RNA–Protein interactions for RNA: ENST00000420831.1

SEMA3F-204, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-204ENST00000420831 HDGFL2Q7Z4V5 671 aaPredicted RBP11.47□□□□□ -0.57
SEMA3F-204ENST00000420831 UPF1Q92900 1129 aaKnown RBP eCLIP11.47□□□□□ -0.57
SEMA3F-204ENST00000420831 POLR3GLQ9BT43 218 aa11.47□□□□□ -0.57
SEMA3F-204ENST00000420831 MON2Q7Z3U7 1717 aa11.46□□□□□ -0.57
SEMA3F-204ENST00000420831 EDC4Q6P2E9 1401 aaKnown RBP11.46□□□□□ -0.57
SEMA3F-204ENST00000420831 SPATA31A5Q5VU36 1347 aa11.46□□□□□ -0.57
SEMA3F-204ENST00000420831 SPATA31A7Q8IWB4 1347 aa11.46□□□□□ -0.57
SEMA3F-204ENST00000420831 FAM182BQ5T319 152 aa11.46□□□□□ -0.57
SEMA3F-204ENST00000420831 ARHGEF25Q86VW2 580 aa11.46□□□□□ -0.57
SEMA3F-204ENST00000420831 SEPT12Q8IYM1 358 aa11.46□□□□□ -0.57
SEMA3F-204ENST00000420831 TERF2IPQ9NYB0 399 aa11.46□□□□□ -0.57
SEMA3F-204ENST00000420831 USP35Q9P2H5 1018 aa11.46□□□□□ -0.57
SEMA3F-204ENST00000420831 COL14A1Q05707 1796 aaKnown RBP11.46□□□□□ -0.58
SEMA3F-204ENST00000420831 NFAT5O94916 1531 aa11.45□□□□□ -0.58
SEMA3F-204ENST00000420831 USP31Q70CQ4 1352 aa11.45□□□□□ -0.58
SEMA3F-204ENST00000420831 ANKRD36BQ8N2N9 1353 aa11.45□□□□□ -0.58
SEMA3F-204ENST00000420831 ONECUT3O60422 494 aaPredicted RBP11.45□□□□□ -0.58
SEMA3F-204ENST00000420831 ABCB7O75027 752 aa11.45□□□□□ -0.58
SEMA3F-204ENST00000420831 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.45□□□□□ -0.58
SEMA3F-204ENST00000420831 LMO7Q8WWI1 1683 aa11.45□□□□□ -0.58
SEMA3F-204ENST00000420831 SPATA31A1Q5TZJ5 1347 aa11.44□□□□□ -0.58
SEMA3F-204ENST00000420831 FYB1O15117 783 aa11.44□□□□□ -0.58
SEMA3F-204ENST00000420831 GGNBP2Q9H3C7 697 aa11.44□□□□□ -0.58
SEMA3F-204ENST00000420831 OVOS2A0A0J9YW53 1432 aa11.43□□□□□ -0.58
SEMA3F-204ENST00000420831 OVOS2Q6IE36 1432 aa11.43□□□□□ -0.58
SEMA3F-204ENST00000420831 NWD2Q9ULI1 1742 aa11.43□□□□□ -0.58
SEMA3F-204ENST00000420831 MYOM1P52179 1685 aa11.43□□□□□ -0.58
SEMA3F-204ENST00000420831 COL5A2P05997 1499 aaPredicted RBP11.43□□□□□ -0.58
SEMA3F-204ENST00000420831 AATKQ6ZMQ8 1374 aa11.42□□□□□ -0.58
SEMA3F-204ENST00000420831 COL18A1P39060 1754 aa11.42□□□□□ -0.58
SEMA3F-204ENST00000420831 EVA1CP58658 441 aa11.42□□□□□ -0.58
SEMA3F-204ENST00000420831 NINLQ9Y2I6 1382 aa11.41□□□□□ -0.58
SEMA3F-204ENST00000420831 RRS1Q15050 365 aaKnown RBP11.41□□□□□ -0.58
SEMA3F-204ENST00000420831 NSD3Q9BZ95 1437 aa11.41□□□□□ -0.58
SEMA3F-204ENST00000420831 KIF7Q2M1P5 1343 aa11.4□□□□□ -0.58
SEMA3F-204ENST00000420831 A0A0G2JS52 829 aa11.4□□□□□ -0.58
SEMA3F-204ENST00000420831 SLC24A1O60721 1099 aa11.4□□□□□ -0.58
SEMA3F-204ENST00000420831 MYT1Q01538 1121 aa11.4□□□□□ -0.58
SEMA3F-204ENST00000420831 KCNH5Q8NCM2 988 aa11.4□□□□□ -0.58
SEMA3F-204ENST00000420831 PANK3Q9H999 370 aa11.4□□□□□ -0.58
SEMA3F-204ENST00000420831 MAP3K19Q56UN5 1328 aa11.39□□□□□ -0.59
SEMA3F-204ENST00000420831 CDCA8Q53HL2 280 aa11.39□□□□□ -0.59
SEMA3F-204ENST00000420831 BRWD3Q6RI45 1802 aa11.38□□□□□ -0.59
SEMA3F-204ENST00000420831 SPDYE4A6NLX3 237 aa11.38□□□□□ -0.59
SEMA3F-204ENST00000420831 KRT27Q7Z3Y8 459 aa11.38□□□□□ -0.59
SEMA3F-204ENST00000420831 COG3Q96JB2 828 aa11.38□□□□□ -0.59
SEMA3F-204ENST00000420831 USP54Q70EL1 1684 aa11.37□□□□□ -0.59
SEMA3F-204ENST00000420831 THSD7AQ9UPZ6 1657 aa11.37□□□□□ -0.59
SEMA3F-204ENST00000420831 TOM1L2Q6ZVM7 507 aa11.37□□□□□ -0.59
SEMA3F-204ENST00000420831 TCP11L2Q8N4U5 519 aa11.37□□□□□ -0.59
SEMA3F-204ENST00000420831 LTV1Q96GA3 475 aaPredicted RBP11.37□□□□□ -0.59
SEMA3F-204ENST00000420831 WDR17Q8IZU2 1322 aa11.36□□□□□ -0.59
SEMA3F-204ENST00000420831 CRB1P82279 1406 aa11.36□□□□□ -0.59
SEMA3F-204ENST00000420831 DSG3P32926 999 aa11.36□□□□□ -0.59
SEMA3F-204ENST00000420831 BARGINQ6ZT62 677 aa11.36□□□□□ -0.59
SEMA3F-204ENST00000420831 ANKRD24Q8TF21 1146 aa11.36□□□□□ -0.59
SEMA3F-204ENST00000420831 EMILIN1Q9Y6C2 1016 aa11.36□□□□□ -0.59
SEMA3F-204ENST00000420831 RGPD5Q99666 1765 aa11.36□□□□□ -0.59
SEMA3F-204ENST00000420831 ERBB3P21860 1342 aa11.35□□□□□ -0.59
SEMA3F-204ENST00000420831 WASHC2AQ641Q2 1341 aa11.35□□□□□ -0.59
SEMA3F-204ENST00000420831 CSB-PGBD3P0DP91 1061 aa11.35□□□□□ -0.59
SEMA3F-204ENST00000420831 HOXC9P31274 260 aa11.35□□□□□ -0.59
SEMA3F-204ENST00000420831 PTF1AQ7RTS3 328 aa11.35□□□□□ -0.59
SEMA3F-204ENST00000420831 DEFB132Q7Z7B7 95 aa11.35□□□□□ -0.59
SEMA3F-204ENST00000420831 IP6K1Q92551 441 aa11.35□□□□□ -0.59
SEMA3F-204ENST00000420831 TNNT2P45379 298 aaPredicted RBP11.34□□□□□ -0.59
SEMA3F-204ENST00000420831 HSP90AB2PQ58FF8 381 aa11.34□□□□□ -0.59
SEMA3F-204ENST00000420831 CARD10Q9BWT7 1032 aa11.33□□□□□ -0.6
SEMA3F-204ENST00000420831 NLRP2Q9NX02 1062 aa11.33□□□□□ -0.6
SEMA3F-204ENST00000420831 DISP2A7MBM2 1401 aa11.33□□□□□ -0.6
SEMA3F-204ENST00000420831 PEAK1Q9H792 1746 aa11.32□□□□□ -0.6
SEMA3F-204ENST00000420831 CCDC7Q96M83 1385 aa11.32□□□□□ -0.6
SEMA3F-204ENST00000420831 PER1O15534 1290 aaPredicted RBP11.32□□□□□ -0.6
SEMA3F-204ENST00000420831 AMPHP49418 695 aa11.32□□□□□ -0.6
SEMA3F-204ENST00000420831 USHBP1Q8N6Y0 703 aa11.32□□□□□ -0.6
SEMA3F-204ENST00000420831 THRAP3Q9Y2W1 955 aaKnown RBP11.32□□□□□ -0.6
SEMA3F-204ENST00000420831 LTN1O94822 1766 aa11.31□□□□□ -0.6
SEMA3F-204ENST00000420831 CNGB1Q14028 1251 aaPredicted RBP11.31□□□□□ -0.6
SEMA3F-204ENST00000420831 NBPF6Q5VWK0 638 aa11.31□□□□□ -0.6
SEMA3F-204ENST00000420831 MARCH10Q8NA82 808 aaPredicted RBP11.31□□□□□ -0.6
SEMA3F-204ENST00000420831 NBPF4Q96M43 638 aa11.31□□□□□ -0.6
SEMA3F-204ENST00000420831 POLKQ9UBT6 870 aa11.31□□□□□ -0.6
SEMA3F-204ENST00000420831 ZBTB12Q9Y330 459 aaPredicted RBP11.31□□□□□ -0.6
SEMA3F-204ENST00000420831 CGNL1Q0VF96 1302 aa11.31□□□□□ -0.6
SEMA3F-204ENST00000420831 PPM1GO15355 546 aaPredicted RBP11.3□□□□□ -0.6
SEMA3F-204ENST00000420831 TRIM37O94972 964 aa11.3□□□□□ -0.6
SEMA3F-204ENST00000420831 AMER1Q5JTC6 1135 aaPredicted RBP11.3□□□□□ -0.6
SEMA3F-204ENST00000420831 SRCAPQ6ZRS2 3230 aa11.3□□□□□ -0.6
SEMA3F-204ENST00000420831 PDE3BQ13370 1112 aa11.29□□□□□ -0.6
SEMA3F-204ENST00000420831 KIF20BQ96Q89 1820 aa11.28□□□□□ -0.6
SEMA3F-204ENST00000420831 LRRC37A3O60309 1634 aa11.28□□□□□ -0.6
SEMA3F-204ENST00000420831 BLMP54132 1417 aaPredicted RBP11.28□□□□□ -0.6
SEMA3F-204ENST00000420831 DDB1Q16531 1140 aa11.28□□□□□ -0.6
SEMA3F-204ENST00000420831 ABCC6O95255 1503 aa11.28□□□□□ -0.6
SEMA3F-204ENST00000420831 EN1Q05925 392 aaPredicted RBP11.27□□□□□ -0.61
SEMA3F-204ENST00000420831 CC2D1BQ5T0F9 858 aaKnown RBP11.27□□□□□ -0.61
SEMA3F-204ENST00000420831 MEGF6O75095 1541 aa11.26□□□□□ -0.61
SEMA3F-204ENST00000420831 KCNQ2O43526 872 aa11.26□□□□□ -0.61
SEMA3F-204ENST00000420831 ZEB1P37275 1124 aaPredicted RBP11.26□□□□□ -0.61
SEMA3F-204ENST00000420831 CACNB1Q02641 598 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms