RNA–Protein interactions for RNA: ENST00000422939.1

TRPS1-204, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2

Gene TRPS1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-204ENST00000422939 AEBP2Q6ZN18 517 aaPredicted RBP33.42■■■□□ 2.94
TRPS1-204ENST00000422939 CHIC1Q5VXU3 224 aa32.42■■■□□ 2.78
TRPS1-204ENST00000422939 PHF23Q9BUL5 403 aaPredicted RBP28.47■■■□□ 2.15
TRPS1-204ENST00000422939 SENP3Q9H4L4 574 aaPredicted RBP28.43■■■□□ 2.14
TRPS1-204ENST00000422939 FOXD1Q16676 465 aa26.41■■□□□ 1.82
TRPS1-204ENST00000422939 PLPPR3Q6T4P5 718 aa26.21■■□□□ 1.79
TRPS1-204ENST00000422939 PPP6R1Q9UPN7 881 aa25.21■■□□□ 1.63
TRPS1-204ENST00000422939 ADRA2BP18089 450 aa25.16■■□□□ 1.62
TRPS1-204ENST00000422939 PIAS4Q8N2W9 510 aaPredicted RBP24.82■■□□□ 1.56
TRPS1-204ENST00000422939 MSH5O43196 834 aa24.47■■□□□ 1.51
TRPS1-204ENST00000422939 SCAF1Q9H7N4 1312 aaKnown RBP23.08■■□□□ 1.28
TRPS1-204ENST00000422939 PPP4R3CPQ6ZMV5 832 aa23.06■■□□□ 1.28
TRPS1-204ENST00000422939 MAPK8IP2Q13387 824 aaPredicted RBP22.91■■□□□ 1.26
TRPS1-204ENST00000422939 POTEDQ86YR6 584 aa22.72■■□□□ 1.23
TRPS1-204ENST00000422939 DMRT2Q9Y5R5 561 aa22.65■■□□□ 1.22
TRPS1-204ENST00000422939 CNKSR2Q8WXI2 1034 aa22.49■■□□□ 1.19
TRPS1-204ENST00000422939 NCBP3Q53F19 620 aaKnown RBP22.4■■□□□ 1.18
TRPS1-204ENST00000422939 KCNA4P22459 653 aa22.21■■□□□ 1.15
TRPS1-204ENST00000422939 RNF216Q9NWF9 866 aaPredicted RBP22.11■■□□□ 1.13
TRPS1-204ENST00000422939 HOXD11P31277 338 aaPredicted RBP22.1■■□□□ 1.13
TRPS1-204ENST00000422939 NPM3O75607 178 aaKnown RBP22.04■■□□□ 1.12
TRPS1-204ENST00000422939 DCAF8L1A6NGE4 600 aa21.65■■□□□ 1.06
TRPS1-204ENST00000422939 DNAJC5BQ9UF47 199 aa21.5■■□□□ 1.03
TRPS1-204ENST00000422939 SLC4A1APQ9BWU0 796 aaKnown RBP21.11■□□□□ 0.97
TRPS1-204ENST00000422939 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.03■□□□□ 0.96
TRPS1-204ENST00000422939 RNF39Q9H2S5 420 aa20.94■□□□□ 0.94
TRPS1-204ENST00000422939 SLC4A2P04920 1241 aa20.88■□□□□ 0.93
TRPS1-204ENST00000422939 C1QBPQ07021 282 aaKnown RBP20.69■□□□□ 0.9
TRPS1-204ENST00000422939 U3KPZ7 1027 aaPredicted RBP20.65■□□□□ 0.9
TRPS1-204ENST00000422939 CACNB1Q02641 598 aaPredicted RBP20.58■□□□□ 0.89
TRPS1-204ENST00000422939 FOXD4L1Q9NU39 408 aa20.53■□□□□ 0.88
TRPS1-204ENST00000422939 ZBTB22O15209 634 aa20.42■□□□□ 0.86
TRPS1-204ENST00000422939 MYCNP04198 464 aaPredicted RBP20.38■□□□□ 0.85
TRPS1-204ENST00000422939 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.34■□□□□ 0.85
TRPS1-204ENST00000422939 HNRNPUL2Q1KMD3 747 aaKnown RBP20.34■□□□□ 0.85
TRPS1-204ENST00000422939 SAMD1Q6SPF0 538 aaPredicted RBP20.25■□□□□ 0.83
TRPS1-204ENST00000422939 APLP2Q06481 763 aa20.19■□□□□ 0.82
TRPS1-204ENST00000422939 EHMT2Q96KQ7 1210 aa20.17■□□□□ 0.82
TRPS1-204ENST00000422939 SPINK5Q9NQ38 1064 aaPredicted RBP20.15■□□□□ 0.82
TRPS1-204ENST00000422939 CSRNP3Q8WYN3 585 aa20.11■□□□□ 0.81
TRPS1-204ENST00000422939 CAPN15O75808 1086 aa20.09■□□□□ 0.81
TRPS1-204ENST00000422939 TRHP20396 242 aaPredicted RBP19.93■□□□□ 0.78
TRPS1-204ENST00000422939 ZNF219Q9P2Y4 722 aaPredicted RBP19.93■□□□□ 0.78
TRPS1-204ENST00000422939 ATXN8OSP0DMR3 200 aa19.87■□□□□ 0.77
TRPS1-204ENST00000422939 ATF5Q9Y2D1 282 aaPredicted RBP19.84■□□□□ 0.77
TRPS1-204ENST00000422939 DSG3P32926 999 aa19.83■□□□□ 0.77
TRPS1-204ENST00000422939 ABCB7O75027 752 aa19.67■□□□□ 0.74
TRPS1-204ENST00000422939 POLA2Q14181 598 aa19.57■□□□□ 0.72
TRPS1-204ENST00000422939 ZBTB12Q9Y330 459 aaPredicted RBP19.23■□□□□ 0.67
TRPS1-204ENST00000422939 FBLN2P98095 1184 aa19.04■□□□□ 0.64
TRPS1-204ENST00000422939 MKRN4PQ13434 485 aaPredicted RBP18.97■□□□□ 0.63
TRPS1-204ENST00000422939 RBM42Q9BTD8 480 aaKnown RBP18.91■□□□□ 0.62
TRPS1-204ENST00000422939 OSCARQ8IYS5 282 aa18.87■□□□□ 0.61
TRPS1-204ENST00000422939 SPDYE2BA6NHP3 402 aa18.7■□□□□ 0.58
TRPS1-204ENST00000422939 SPDYE6P0CI01 402 aa18.7■□□□□ 0.58
TRPS1-204ENST00000422939 SPDYE2Q495Y8 402 aa18.7■□□□□ 0.58
TRPS1-204ENST00000422939 AKT1S1Q96B36 256 aa18.63■□□□□ 0.57
TRPS1-204ENST00000422939 ZNF692Q9BU19 519 aaPredicted RBP18.58■□□□□ 0.56
TRPS1-204ENST00000422939 SSUH2Q9Y2M2 353 aa18.51■□□□□ 0.55
TRPS1-204ENST00000422939 REM2Q8IYK8 340 aaPredicted RBP18.44■□□□□ 0.54
TRPS1-204ENST00000422939 SPDYE4A6NLX3 237 aa18.42■□□□□ 0.54
TRPS1-204ENST00000422939 PABPN1Q86U42 306 aaKnown RBP eCLIP18.31■□□□□ 0.52
TRPS1-204ENST00000422939 CHRDL2Q6WN34 429 aa18.22■□□□□ 0.51
TRPS1-204ENST00000422939 PITPNM1O00562 1244 aa18.21■□□□□ 0.51
TRPS1-204ENST00000422939 SPDYE1Q8NFV5 336 aaPredicted RBP18.2■□□□□ 0.5
TRPS1-204ENST00000422939 FKBP8Q14318 412 aa18.17■□□□□ 0.5
TRPS1-204ENST00000422939 CLEC11AQ9Y240 323 aa18.11■□□□□ 0.49
TRPS1-204ENST00000422939 PROM2Q8N271 834 aa18.1■□□□□ 0.49
TRPS1-204ENST00000422939 STAG3Q9UJ98 1225 aa17.99■□□□□ 0.47
TRPS1-204ENST00000422939 FXR2P51116 673 aaKnown RBP eCLIP17.95■□□□□ 0.46
TRPS1-204ENST00000422939 PRR29P0C7W0 189 aa17.94■□□□□ 0.46
TRPS1-204ENST00000422939 POTEHQ6S545 545 aa17.94■□□□□ 0.46
TRPS1-204ENST00000422939 PIP4P2Q8N4L2 257 aa17.93■□□□□ 0.46
TRPS1-204ENST00000422939 PRKAR2AP13861 404 aaKnown RBP17.76■□□□□ 0.43
TRPS1-204ENST00000422939 CHADLQ6NUI6 762 aa17.69■□□□□ 0.42
TRPS1-204ENST00000422939 FBXO3Q9UK99 471 aa17.65■□□□□ 0.42
TRPS1-204ENST00000422939 CREBZFQ9NS37 354 aa17.63■□□□□ 0.41
TRPS1-204ENST00000422939 FARP1Q9Y4F1 1045 aaPredicted RBP17.52■□□□□ 0.4
TRPS1-204ENST00000422939 MIER1Q8N108 512 aa17.51■□□□□ 0.39
TRPS1-204ENST00000422939 PLEKHG5O94827 1062 aa17.45■□□□□ 0.38
TRPS1-204ENST00000422939 PLCD3Q8N3E9 789 aa17.45■□□□□ 0.38
TRPS1-204ENST00000422939 HAX1O00165 279 aa17.43■□□□□ 0.38
TRPS1-204ENST00000422939 MNX1P50219 401 aaPredicted RBP17.43■□□□□ 0.38
TRPS1-204ENST00000422939 VASPP50552 380 aaPredicted RBP17.38■□□□□ 0.37
TRPS1-204ENST00000422939 NPM1P06748 294 aaKnown RBP eCLIP17.36■□□□□ 0.37
TRPS1-204ENST00000422939 C19orf67A6NJJ6 358 aa17.34■□□□□ 0.37
TRPS1-204ENST00000422939 ZBTB47Q9UFB7 747 aaPredicted RBP17.29■□□□□ 0.36
TRPS1-204ENST00000422939 EVX2Q03828 476 aa17.25■□□□□ 0.35
TRPS1-204ENST00000422939 CD44P16070 742 aaKnown RBP17.23■□□□□ 0.35
TRPS1-204ENST00000422939 KLHL34Q8N239 644 aa17.15■□□□□ 0.34
TRPS1-204ENST00000422939 IFNLR1Q8IU57 520 aaPredicted RBP17.14■□□□□ 0.33
TRPS1-204ENST00000422939 SP7Q8TDD2 431 aaPredicted RBP17.14■□□□□ 0.33
TRPS1-204ENST00000422939 PAK3O75914 559 aaPredicted RBP17.11■□□□□ 0.33
TRPS1-204ENST00000422939 ZRANB1Q9UGI0 708 aa17.1■□□□□ 0.33
TRPS1-204ENST00000422939 NUBP1P53384 320 aa17.09■□□□□ 0.33
TRPS1-204ENST00000422939 RASEFQ8IZ41 740 aa17.06■□□□□ 0.32
TRPS1-204ENST00000422939 TSPYL2Q9H2G4 693 aaPredicted RBP17.03■□□□□ 0.32
TRPS1-204ENST00000422939 ZNF579Q8NAF0 562 aaKnown RBP17.01■□□□□ 0.31
TRPS1-204ENST00000422939 SPOCK2Q92563 424 aa16.98■□□□□ 0.31
TRPS1-204ENST00000422939 CLCN6P51797 869 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms