RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 MARCH10Q8NA82 808 aaPredicted RBP13.59□□□□□ -0.23
TRIM39-206ENST00000420746 CFAP70Q5T0N1 1121 aa13.58□□□□□ -0.24
TRIM39-206ENST00000420746 PELP1Q8IZL8 1130 aaKnown RBP13.58□□□□□ -0.24
TRIM39-206ENST00000420746 ITSN1Q15811 1721 aa13.58□□□□□ -0.24
TRIM39-206ENST00000420746 COL24A1Q17RW2 1714 aa13.58□□□□□ -0.24
TRIM39-206ENST00000420746 POLR3AO14802 1390 aaPredicted RBP13.58□□□□□ -0.24
TRIM39-206ENST00000420746 APLP1P51693 650 aa13.57□□□□□ -0.24
TRIM39-206ENST00000420746 HIRIP3Q9BW71 556 aaPredicted RBP13.57□□□□□ -0.24
TRIM39-206ENST00000420746 PRELPP51888 382 aa13.56□□□□□ -0.24
TRIM39-206ENST00000420746 NUTM2GQ5VZR2 741 aa13.56□□□□□ -0.24
TRIM39-206ENST00000420746 TOPAZ1Q8N9V7 1692 aa13.56□□□□□ -0.24
TRIM39-206ENST00000420746 ADGRB1O14514 1584 aa13.55□□□□□ -0.24
TRIM39-206ENST00000420746 SLC34A2O95436 690 aa13.55□□□□□ -0.24
TRIM39-206ENST00000420746 YBX3P16989 372 aaKnown RBP eCLIP13.55□□□□□ -0.24
TRIM39-206ENST00000420746 DNAJC5GQ8N7S2 189 aa13.55□□□□□ -0.24
TRIM39-206ENST00000420746 NLGN2Q8NFZ4 835 aa13.55□□□□□ -0.24
TRIM39-206ENST00000420746 MINK1Q8N4C8 1332 aaPredicted RBP13.55□□□□□ -0.24
TRIM39-206ENST00000420746 AKAP12Q02952 1782 aa13.55□□□□□ -0.24
TRIM39-206ENST00000420746 GCP02774 474 aa13.54□□□□□ -0.24
TRIM39-206ENST00000420746 KLHL34Q8N239 644 aa13.54□□□□□ -0.24
TRIM39-206ENST00000420746 WNK3Q9BYP7 1800 aa13.53□□□□□ -0.24
TRIM39-206ENST00000420746 ZNF827Q17R98 1081 aa13.53□□□□□ -0.24
TRIM39-206ENST00000420746 ABTB2Q8N961 1025 aa13.53□□□□□ -0.24
TRIM39-206ENST00000420746 BRD4O60885 1362 aaPredicted RBP13.53□□□□□ -0.24
TRIM39-206ENST00000420746 QSER1Q2KHR3 1735 aa13.53□□□□□ -0.24
TRIM39-206ENST00000420746 TOM1L2Q6ZVM7 507 aa13.52□□□□□ -0.25
TRIM39-206ENST00000420746 NLRP13Q86W25 1043 aa13.52□□□□□ -0.25
TRIM39-206ENST00000420746 NUDT16Q96DE0 195 aaKnown RBP13.52□□□□□ -0.25
TRIM39-206ENST00000420746 NHSQ6T4R5 1651 aa13.52□□□□□ -0.25
TRIM39-206ENST00000420746 WDR17Q8IZU2 1322 aa13.51□□□□□ -0.25
TRIM39-206ENST00000420746 COL13A1Q5TAT6 717 aaPredicted RBP13.51□□□□□ -0.25
TRIM39-206ENST00000420746 ACEP12821 1306 aa13.5□□□□□ -0.25
TRIM39-206ENST00000420746 AKT1S1Q96B36 256 aa13.5□□□□□ -0.25
TRIM39-206ENST00000420746 TRAK1Q9UPV9 953 aa13.5□□□□□ -0.25
TRIM39-206ENST00000420746 TNS2Q63HR2 1409 aa13.49□□□□□ -0.25
TRIM39-206ENST00000420746 PLEKHG3A1L390 1219 aa13.49□□□□□ -0.25
TRIM39-206ENST00000420746 KIF3CO14782 793 aa13.49□□□□□ -0.25
TRIM39-206ENST00000420746 CAPN15O75808 1086 aa13.49□□□□□ -0.25
TRIM39-206ENST00000420746 EXOC5O00471 708 aa13.48□□□□□ -0.25
TRIM39-206ENST00000420746 TNS4Q8IZW8 715 aa13.48□□□□□ -0.25
TRIM39-206ENST00000420746 JMYQ8N9B5 988 aa13.48□□□□□ -0.25
TRIM39-206ENST00000420746 CCDC61Q9Y6R9 512 aa13.48□□□□□ -0.25
TRIM39-206ENST00000420746 PNPLA7Q6ZV29 1317 aa13.47□□□□□ -0.25
TRIM39-206ENST00000420746 CARD10Q9BWT7 1032 aa13.47□□□□□ -0.25
TRIM39-206ENST00000420746 SLIT3O75094 1523 aa13.46□□□□□ -0.25
TRIM39-206ENST00000420746 SLC27A3Q5K4L6 730 aa13.46□□□□□ -0.25
TRIM39-206ENST00000420746 ZNF526Q8TF50 670 aaPredicted RBP13.46□□□□□ -0.25
TRIM39-206ENST00000420746 LRRC4BQ9NT99 713 aa13.46□□□□□ -0.25
TRIM39-206ENST00000420746 ABCC6O95255 1503 aa13.45□□□□□ -0.26
TRIM39-206ENST00000420746 ARHGEF28Q8N1W1 1705 aaKnown RBP13.45□□□□□ -0.26
TRIM39-206ENST00000420746 PCDH10Q9P2E7 1040 aa13.45□□□□□ -0.26
TRIM39-206ENST00000420746 TRPM1Q7Z4N2 1603 aa13.45□□□□□ -0.26
TRIM39-206ENST00000420746 USP6P35125 1406 aa13.45□□□□□ -0.26
TRIM39-206ENST00000420746 CCDC7Q96M83 1385 aa13.45□□□□□ -0.26
TRIM39-206ENST00000420746 TOMM70O94826 608 aa13.44□□□□□ -0.26
TRIM39-206ENST00000420746 CD2APQ9Y5K6 639 aa13.44□□□□□ -0.26
TRIM39-206ENST00000420746 COL18A1P39060 1754 aa13.44□□□□□ -0.26
TRIM39-206ENST00000420746 KLRG1Q96E93 195 aa13.43□□□□□ -0.26
TRIM39-206ENST00000420746 CPSF1Q10570 1443 aaKnown RBP13.42□□□□□ -0.26
TRIM39-206ENST00000420746 CDK19Q9BWU1 502 aa13.42□□□□□ -0.26
TRIM39-206ENST00000420746 AXIN2Q9Y2T1 843 aa13.42□□□□□ -0.26
TRIM39-206ENST00000420746 BTAF1O14981 1849 aa13.41□□□□□ -0.26
TRIM39-206ENST00000420746 ACSBG1Q96GR2 724 aa13.41□□□□□ -0.26
TRIM39-206ENST00000420746 TFCP2L1Q9NZI6 479 aa13.41□□□□□ -0.26
TRIM39-206ENST00000420746 PPIP5K1Q6PFW1 1433 aa13.4□□□□□ -0.26
TRIM39-206ENST00000420746 WDR90Q96KV7 1748 aa13.4□□□□□ -0.26
TRIM39-206ENST00000420746 ZBTB7CA1YPR0 619 aa13.4□□□□□ -0.26
TRIM39-206ENST00000420746 MPHOSPH9Q99550 1183 aa13.4□□□□□ -0.26
TRIM39-206ENST00000420746 CSB-PGBD3P0DP91 1061 aa13.38□□□□□ -0.27
TRIM39-206ENST00000420746 NLRP6P59044 892 aa13.38□□□□□ -0.27
TRIM39-206ENST00000420746 ARHGEF25Q86VW2 580 aa13.38□□□□□ -0.27
TRIM39-206ENST00000420746 PCNTO95613 3336 aa13.38□□□□□ -0.27
TRIM39-206ENST00000420746 STAC3Q96MF2 364 aa13.37□□□□□ -0.27
TRIM39-206ENST00000420746 TUBGCP6Q96RT7 1819 aa13.36□□□□□ -0.27
TRIM39-206ENST00000420746 CICQ96RK0 1608 aaPredicted RBP13.36□□□□□ -0.27
TRIM39-206ENST00000420746 KCNH5Q8NCM2 988 aa13.36□□□□□ -0.27
TRIM39-206ENST00000420746 RBM46Q8TBY0 533 aaKnown RBP13.36□□□□□ -0.27
TRIM39-206ENST00000420746 WWC3Q9ULE0 1092 aa13.35□□□□□ -0.27
TRIM39-206ENST00000420746 IL2RBP14784 551 aa13.33□□□□□ -0.28
TRIM39-206ENST00000420746 FSTL1Q12841 308 aa13.33□□□□□ -0.28
TRIM39-206ENST00000420746 COL23A1Q86Y22 540 aaPredicted RBP13.33□□□□□ -0.28
TRIM39-206ENST00000420746 PIK3C2AO00443 1686 aa13.32□□□□□ -0.28
TRIM39-206ENST00000420746 HMGB2P26583 209 aaKnown RBP13.32□□□□□ -0.28
TRIM39-206ENST00000420746 IGSF1Q8N6C5 1336 aa13.32□□□□□ -0.28
TRIM39-206ENST00000420746 LY75O60449 1722 aa13.3□□□□□ -0.28
TRIM39-206ENST00000420746 NFAT5O94916 1531 aa13.29□□□□□ -0.28
TRIM39-206ENST00000420746 MSH5O43196 834 aa13.29□□□□□ -0.28
TRIM39-206ENST00000420746 MSL1Q68DK7 614 aa13.29□□□□□ -0.28
TRIM39-206ENST00000420746 FLAD1Q8NFF5 587 aa13.29□□□□□ -0.28
TRIM39-206ENST00000420746 ERBB3P21860 1342 aa13.29□□□□□ -0.28
TRIM39-206ENST00000420746 ANKRD36BQ8N2N9 1353 aa13.29□□□□□ -0.28
TRIM39-206ENST00000420746 RGPD5Q99666 1765 aa13.28□□□□□ -0.28
TRIM39-206ENST00000420746 HTRA3P83110 453 aa13.28□□□□□ -0.28
TRIM39-206ENST00000420746 C10orf71Q711Q0 1435 aa13.28□□□□□ -0.28
TRIM39-206ENST00000420746 QRICH2Q9H0J4 1663 aa13.28□□□□□ -0.28
TRIM39-206ENST00000420746 SRPK2P78362 688 aaKnown RBP13.27□□□□□ -0.29
TRIM39-206ENST00000420746 C16orf71Q8IYS4 520 aaPredicted RBP13.27□□□□□ -0.29
TRIM39-206ENST00000420746 NMRK2Q9NPI5 230 aa13.27□□□□□ -0.29
TRIM39-206ENST00000420746 CCNL1Q9UK58 526 aaPredicted RBP13.27□□□□□ -0.29
TRIM39-206ENST00000420746 NSD2O96028 1365 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms