RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 SULF1Q8IWU6 871 aa7.63□□□□□ -1.19
CDC42EP3-202ENST00000422687 CCDC82Q8N4S0 544 aa7.63□□□□□ -1.19
CDC42EP3-202ENST00000422687 PCDHB3Q9Y5E6 796 aa7.63□□□□□ -1.19
CDC42EP3-202ENST00000422687 DIP2CQ9Y2E4 1556 aa7.63□□□□□ -1.19
CDC42EP3-202ENST00000422687 SETD1BQ9UPS6 1966 aaKnown RBP7.62□□□□□ -1.19
CDC42EP3-202ENST00000422687 IQSEC2Q5JU85 1478 aa7.62□□□□□ -1.19
CDC42EP3-202ENST00000422687 DISP3Q9P2K9 1392 aa7.62□□□□□ -1.19
CDC42EP3-202ENST00000422687 TMEM259Q4ZIN3 620 aa7.62□□□□□ -1.19
CDC42EP3-202ENST00000422687 RSPH4AQ5TD94 716 aa7.62□□□□□ -1.19
CDC42EP3-202ENST00000422687 RSBN1LQ6PCB5 846 aaPredicted RBP7.62□□□□□ -1.19
CDC42EP3-202ENST00000422687 RIC3Q7Z5B4 369 aa7.62□□□□□ -1.19
CDC42EP3-202ENST00000422687 CDK11AQ9UQ88 783 aaPredicted RBP7.62□□□□□ -1.19
CDC42EP3-202ENST00000422687 COG6Q9Y2V7 657 aa7.62□□□□□ -1.19
CDC42EP3-202ENST00000422687 LTBP4Q8N2S1 1624 aa7.62□□□□□ -1.19
CDC42EP3-202ENST00000422687 ARHGAP35Q9NRY4 1499 aa7.62□□□□□ -1.19
CDC42EP3-202ENST00000422687 TRAPPC8Q9Y2L5 1435 aa7.61□□□□□ -1.19
CDC42EP3-202ENST00000422687 MYO5CQ9NQX4 1742 aa7.61□□□□□ -1.19
CDC42EP3-202ENST00000422687 KIF14Q15058 1648 aa7.61□□□□□ -1.19
CDC42EP3-202ENST00000422687 ZNF516Q92618 1163 aa7.61□□□□□ -1.19
CDC42EP3-202ENST00000422687 SNRKQ9NRH2 765 aa7.61□□□□□ -1.19
CDC42EP3-202ENST00000422687 NCOA1Q15788 1441 aa7.61□□□□□ -1.19
CDC42EP3-202ENST00000422687 RAD21O60216 631 aa7.6□□□□□ -1.19
CDC42EP3-202ENST00000422687 ZPR1O75312 459 aa7.6□□□□□ -1.19
CDC42EP3-202ENST00000422687 CNTLNQ9NXG0 1405 aa7.6□□□□□ -1.19
CDC42EP3-202ENST00000422687 ABCA6Q8N139 1617 aa7.6□□□□□ -1.19
CDC42EP3-202ENST00000422687 ARHGAP5Q13017 1502 aa7.59□□□□□ -1.19
CDC42EP3-202ENST00000422687 COPS2P61201 443 aa7.59□□□□□ -1.19
CDC42EP3-202ENST00000422687 BLOC1S3Q6QNY0 202 aa7.59□□□□□ -1.19
CDC42EP3-202ENST00000422687 MTMR14Q8NCE2 650 aa7.59□□□□□ -1.19
CDC42EP3-202ENST00000422687 CLIP1P30622 1438 aa7.59□□□□□ -1.19
CDC42EP3-202ENST00000422687 NPATQ14207 1427 aa7.59□□□□□ -1.19
CDC42EP3-202ENST00000422687 ABCC1P33527 1531 aa7.58□□□□□ -1.2
CDC42EP3-202ENST00000422687 C3P01024 1663 aa7.58□□□□□ -1.2
CDC42EP3-202ENST00000422687 MOXD2PA6NHM9 499 aa7.58□□□□□ -1.2
CDC42EP3-202ENST00000422687 LILRB3O75022 631 aa7.58□□□□□ -1.2
CDC42EP3-202ENST00000422687 ATP1B4Q9UN42 357 aaPredicted RBP7.58□□□□□ -1.2
CDC42EP3-202ENST00000422687 DDX11L8A8MPP1 907 aa7.57□□□□□ -1.2
CDC42EP3-202ENST00000422687 NUTM1Q86Y26 1132 aa7.57□□□□□ -1.2
CDC42EP3-202ENST00000422687 RDH13Q8NBN7 331 aa7.57□□□□□ -1.2
CDC42EP3-202ENST00000422687 ZNF777Q9ULD5 760 aaPredicted RBP7.57□□□□□ -1.2
CDC42EP3-202ENST00000422687 SPATA31D1Q6ZQQ2 1576 aa7.57□□□□□ -1.2
CDC42EP3-202ENST00000422687 CDC42BPBQ9Y5S2 1711 aa7.56□□□□□ -1.2
CDC42EP3-202ENST00000422687 GCGRP47871 477 aa7.56□□□□□ -1.2
CDC42EP3-202ENST00000422687 QPCTQ16769 361 aa7.56□□□□□ -1.2
CDC42EP3-202ENST00000422687 NKX2-3Q8TAU0 364 aa7.56□□□□□ -1.2
CDC42EP3-202ENST00000422687 KIDINS220Q9ULH0 1771 aa7.56□□□□□ -1.2
CDC42EP3-202ENST00000422687 PREX2Q70Z35 1606 aa7.56□□□□□ -1.2
CDC42EP3-202ENST00000422687 CASKIN1Q8WXD9 1431 aa7.55□□□□□ -1.2
CDC42EP3-202ENST00000422687 NR1I2O75469 434 aa7.55□□□□□ -1.2
CDC42EP3-202ENST00000422687 PPP1R18Q6NYC8 613 aa7.55□□□□□ -1.2
CDC42EP3-202ENST00000422687 ZMYM3Q14202 1370 aa7.55□□□□□ -1.2
CDC42EP3-202ENST00000422687 PLA2R1Q13018 1463 aa7.55□□□□□ -1.2
CDC42EP3-202ENST00000422687 NDUFV2P19404 249 aa7.54□□□□□ -1.2
CDC42EP3-202ENST00000422687 TRIM26Q12899 539 aaPredicted RBP7.54□□□□□ -1.2
CDC42EP3-202ENST00000422687 PRPF38BQ5VTL8 546 aaKnown RBP7.54□□□□□ -1.2
CDC42EP3-202ENST00000422687 ESF1Q9H501 851 aaKnown RBP7.54□□□□□ -1.2
CDC42EP3-202ENST00000422687 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.54□□□□□ -1.2
CDC42EP3-202ENST00000422687 PODXL2Q9NZ53 605 aa7.54□□□□□ -1.2
CDC42EP3-202ENST00000422687 SERPINA10Q9UK55 444 aa7.54□□□□□ -1.2
CDC42EP3-202ENST00000422687 PCDHB15Q9Y5E8 787 aa7.54□□□□□ -1.2
CDC42EP3-202ENST00000422687 LRRIQ1Q96JM4 1722 aa7.54□□□□□ -1.2
CDC42EP3-202ENST00000422687 TCOF1Q13428 1488 aaKnown RBP7.54□□□□□ -1.2
CDC42EP3-202ENST00000422687 CCDC18Q5T9S5 1454 aa7.54□□□□□ -1.2
CDC42EP3-202ENST00000422687 SAMD9LQ8IVG5 1584 aa7.54□□□□□ -1.2
CDC42EP3-202ENST00000422687 MROH2AA6NES4 1674 aa7.54□□□□□ -1.2
CDC42EP3-202ENST00000422687 ITSN2Q9NZM3 1697 aa7.54□□□□□ -1.2
CDC42EP3-202ENST00000422687 KIAA1107Q9UPP5 1409 aa7.53□□□□□ -1.2
CDC42EP3-202ENST00000422687 CAMSAP1Q5T5Y3 1602 aa7.53□□□□□ -1.2
CDC42EP3-202ENST00000422687 TLL1O43897 1013 aa7.53□□□□□ -1.2
CDC42EP3-202ENST00000422687 ATP6V1AP38606 617 aa7.53□□□□□ -1.2
CDC42EP3-202ENST00000422687 USP46P62068 366 aa7.53□□□□□ -1.2
CDC42EP3-202ENST00000422687 FUT2Q10981 343 aa7.53□□□□□ -1.2
CDC42EP3-202ENST00000422687 MORN1Q5T089 497 aa7.53□□□□□ -1.2
CDC42EP3-202ENST00000422687 PLXNC1O60486 1568 aa7.53□□□□□ -1.2
CDC42EP3-202ENST00000422687 ZNF335Q9H4Z2 1342 aaPredicted RBP7.52□□□□□ -1.2
CDC42EP3-202ENST00000422687 PTPRKQ15262 1439 aa7.52□□□□□ -1.2
CDC42EP3-202ENST00000422687 HOXA2O43364 376 aa7.52□□□□□ -1.21
CDC42EP3-202ENST00000422687 KDM4AO75164 1064 aa7.52□□□□□ -1.21
CDC42EP3-202ENST00000422687 ADH1BP00325 375 aa7.52□□□□□ -1.21
CDC42EP3-202ENST00000422687 HRCP23327 699 aa7.52□□□□□ -1.21
CDC42EP3-202ENST00000422687 GGCXP38435 758 aa7.52□□□□□ -1.21
CDC42EP3-202ENST00000422687 RTL5Q5HYW3 569 aaPredicted RBP7.52□□□□□ -1.21
CDC42EP3-202ENST00000422687 GPATCH8Q9UKJ3 1502 aaKnown RBP7.52□□□□□ -1.21
CDC42EP3-202ENST00000422687 PUS10Q3MIT2 529 aaKnown RBP7.51□□□□□ -1.21
CDC42EP3-202ENST00000422687 SCUBE3Q8IX30 993 aa7.51□□□□□ -1.21
CDC42EP3-202ENST00000422687 CCDC97Q96F63 343 aaPredicted RBP7.51□□□□□ -1.21
CDC42EP3-202ENST00000422687 GDPD2Q9HCC8 539 aa7.51□□□□□ -1.21
CDC42EP3-202ENST00000422687 ZNF330Q9Y3S2 320 aaPredicted RBP7.51□□□□□ -1.21
CDC42EP3-202ENST00000422687 SALL2Q9Y467 1007 aaPredicted RBP7.51□□□□□ -1.21
CDC42EP3-202ENST00000422687 SPAG9O60271 1321 aaKnown RBP7.51□□□□□ -1.21
CDC42EP3-202ENST00000422687 ZNF142P52746 1687 aaPredicted RBP7.51□□□□□ -1.21
CDC42EP3-202ENST00000422687 A2MP01023 1474 aa7.5□□□□□ -1.21
CDC42EP3-202ENST00000422687 CDC42BPAQ5VT25 1732 aa7.5□□□□□ -1.21
CDC42EP3-202ENST00000422687 UBAP1LF5GYI3 381 aa7.5□□□□□ -1.21
CDC42EP3-202ENST00000422687 USP17L8P0C7I0 530 aa7.5□□□□□ -1.21
CDC42EP3-202ENST00000422687 CSPP1Q1MSJ5 1256 aa7.5□□□□□ -1.21
CDC42EP3-202ENST00000422687 Q6ZNB5 142 aa7.5□□□□□ -1.21
CDC42EP3-202ENST00000422687 CABLES1Q8TDN4 633 aa7.5□□□□□ -1.21
CDC42EP3-202ENST00000422687 SYCP2Q9BX26 1530 aa7.5□□□□□ -1.21
CDC42EP3-202ENST00000422687 PLEKHH2Q8IVE3 1493 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms