RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 ANKLE1Q8NAG6 615 aa9.58□□□□□ -0.88
NIFKP3-201ENST00000417799 ADAM32Q8TC27 787 aa9.58□□□□□ -0.88
NIFKP3-201ENST00000417799 ZNF592Q92610 1267 aa9.58□□□□□ -0.88
NIFKP3-201ENST00000417799 ZBTB24O43167 697 aaPredicted RBP9.57□□□□□ -0.88
NIFKP3-201ENST00000417799 RFX1P22670 979 aa9.57□□□□□ -0.88
NIFKP3-201ENST00000417799 MCCD1P59942 119 aaPredicted RBP9.57□□□□□ -0.88
NIFKP3-201ENST00000417799 AGERQ15109 404 aa9.57□□□□□ -0.88
NIFKP3-201ENST00000417799 CFAP70Q5T0N1 1121 aa9.57□□□□□ -0.88
NIFKP3-201ENST00000417799 ZNF511Q8NB15 262 aa9.57□□□□□ -0.88
NIFKP3-201ENST00000417799 TFIP11Q9UBB9 837 aaKnown RBP9.57□□□□□ -0.88
NIFKP3-201ENST00000417799 PCDHB9Q9Y5E1 797 aa9.57□□□□□ -0.88
NIFKP3-201ENST00000417799 RAD54L2Q9Y4B4 1467 aa9.56□□□□□ -0.88
NIFKP3-201ENST00000417799 MAGEB6P1A0A0J9YX57 407 aa9.56□□□□□ -0.88
NIFKP3-201ENST00000417799 PPP1R18Q6NYC8 613 aa9.56□□□□□ -0.88
NIFKP3-201ENST00000417799 SH3RF1Q7Z6J0 888 aa9.56□□□□□ -0.88
NIFKP3-201ENST00000417799 BPHLQ86WA6 291 aaPredicted RBP9.56□□□□□ -0.88
NIFKP3-201ENST00000417799 CARD14Q9BXL6 1004 aa9.56□□□□□ -0.88
NIFKP3-201ENST00000417799 IRX2Q9BZI1 471 aaPredicted RBP9.56□□□□□ -0.88
NIFKP3-201ENST00000417799 CUX2O14529 1486 aa9.55□□□□□ -0.88
NIFKP3-201ENST00000417799 PPP1R15AO75807 674 aaPredicted RBP9.55□□□□□ -0.88
NIFKP3-201ENST00000417799 FOXJ1Q92949 421 aa9.55□□□□□ -0.88
NIFKP3-201ENST00000417799 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.55□□□□□ -0.88
NIFKP3-201ENST00000417799 LMOD1P29536 600 aaPredicted RBP9.54□□□□□ -0.88
NIFKP3-201ENST00000417799 PLA2G2CQ5R387 149 aa9.54□□□□□ -0.88
NIFKP3-201ENST00000417799 TBC1D9Q6ZT07 1266 aa9.54□□□□□ -0.88
NIFKP3-201ENST00000417799 DZIP3Q86Y13 1208 aaKnown RBP9.54□□□□□ -0.88
NIFKP3-201ENST00000417799 CEP126Q9P2H0 1117 aa9.54□□□□□ -0.88
NIFKP3-201ENST00000417799 IFT140Q96RY7 1462 aa9.53□□□□□ -0.88
NIFKP3-201ENST00000417799 ABCA10Q8WWZ4 1543 aa9.53□□□□□ -0.88
NIFKP3-201ENST00000417799 ATP9BO43861 1147 aa9.53□□□□□ -0.88
NIFKP3-201ENST00000417799 SH3BP2P78314 561 aa9.53□□□□□ -0.88
NIFKP3-201ENST00000417799 PBXIP1Q96AQ6 731 aa9.53□□□□□ -0.88
NIFKP3-201ENST00000417799 ACIN1Q9UKV3 1341 aaKnown RBP9.53□□□□□ -0.88
NIFKP3-201ENST00000417799 PIK3CDO00329 1044 aa9.52□□□□□ -0.89
NIFKP3-201ENST00000417799 TRIM32Q13049 653 aa9.52□□□□□ -0.89
NIFKP3-201ENST00000417799 SLFNL1Q499Z3 407 aa9.52□□□□□ -0.89
NIFKP3-201ENST00000417799 C4orf48Q5BLP8 95 aa9.52□□□□□ -0.89
NIFKP3-201ENST00000417799 MAFBQ9Y5Q3 323 aaPredicted RBP9.52□□□□□ -0.89
NIFKP3-201ENST00000417799 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.51□□□□□ -0.89
NIFKP3-201ENST00000417799 ERFEQ4G0M1 354 aa9.51□□□□□ -0.89
NIFKP3-201ENST00000417799 NFATC2IPQ8NCF5 419 aa9.51□□□□□ -0.89
NIFKP3-201ENST00000417799 TARBP1Q13395 1621 aaKnown RBP9.51□□□□□ -0.89
NIFKP3-201ENST00000417799 TDRD9Q8NDG6 1382 aaKnown RBP9.5□□□□□ -0.89
NIFKP3-201ENST00000417799 KIF27Q86VH2 1401 aa9.5□□□□□ -0.89
NIFKP3-201ENST00000417799 A0A0G2JS52 829 aa9.5□□□□□ -0.89
NIFKP3-201ENST00000417799 SKIP12755 728 aa9.5□□□□□ -0.89
NIFKP3-201ENST00000417799 RPIAP49247 311 aa9.5□□□□□ -0.89
NIFKP3-201ENST00000417799 FAM9AQ8IZU1 332 aaPredicted RBP9.5□□□□□ -0.89
NIFKP3-201ENST00000417799 RUSC2Q8N2Y8 1516 aa9.5□□□□□ -0.89
NIFKP3-201ENST00000417799 EEA1Q15075 1411 aa9.49□□□□□ -0.89
NIFKP3-201ENST00000417799 SRPK2P78362 688 aaKnown RBP9.49□□□□□ -0.89
NIFKP3-201ENST00000417799 RNF135Q8IUD6 432 aa9.49□□□□□ -0.89
NIFKP3-201ENST00000417799 FAM174AQ8TBP5 190 aa9.49□□□□□ -0.89
NIFKP3-201ENST00000417799 WNT7BP56706 349 aa9.48□□□□□ -0.89
NIFKP3-201ENST00000417799 PHTF2Q8N3S3 785 aa9.48□□□□□ -0.89
NIFKP3-201ENST00000417799 SLC10A4Q96EP9 437 aa9.48□□□□□ -0.89
NIFKP3-201ENST00000417799 C1QTNF2Q9BXJ5 285 aa9.48□□□□□ -0.89
NIFKP3-201ENST00000417799 CD2BP2O95400 341 aaKnown RBP9.47□□□□□ -0.89
NIFKP3-201ENST00000417799 PDIA4P13667 645 aaKnown RBP9.47□□□□□ -0.89
NIFKP3-201ENST00000417799 SKOR1P84550 965 aa9.47□□□□□ -0.89
NIFKP3-201ENST00000417799 AQRO60306 1485 aaKnown RBP eCLIP9.47□□□□□ -0.89
NIFKP3-201ENST00000417799 ZNF608Q9ULD9 1512 aaPredicted RBP9.46□□□□□ -0.89
NIFKP3-201ENST00000417799 WDR97A6NE52 1622 aa9.46□□□□□ -0.89
NIFKP3-201ENST00000417799 USP17L5A8MUK1 530 aa9.46□□□□□ -0.9
NIFKP3-201ENST00000417799 VARSP26640 1264 aaKnown RBP9.46□□□□□ -0.9
NIFKP3-201ENST00000417799 CDCA8Q53HL2 280 aa9.46□□□□□ -0.9
NIFKP3-201ENST00000417799 TRMT44Q8IYL2 757 aaKnown RBP9.46□□□□□ -0.9
NIFKP3-201ENST00000417799 RETREG2Q8NC44 543 aa9.46□□□□□ -0.9
NIFKP3-201ENST00000417799 IGF1RP08069 1367 aa9.46□□□□□ -0.9
NIFKP3-201ENST00000417799 GAPVD1Q14C86 1478 aa9.46□□□□□ -0.9
NIFKP3-201ENST00000417799 USP17L3A6NCW0 530 aa9.45□□□□□ -0.9
NIFKP3-201ENST00000417799 USP17L4A6NCW7 530 aa9.45□□□□□ -0.9
NIFKP3-201ENST00000417799 GIGYF1O75420 1035 aaPredicted RBP9.45□□□□□ -0.9
NIFKP3-201ENST00000417799 USP17L2Q6R6M4 530 aa9.45□□□□□ -0.9
NIFKP3-201ENST00000417799 USP17L1Q7RTZ2 530 aa9.45□□□□□ -0.9
NIFKP3-201ENST00000417799 PLEKHM2Q8IWE5 1019 aa9.45□□□□□ -0.9
NIFKP3-201ENST00000417799 PLPP7Q8NBV4 271 aa9.45□□□□□ -0.9
NIFKP3-201ENST00000417799 VRTNQ9H8Y1 702 aa9.45□□□□□ -0.9
NIFKP3-201ENST00000417799 CDV3Q9UKY7 258 aaKnown RBP9.45□□□□□ -0.9
NIFKP3-201ENST00000417799 NBPF20Q3BBV1 942 aa9.44□□□□□ -0.9
NIFKP3-201ENST00000417799 MAP7D1Q3KQU3 841 aa9.44□□□□□ -0.9
NIFKP3-201ENST00000417799 LIAT1Q6ZQX7 453 aa9.44□□□□□ -0.9
NIFKP3-201ENST00000417799 DEPDC4Q8N2C3 294 aa9.44□□□□□ -0.9
NIFKP3-201ENST00000417799 CHIC2Q9UKJ5 165 aa9.44□□□□□ -0.9
NIFKP3-201ENST00000417799 ABCA5Q8WWZ7 1642 aa9.44□□□□□ -0.9
NIFKP3-201ENST00000417799 LZTS3O60299 673 aaPredicted RBP9.43□□□□□ -0.9
NIFKP3-201ENST00000417799 KANK4Q5T7N3 995 aaPredicted RBP9.43□□□□□ -0.9
NIFKP3-201ENST00000417799 RNF20Q5VTR2 975 aa9.43□□□□□ -0.9
NIFKP3-201ENST00000417799 EHBP1Q8NDI1 1231 aa9.43□□□□□ -0.9
NIFKP3-201ENST00000417799 GRIN2BQ13224 1484 aa9.42□□□□□ -0.9
NIFKP3-201ENST00000417799 NCOA4Q13772 614 aa9.42□□□□□ -0.9
NIFKP3-201ENST00000417799 TSGA10IPQ3SY00 556 aa9.42□□□□□ -0.9
NIFKP3-201ENST00000417799 RC3H1Q5TC82 1133 aaKnown RBP9.42□□□□□ -0.9
NIFKP3-201ENST00000417799 EMID1Q96A84 441 aaPredicted RBP9.42□□□□□ -0.9
NIFKP3-201ENST00000417799 ERICH3Q5RHP9 1530 aa9.41□□□□□ -0.9
NIFKP3-201ENST00000417799 ESPNB1AK53 854 aa9.41□□□□□ -0.9
NIFKP3-201ENST00000417799 ATG7O95352 703 aa9.41□□□□□ -0.9
NIFKP3-201ENST00000417799 CSB-PGBD3P0DP91 1061 aa9.41□□□□□ -0.9
NIFKP3-201ENST00000417799 SLC19A1P41440 591 aa9.41□□□□□ -0.9
NIFKP3-201ENST00000417799 EML3Q32P44 896 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms