RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 KCNK17Q96T54 332 aa11.03□□□□□ -0.64
AC012560.1-202ENST00000421324 SLAIN2Q9P270 581 aa11.03□□□□□ -0.64
AC012560.1-202ENST00000421324 NWD1Q149M9 1564 aa11.03□□□□□ -0.64
AC012560.1-202ENST00000421324 SETBP1Q9Y6X0 1596 aa11.03□□□□□ -0.64
AC012560.1-202ENST00000421324 SPATA31E1Q6ZUB1 1445 aa11.02□□□□□ -0.64
AC012560.1-202ENST00000421324 ADGRF5Q8IZF2 1346 aa11.02□□□□□ -0.65
AC012560.1-202ENST00000421324 PTPRUQ92729 1446 aa11.01□□□□□ -0.65
AC012560.1-202ENST00000421324 TYW1BQ6NUM6 668 aa11.01□□□□□ -0.65
AC012560.1-202ENST00000421324 KCNV2Q8TDN2 545 aa11.01□□□□□ -0.65
AC012560.1-202ENST00000421324 TK2O00142 265 aa11□□□□□ -0.65
AC012560.1-202ENST00000421324 ADGRD1Q6QNK2 874 aa11□□□□□ -0.65
AC012560.1-202ENST00000421324 FBXW7Q969H0 707 aa11□□□□□ -0.65
AC012560.1-202ENST00000421324 EPAS1Q99814 870 aa11□□□□□ -0.65
AC012560.1-202ENST00000421324 FAM135BQ49AJ0 1406 aa11□□□□□ -0.65
AC012560.1-202ENST00000421324 PTPREP23469 700 aa10.99□□□□□ -0.65
AC012560.1-202ENST00000421324 TRIM26Q12899 539 aaPredicted RBP10.99□□□□□ -0.65
AC012560.1-202ENST00000421324 DDX12PQ92771 950 aa10.99□□□□□ -0.65
AC012560.1-202ENST00000421324 STAC3Q96MF2 364 aa10.99□□□□□ -0.65
AC012560.1-202ENST00000421324 KDM2AQ9Y2K7 1162 aa10.99□□□□□ -0.65
AC012560.1-202ENST00000421324 NRXN3Q9Y4C0 1643 aa10.98□□□□□ -0.65
AC012560.1-202ENST00000421324 XIRP1Q702N8 1843 aaKnown RBP10.98□□□□□ -0.65
AC012560.1-202ENST00000421324 HRO43593 1189 aa10.98□□□□□ -0.65
AC012560.1-202ENST00000421324 HAP1P54257 671 aaPredicted RBP10.98□□□□□ -0.65
AC012560.1-202ENST00000421324 DCAF11Q8TEB1 546 aa10.98□□□□□ -0.65
AC012560.1-202ENST00000421324 ARHGEF1Q92888 912 aaKnown RBP10.98□□□□□ -0.65
AC012560.1-202ENST00000421324 SLC4A5Q9BY07 1137 aa10.98□□□□□ -0.65
AC012560.1-202ENST00000421324 STK26Q9P289 416 aa10.98□□□□□ -0.65
AC012560.1-202ENST00000421324 ALKQ9UM73 1620 aa10.98□□□□□ -0.65
AC012560.1-202ENST00000421324 TMEM132EQ6IEE7 984 aa10.97□□□□□ -0.65
AC012560.1-202ENST00000421324 C14orf93Q9H972 538 aaKnown RBP10.97□□□□□ -0.65
AC012560.1-202ENST00000421324 PPLO60437 1756 aa10.97□□□□□ -0.65
AC012560.1-202ENST00000421324 CFAP70Q5T0N1 1121 aa10.96□□□□□ -0.65
AC012560.1-202ENST00000421324 DISP3Q9P2K9 1392 aa10.95□□□□□ -0.66
AC012560.1-202ENST00000421324 ZBED2Q9BTP6 218 aa10.95□□□□□ -0.66
AC012560.1-202ENST00000421324 VPS9D1Q9Y2B5 631 aa10.95□□□□□ -0.66
AC012560.1-202ENST00000421324 DHX57Q6P158 1386 aaKnown RBP10.94□□□□□ -0.66
AC012560.1-202ENST00000421324 ROBO2Q9HCK4 1378 aa10.94□□□□□ -0.66
AC012560.1-202ENST00000421324 PIK3C2GO75747 1445 aa10.93□□□□□ -0.66
AC012560.1-202ENST00000421324 LRPPRCP42704 1394 aaKnown RBP10.93□□□□□ -0.66
AC012560.1-202ENST00000421324 ABCC11Q96J66 1382 aa10.93□□□□□ -0.66
AC012560.1-202ENST00000421324 XRN1Q8IZH2 1706 aaKnown RBP10.93□□□□□ -0.66
AC012560.1-202ENST00000421324 COL9A1P20849 921 aa10.93□□□□□ -0.66
AC012560.1-202ENST00000421324 PRIM1P49642 420 aaKnown RBP10.93□□□□□ -0.66
AC012560.1-202ENST00000421324 C6orf132Q5T0Z8 1188 aa10.93□□□□□ -0.66
AC012560.1-202ENST00000421324 DCCP43146 1447 aa10.92□□□□□ -0.66
AC012560.1-202ENST00000421324 PTCH1Q13635 1447 aa10.92□□□□□ -0.66
AC012560.1-202ENST00000421324 PPP1R3GB7ZBB8 358 aa10.92□□□□□ -0.66
AC012560.1-202ENST00000421324 EN1Q05925 392 aaPredicted RBP10.92□□□□□ -0.66
AC012560.1-202ENST00000421324 WAPLQ7Z5K2 1190 aa10.92□□□□□ -0.66
AC012560.1-202ENST00000421324 SIRT1Q96EB6 747 aa10.92□□□□□ -0.66
AC012560.1-202ENST00000421324 MYOM2P54296 1465 aa10.92□□□□□ -0.66
AC012560.1-202ENST00000421324 ADGRL3Q9HAR2 1447 aa10.92□□□□□ -0.66
AC012560.1-202ENST00000421324 NBR1Q14596 966 aa10.91□□□□□ -0.66
AC012560.1-202ENST00000421324 BRINP3Q76B58 766 aa10.91□□□□□ -0.66
AC012560.1-202ENST00000421324 RNF166Q96A37 237 aaPredicted RBP10.91□□□□□ -0.66
AC012560.1-202ENST00000421324 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.91□□□□□ -0.66
AC012560.1-202ENST00000421324 YTHDC2Q9H6S0 1430 aaKnown RBP10.91□□□□□ -0.66
AC012560.1-202ENST00000421324 IFT172Q9UG01 1749 aa10.9□□□□□ -0.66
AC012560.1-202ENST00000421324 ROBO1Q9Y6N7 1651 aa10.9□□□□□ -0.66
AC012560.1-202ENST00000421324 NRXN1Q9ULB1 1477 aa10.9□□□□□ -0.66
AC012560.1-202ENST00000421324 OSBPP22059 807 aa10.9□□□□□ -0.66
AC012560.1-202ENST00000421324 NEUROD1Q13562 356 aa10.9□□□□□ -0.66
AC012560.1-202ENST00000421324 POGKQ9P215 609 aa10.9□□□□□ -0.66
AC012560.1-202ENST00000421324 PRAG1Q86YV5 1406 aa10.9□□□□□ -0.66
AC012560.1-202ENST00000421324 GRXCR2A6NFK2 248 aa10.89□□□□□ -0.67
AC012560.1-202ENST00000421324 BHMG1C9JSJ3 638 aaPredicted RBP10.89□□□□□ -0.67
AC012560.1-202ENST00000421324 SETD1AO15047 1707 aaKnown RBP10.89□□□□□ -0.67
AC012560.1-202ENST00000421324 TECPR2O15040 1411 aa10.88□□□□□ -0.67
AC012560.1-202ENST00000421324 MST1RQ04912 1400 aa10.88□□□□□ -0.67
AC012560.1-202ENST00000421324 PRAM1Q96QH2 718 aa10.88□□□□□ -0.67
AC012560.1-202ENST00000421324 SIN3AQ96ST3 1273 aa10.88□□□□□ -0.67
AC012560.1-202ENST00000421324 TRAK1Q9UPV9 953 aa10.88□□□□□ -0.67
AC012560.1-202ENST00000421324 SAFB2Q14151 953 aaKnown RBP eCLIP10.87□□□□□ -0.67
AC012560.1-202ENST00000421324 TSR1Q2NL82 804 aaKnown RBP10.87□□□□□ -0.67
AC012560.1-202ENST00000421324 ESCO1Q5FWF5 840 aa10.87□□□□□ -0.67
AC012560.1-202ENST00000421324 ORAI2Q96SN7 254 aa10.87□□□□□ -0.67
AC012560.1-202ENST00000421324 L3MBTL2Q969R5 705 aa10.86□□□□□ -0.67
AC012560.1-202ENST00000421324 LRRC59Q96AG4 307 aaKnown RBP10.86□□□□□ -0.67
AC012560.1-202ENST00000421324 JCADQ9P266 1359 aa10.86□□□□□ -0.67
AC012560.1-202ENST00000421324 PLEKHH1Q9ULM0 1364 aa10.86□□□□□ -0.67
AC012560.1-202ENST00000421324 C1orf167Q5SNV9 1468 aa10.86□□□□□ -0.67
AC012560.1-202ENST00000421324 LAMC1P11047 1609 aa10.85□□□□□ -0.67
AC012560.1-202ENST00000421324 NUTM2FA1L443 756 aa10.85□□□□□ -0.67
AC012560.1-202ENST00000421324 MLLT3P42568 568 aaPredicted RBP10.85□□□□□ -0.67
AC012560.1-202ENST00000421324 PROX2Q3B8N5 592 aa10.85□□□□□ -0.67
AC012560.1-202ENST00000421324 VSIG10Q8N0Z9 540 aa10.85□□□□□ -0.67
AC012560.1-202ENST00000421324 ASXL1Q8IXJ9 1541 aa10.84□□□□□ -0.67
AC012560.1-202ENST00000421324 MAP3K7O43318 606 aa10.84□□□□□ -0.67
AC012560.1-202ENST00000421324 DDX17Q92841 729 aaKnown RBP10.84□□□□□ -0.67
AC012560.1-202ENST00000421324 PHLPP1O60346 1717 aa10.84□□□□□ -0.67
AC012560.1-202ENST00000421324 NALCNQ8IZF0 1738 aa10.84□□□□□ -0.67
AC012560.1-202ENST00000421324 SPATA31A6Q5VVP1 1343 aa10.83□□□□□ -0.68
AC012560.1-202ENST00000421324 MED1Q15648 1581 aaPredicted RBP10.82□□□□□ -0.68
AC012560.1-202ENST00000421324 FOXO3O43524 673 aa10.82□□□□□ -0.68
AC012560.1-202ENST00000421324 ONECUT3O60422 494 aaPredicted RBP10.82□□□□□ -0.68
AC012560.1-202ENST00000421324 RABGEF1Q9UJ41 708 aa10.82□□□□□ -0.68
AC012560.1-202ENST00000421324 MINK1Q8N4C8 1332 aaPredicted RBP10.82□□□□□ -0.68
AC012560.1-202ENST00000421324 AHDC1Q5TGY3 1603 aaPredicted RBP10.81□□□□□ -0.68
AC012560.1-202ENST00000421324 NUTM2BA6NNL0 878 aaPredicted RBP10.81□□□□□ -0.68
AC012560.1-202ENST00000421324 NUTM2EB1AL46 878 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms