RNA–Protein interactions for RNA: ENST00000422939.1

TRPS1-204, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2

Gene TRPS1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-204ENST00000422939 DZIP3Q86Y13 1208 aaKnown RBP12.24□□□□□ -0.45
TRPS1-204ENST00000422939 ZIC2O95409 532 aaPredicted RBP12.23□□□□□ -0.45
TRPS1-204ENST00000422939 CCDC116Q8IYX3 515 aa12.23□□□□□ -0.45
TRPS1-204ENST00000422939 ITPKCQ96DU7 683 aa12.23□□□□□ -0.45
TRPS1-204ENST00000422939 PRM3Q9NNZ6 103 aa12.23□□□□□ -0.45
TRPS1-204ENST00000422939 NBPF20Q3BBV1 942 aa12.22□□□□□ -0.45
TRPS1-204ENST00000422939 SENP2Q9HC62 589 aa12.22□□□□□ -0.45
TRPS1-204ENST00000422939 EMILIN1Q9Y6C2 1016 aa12.22□□□□□ -0.45
TRPS1-204ENST00000422939 NR1H3Q13133 447 aa12.21□□□□□ -0.45
TRPS1-204ENST00000422939 TRIM46Q7Z4K8 759 aa12.21□□□□□ -0.45
TRPS1-204ENST00000422939 ZFAND3Q9H8U3 227 aa12.21□□□□□ -0.45
TRPS1-204ENST00000422939 C11orf95C9JLR9 678 aaPredicted RBP12.2□□□□□ -0.46
TRPS1-204ENST00000422939 BMP1P13497 986 aa12.19□□□□□ -0.46
TRPS1-204ENST00000422939 DHX9Q08211 1270 aaKnown RBP12.19□□□□□ -0.46
TRPS1-204ENST00000422939 INTS6LQ5JSJ4 861 aaKnown RBP12.19□□□□□ -0.46
TRPS1-204ENST00000422939 TBC1D2BQ9UPU7 963 aa12.19□□□□□ -0.46
TRPS1-204ENST00000422939 PPP1R26Q5T8A7 1209 aaPredicted RBP12.18□□□□□ -0.46
TRPS1-204ENST00000422939 KIFC2Q96AC6 838 aa12.18□□□□□ -0.46
TRPS1-204ENST00000422939 TRIM47Q96LD4 638 aa12.18□□□□□ -0.46
TRPS1-204ENST00000422939 PCDHB9Q9Y5E1 797 aa12.18□□□□□ -0.46
TRPS1-204ENST00000422939 MCCD1P59942 119 aaPredicted RBP12.17□□□□□ -0.46
TRPS1-204ENST00000422939 MCM6Q14566 821 aa12.17□□□□□ -0.46
TRPS1-204ENST00000422939 PGPEP1Q9NXJ5 209 aa12.17□□□□□ -0.46
TRPS1-204ENST00000422939 ZNF330Q9Y3S2 320 aaPredicted RBP12.17□□□□□ -0.46
TRPS1-204ENST00000422939 ESPNB1AK53 854 aa12.16□□□□□ -0.46
TRPS1-204ENST00000422939 MRPL14Q6P1L8 145 aaKnown RBP12.16□□□□□ -0.46
TRPS1-204ENST00000422939 ZNF592Q92610 1267 aa12.15□□□□□ -0.46
TRPS1-204ENST00000422939 SCARF1Q14162 830 aa12.14□□□□□ -0.47
TRPS1-204ENST00000422939 SEPT12Q8IYM1 358 aa12.14□□□□□ -0.47
TRPS1-204ENST00000422939 SNRPBP14678 240 aaKnown RBP12.13□□□□□ -0.47
TRPS1-204ENST00000422939 MEIOBQ8N635 442 aa12.13□□□□□ -0.47
TRPS1-204ENST00000422939 ZFP42Q96MM3 310 aa12.13□□□□□ -0.47
TRPS1-204ENST00000422939 GDPD2Q9HCC8 539 aa12.13□□□□□ -0.47
TRPS1-204ENST00000422939 IRF5Q13568 498 aa12.12□□□□□ -0.47
TRPS1-204ENST00000422939 ERVH48-1M5A8F1 160 aa12.11□□□□□ -0.47
TRPS1-204ENST00000422939 GIGYF1O75420 1035 aaPredicted RBP12.11□□□□□ -0.47
TRPS1-204ENST00000422939 RAB15P59190 212 aa12.11□□□□□ -0.47
TRPS1-204ENST00000422939 Q6ZVU0 165 aa12.11□□□□□ -0.47
TRPS1-204ENST00000422939 PURBQ96QR8 312 aaKnown RBP12.11□□□□□ -0.47
TRPS1-204ENST00000422939 UPP2O95045 317 aa12.1□□□□□ -0.47
TRPS1-204ENST00000422939 FLIIQ13045 1269 aa12.1□□□□□ -0.47
TRPS1-204ENST00000422939 CCDC125Q86Z20 511 aa12.1□□□□□ -0.47
TRPS1-204ENST00000422939 ZNF775Q96BV0 537 aaPredicted RBP12.1□□□□□ -0.47
TRPS1-204ENST00000422939 ABL2P42684 1182 aa12.09□□□□□ -0.47
TRPS1-204ENST00000422939 TSEN34Q9BSV6 310 aaKnown RBP12.09□□□□□ -0.47
TRPS1-204ENST00000422939 TMPRSS4Q9NRS4 437 aa12.09□□□□□ -0.47
TRPS1-204ENST00000422939 CBLBQ13191 982 aa12.08□□□□□ -0.48
TRPS1-204ENST00000422939 RNF20Q5VTR2 975 aa12.08□□□□□ -0.48
TRPS1-204ENST00000422939 LINC00528Q8N1L1 170 aa12.08□□□□□ -0.48
TRPS1-204ENST00000422939 TRIM52Q96A61 297 aa12.07□□□□□ -0.48
TRPS1-204ENST00000422939 COG6Q9Y2V7 657 aa12.07□□□□□ -0.48
TRPS1-204ENST00000422939 BMP2P12643 396 aa12.06□□□□□ -0.48
TRPS1-204ENST00000422939 EIF4G2P78344 907 aaKnown RBP eCLIP12.06□□□□□ -0.48
TRPS1-204ENST00000422939 WASHC4Q2M389 1173 aa12.06□□□□□ -0.48
TRPS1-204ENST00000422939 C6orf118Q5T5N4 469 aa12.06□□□□□ -0.48
TRPS1-204ENST00000422939 ZNF784Q8NCA9 323 aaPredicted RBP12.06□□□□□ -0.48
TRPS1-204ENST00000422939 LILRA1O75019 489 aa12.05□□□□□ -0.48
TRPS1-204ENST00000422939 CEP126Q9P2H0 1117 aa12.04□□□□□ -0.48
TRPS1-204ENST00000422939 VAC14Q08AM6 782 aa12.03□□□□□ -0.48
TRPS1-204ENST00000422939 ADD1P35611 737 aaKnown RBP12.02□□□□□ -0.49
TRPS1-204ENST00000422939 RAD21O60216 631 aa12□□□□□ -0.49
TRPS1-204ENST00000422939 UBTFP17480 764 aaKnown RBP12□□□□□ -0.49
TRPS1-204ENST00000422939 POM121Q96HA1 1249 aa12□□□□□ -0.49
TRPS1-204ENST00000422939 AGBL1Q96MI9 1066 aa12□□□□□ -0.49
TRPS1-204ENST00000422939 CYLDQ9NQC7 956 aa12□□□□□ -0.49
TRPS1-204ENST00000422939 SPINT1O43278 529 aa11.99□□□□□ -0.49
TRPS1-204ENST00000422939 ADH1AP07327 375 aa11.99□□□□□ -0.49
TRPS1-204ENST00000422939 SOS2Q07890 1332 aaPredicted RBP11.99□□□□□ -0.49
TRPS1-204ENST00000422939 RELBQ01201 579 aa11.98□□□□□ -0.49
TRPS1-204ENST00000422939 ERVK-9P63128 1117 aa11.97□□□□□ -0.49
TRPS1-204ENST00000422939 WWC1Q8IX03 1113 aa11.97□□□□□ -0.49
TRPS1-204ENST00000422939 PCDHB11Q9Y5F2 797 aa11.97□□□□□ -0.49
TRPS1-204ENST00000422939 MAN1A2O60476 641 aa11.96□□□□□ -0.49
TRPS1-204ENST00000422939 SOX11P35716 441 aa11.96□□□□□ -0.49
TRPS1-204ENST00000422939 PTGIRP43119 386 aa11.96□□□□□ -0.49
TRPS1-204ENST00000422939 CC2D2BQ6DHV5 1058 aa11.96□□□□□ -0.49
TRPS1-204ENST00000422939 PHTF2Q8N3S3 785 aa11.96□□□□□ -0.49
TRPS1-204ENST00000422939 KDF1Q8NAX2 398 aaPredicted RBP11.96□□□□□ -0.49
TRPS1-204ENST00000422939 TTLL8A6PVC2 850 aa11.95□□□□□ -0.5
TRPS1-204ENST00000422939 SOBPA7XYQ1 873 aa11.95□□□□□ -0.5
TRPS1-204ENST00000422939 SEMA3FQ13275 785 aa11.95□□□□□ -0.5
TRPS1-204ENST00000422939 TREML4Q6UXN2 200 aa11.95□□□□□ -0.5
TRPS1-204ENST00000422939 ZNF395Q9H8N7 513 aaPredicted RBP11.95□□□□□ -0.5
TRPS1-204ENST00000422939 TERTO14746 1132 aaKnown RBP11.94□□□□□ -0.5
TRPS1-204ENST00000422939 SLFNL1Q499Z3 407 aa11.94□□□□□ -0.5
TRPS1-204ENST00000422939 CCDC85AQ96PX6 553 aaPredicted RBP11.94□□□□□ -0.5
TRPS1-204ENST00000422939 NXF1Q9UBU9 619 aaKnown RBP11.94□□□□□ -0.5
TRPS1-204ENST00000422939 DNMT3LQ9UJW3 386 aa11.93□□□□□ -0.5
TRPS1-204ENST00000422939 SCTRP47872 440 aa11.92□□□□□ -0.5
TRPS1-204ENST00000422939 NFX1Q12986 1120 aaKnown RBP11.92□□□□□ -0.5
TRPS1-204ENST00000422939 INSM2Q96T92 566 aaPredicted RBP11.92□□□□□ -0.5
TRPS1-204ENST00000422939 ATP5J2-PTCD1G3V325 749 aa11.91□□□□□ -0.5
TRPS1-204ENST00000422939 CTSOP43234 321 aaPredicted RBP11.91□□□□□ -0.5
TRPS1-204ENST00000422939 NPAS3Q8IXF0 933 aa11.91□□□□□ -0.5
TRPS1-204ENST00000422939 ESF1Q9H501 851 aaKnown RBP11.91□□□□□ -0.5
TRPS1-204ENST00000422939 CHIC2Q9UKJ5 165 aa11.91□□□□□ -0.5
TRPS1-204ENST00000422939 WFS1O76024 890 aa11.9□□□□□ -0.5
TRPS1-204ENST00000422939 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.9□□□□□ -0.5
TRPS1-204ENST00000422939 TSGA10IPQ3SY00 556 aa11.9□□□□□ -0.5
TRPS1-204ENST00000422939 LCE2AQ5TA79 106 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms