NYC8 613 aa9.91□□□□□ -0.82
EPHA4-206ENST00000424339 GTPBP6O43824 516 aaPredicted RBP9.9□□□□□ -0.82
EPHA4-206ENST00000424339 CARD11Q9BXL7 1154 aa9.9□□□□□ -0.82
EPHA4-206ENST00000424339 PDZRN3Q9UPQ7 1066 aa9.9□□□□□ -0.82
EPHA4-206ENST00000424339 AMOTL2Q9Y2J4 779 aa9.9□□□□□ -0.82
EPHA4-206ENST00000424339 NBPF1Q3BBV0 1214 aa9.89□□□□□ -0.83
EPHA4-206ENST00000424339 IL21Q9HBE4 155 aa9.89□□□□□ -0.83
EPHA4-206ENST00000424339 PTPRUQ92729 1446 aa9.89□□□□□ -0.83
EPHA4-206ENST00000424339 ARHGEF28Q8N1W1 1705 aaKnown RBP9.88□□□□□ -0.83
EPHA4-206ENST00000424339 TMEM132EQ6IEE7 984 aa9.88□□□□□ -0.83
EPHA4-206ENST00000424339 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.88□□□□□ -0.83
EPHA4-206ENST00000424339 SBNO2Q9Y2G9 1366 aa9.88□□□□□ -0.83
EPHA4-206ENST00000424339 IQSEC2Q5JU85 1478 aa9.87□□□□□ -0.83
EPHA4-206ENST00000424339 ZNF775Q96BV0 537 aaPredicted RBP9.87□□□□□ -0.83
EPHA4-206ENST00000424339 MTRQ99707 1265 aa9.87□□□□□ -0.83
EPHA4-206ENST00000424339 USP47Q96K76 1375 aa9.87□□□□□ -0.83
EPHA4-206ENST00000424339 ZNF335Q9H4Z2 1342 aaPredicted RBP9.86□□□□□ -0.83
EPHA4-206ENST00000424339 DCCP43146 1447 aa9.86□□□□□ -0.83
EPHA4-206ENST00000424339 EIF4G2P78344 907 aaKnown RBP eCLIP9.86□□□□□ -0.83
EPHA4-206ENST00000424339 DDX12PQ92771 950 aa9.86□□□□□ -0.83
EPHA4-206ENST00000424339 TRAK1Q9UPV9 953 aa9.86□□□□□ -0.83
EPHA4-206ENST00000424339 ROBO2Q9HCK4 1378 aa9.86□□□□□ -0.83
EPHA4-206ENST00000424339 STRCP1A6NGW2 1772 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms