RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 NME9Q86XW9 330 aa15.21■□□□□ 0.03
USP49-204ENST00000423567 PIK3C2AO00443 1686 aa15.21■□□□□ 0.03
USP49-204ENST00000423567 SLIT3O75094 1523 aa15.21■□□□□ 0.03
USP49-204ENST00000423567 ANKRD36BQ8N2N9 1353 aa15.21■□□□□ 0.02
USP49-204ENST00000423567 MON2Q7Z3U7 1717 aa15.2■□□□□ 0.02
USP49-204ENST00000423567 USP31Q70CQ4 1352 aa15.2■□□□□ 0.02
USP49-204ENST00000423567 SEPT12Q8IYM1 358 aa15.19■□□□□ 0.02
USP49-204ENST00000423567 POLR3GLQ9BT43 218 aa15.19■□□□□ 0.02
USP49-204ENST00000423567 AATKQ6ZMQ8 1374 aa15.19■□□□□ 0.02
USP49-204ENST00000423567 GLI3P10071 1580 aa15.19■□□□□ 0.02
USP49-204ENST00000423567 SPATA31A5Q5VU36 1347 aa15.18■□□□□ 0.02
USP49-204ENST00000423567 SPATA31A7Q8IWB4 1347 aa15.18■□□□□ 0.02
USP49-204ENST00000423567 NRAPQ86VF7 1730 aa15.18■□□□□ 0.02
USP49-204ENST00000423567 FAM98CQ17RN3 349 aaKnown RBP15.18■□□□□ 0.02
USP49-204ENST00000423567 ONECUT3O60422 494 aaPredicted RBP15.17■□□□□ 0.02
USP49-204ENST00000423567 ARHGEF25Q86VW2 580 aa15.17■□□□□ 0.02
USP49-204ENST00000423567 UPF1Q92900 1129 aaKnown RBP eCLIP15.17■□□□□ 0.02
USP49-204ENST00000423567 COG3Q96JB2 828 aa15.17■□□□□ 0.02
USP49-204ENST00000423567 ZRANB1Q9UGI0 708 aa15.17■□□□□ 0.02
USP49-204ENST00000423567 USP35Q9P2H5 1018 aa15.16■□□□□ 0.02
USP49-204ENST00000423567 SPATA31A1Q5TZJ5 1347 aa15.16■□□□□ 0.02
USP49-204ENST00000423567 LARP1Q6PKG0 1096 aaKnown RBP15.15■□□□□ 0.02
USP49-204ENST00000423567 CAMTA1Q9Y6Y1 1673 aa15.15■□□□□ 0.02
USP49-204ENST00000423567 CSB-PGBD3P0DP91 1061 aa15.14■□□□□ 0.01
USP49-204ENST00000423567 KRT27Q7Z3Y8 459 aa15.14■□□□□ 0.01
USP49-204ENST00000423567 COL5A2P05997 1499 aaPredicted RBP15.14■□□□□ 0.01
USP49-204ENST00000423567 TOM1L2Q6ZVM7 507 aa15.13■□□□□ 0.01
USP49-204ENST00000423567 TCP11L2Q8N4U5 519 aa15.13■□□□□ 0.01
USP49-204ENST00000423567 LMO7Q8WWI1 1683 aa15.12■□□□□ 0.01
USP49-204ENST00000423567 NFAT5O94916 1531 aa15.12■□□□□ 0.01
USP49-204ENST00000423567 OVOS2A0A0J9YW53 1432 aa15.12■□□□□ 0.01
USP49-204ENST00000423567 OVOS2Q6IE36 1432 aa15.12■□□□□ 0.01
USP49-204ENST00000423567 BARGINQ6ZT62 677 aa15.12■□□□□ 0.01
USP49-204ENST00000423567 THRAP3Q9Y2W1 955 aaKnown RBP15.12■□□□□ 0.01
USP49-204ENST00000423567 CRB1P82279 1406 aa15.11■□□□□ 0.01
USP49-204ENST00000423567 AXIN2Q9Y2T1 843 aa15.11■□□□□ 0.01
USP49-204ENST00000423567 WDR17Q8IZU2 1322 aa15.11■□□□□ 0.01
USP49-204ENST00000423567 USP54Q70EL1 1684 aa15.1■□□□□ 0.01
USP49-204ENST00000423567 FYB1O15117 783 aa15.1■□□□□ 0.01
USP49-204ENST00000423567 CCDC125Q86Z20 511 aa15.1■□□□□ 0.01
USP49-204ENST00000423567 GGNBP2Q9H3C7 697 aa15.1■□□□□ 0.01
USP49-204ENST00000423567 ABCC6O95255 1503 aa15.1■□□□□ 0.01
USP49-204ENST00000423567 NSD3Q9BZ95 1437 aa15.09■□□□□ 0.01
USP49-204ENST00000423567 CGNL1Q0VF96 1302 aa15.09■□□□□ 0.01
USP49-204ENST00000423567 PDE3BQ13370 1112 aa15.08■□□□□ 0
USP49-204ENST00000423567 SF3B2Q13435 895 aaKnown RBP15.08■□□□□ 0
USP49-204ENST00000423567 AMPHP49418 695 aa15.07■□□□□ 0
USP49-204ENST00000423567 CARD14Q9BXL6 1004 aa15.07■□□□□ 0
USP49-204ENST00000423567 MYOM1P52179 1685 aa15.06■□□□□ 0
USP49-204ENST00000423567 IP6K1Q92551 441 aa15.06■□□□□ 0
USP49-204ENST00000423567 CDCA7Q9BWT1 371 aaPredicted RBP15.06■□□□□ 0
USP49-204ENST00000423567 CARD10Q9BWT7 1032 aa15.06■□□□□ 0
USP49-204ENST00000423567 THSD7AQ9UPZ6 1657 aa15.06■□□□□ 0
USP49-204ENST00000423567 COL18A1P39060 1754 aa15.06■□□□□ 0
USP49-204ENST00000423567 ANKRD24Q8TF21 1146 aa15.05■□□□□ -0
USP49-204ENST00000423567 PANK3Q9H999 370 aa15.05■□□□□ -0
USP49-204ENST00000423567 NLRP2Q9NX02 1062 aa15.05■□□□□ -0
USP49-204ENST00000423567 ERBB3P21860 1342 aa15.05■□□□□ -0
USP49-204ENST00000423567 CCDC7Q96M83 1385 aa15.05■□□□□ -0
USP49-204ENST00000423567 BLMP54132 1417 aaPredicted RBP15.05■□□□□ -0
USP49-204ENST00000423567 MAP3K19Q56UN5 1328 aa15.04■□□□□ -0
USP49-204ENST00000423567 RTL1A6NKG5 1358 aa15.03■□□□□ -0
USP49-204ENST00000423567 KIF7Q2M1P5 1343 aa15.03■□□□□ -0
USP49-204ENST00000423567 C11orf95C9JLR9 678 aaPredicted RBP15.03■□□□□ -0
USP49-204ENST00000423567 DDB1Q16531 1140 aa15.03■□□□□ -0
USP49-204ENST00000423567 FAM196AQ6ZSG2 479 aa15.03■□□□□ -0
USP49-204ENST00000423567 BRWD3Q6RI45 1802 aa15.03■□□□□ -0
USP49-204ENST00000423567 FBLN1P23142 703 aa15.02■□□□□ -0
USP49-204ENST00000423567 HOXC9P31274 260 aa15.02■□□□□ -0
USP49-204ENST00000423567 RRS1Q15050 365 aaKnown RBP15.02■□□□□ -0
USP49-204ENST00000423567 LTV1Q96GA3 475 aaPredicted RBP15.02■□□□□ -0
USP49-204ENST00000423567 ZBTB12Q9Y330 459 aaPredicted RBP15.02■□□□□ -0
USP49-204ENST00000423567 LTN1O94822 1766 aa15.01□□□□□ -0.01
USP49-204ENST00000423567 FAM182BQ5T319 152 aa15.01□□□□□ -0.01
USP49-204ENST00000423567 KNSTRNQ9Y448 316 aa15.01□□□□□ -0.01
USP49-204ENST00000423567 KIF20BQ96Q89 1820 aa15.01□□□□□ -0.01
USP49-204ENST00000423567 SMG6Q86US8 1419 aaKnown RBP15□□□□□ -0.01
USP49-204ENST00000423567 NSD2O96028 1365 aa14.99□□□□□ -0.01
USP49-204ENST00000423567 BAG6P46379 1132 aa14.99□□□□□ -0.01
USP49-204ENST00000423567 FLT4P35916 1363 aa14.98□□□□□ -0.01
USP49-204ENST00000423567 KIF24Q5T7B8 1368 aa14.98□□□□□ -0.01
USP49-204ENST00000423567 EXOC5O00471 708 aa14.98□□□□□ -0.01
USP49-204ENST00000423567 IL2RBP14784 551 aa14.98□□□□□ -0.01
USP49-204ENST00000423567 RGPD5Q99666 1765 aa14.98□□□□□ -0.01
USP49-204ENST00000423567 PPM1GO15355 546 aaPredicted RBP14.97□□□□□ -0.01
USP49-204ENST00000423567 PARP4Q9UKK3 1724 aaKnown RBP14.97□□□□□ -0.01
USP49-204ENST00000423567 OVOS2A0A0G2JMS6 1433 aa14.96□□□□□ -0.01
USP49-204ENST00000423567 DISP2A7MBM2 1401 aa14.96□□□□□ -0.01
USP49-204ENST00000423567 TNNT2P45379 298 aaPredicted RBP14.96□□□□□ -0.01
USP49-204ENST00000423567 EMILIN1Q9Y6C2 1016 aa14.96□□□□□ -0.01
USP49-204ENST00000423567 INSRP06213 1382 aa14.96□□□□□ -0.02
USP49-204ENST00000423567 TRIM37O94972 964 aa14.95□□□□□ -0.02
USP49-204ENST00000423567 HSP90AB2PQ58FF8 381 aa14.95□□□□□ -0.02
USP49-204ENST00000423567 DEFB132Q7Z7B7 95 aa14.95□□□□□ -0.02
USP49-204ENST00000423567 MORC1Q86VD1 984 aa14.95□□□□□ -0.02
USP49-204ENST00000423567 TNS2Q63HR2 1409 aa14.93□□□□□ -0.02
USP49-204ENST00000423567 LRRC37A3O60309 1634 aa14.93□□□□□ -0.02
USP49-204ENST00000423567 EP400Q96L91 3159 aa14.93□□□□□ -0.02
USP49-204ENST00000423567 RBM42Q9BTD8 480 aaKnown RBP14.93□□□□□ -0.02
USP49-204ENST00000423567 FAM208AQ9UK61 1670 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms