RNA–Protein interactions for RNA: ENST00000417652.5

NCL-203, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-203ENST00000417652 ATRNO75882 1429 aa9.41□□□□□ -0.9
NCL-203ENST00000417652 AATKQ6ZMQ8 1374 aa9.41□□□□□ -0.9
NCL-203ENST00000417652 SOCS7O14512 581 aa9.41□□□□□ -0.9
NCL-203ENST00000417652 FAM98CQ17RN3 349 aaKnown RBP9.41□□□□□ -0.9
NCL-203ENST00000417652 LARP1Q6PKG0 1096 aaKnown RBP9.41□□□□□ -0.9
NCL-203ENST00000417652 LTV1Q96GA3 475 aaPredicted RBP9.41□□□□□ -0.9
NCL-203ENST00000417652 NWD2Q9ULI1 1742 aa9.4□□□□□ -0.9
NCL-203ENST00000417652 PLCH1Q4KWH8 1693 aa9.4□□□□□ -0.9
NCL-203ENST00000417652 MORC1Q86VD1 984 aa9.4□□□□□ -0.9
NCL-203ENST00000417652 SEPT12Q8IYM1 358 aa9.4□□□□□ -0.9
NCL-203ENST00000417652 NLRP2Q9NX02 1062 aa9.4□□□□□ -0.9
NCL-203ENST00000417652 SPATA31A5Q5VU36 1347 aa9.39□□□□□ -0.91
NCL-203ENST00000417652 SPATA31A7Q8IWB4 1347 aa9.39□□□□□ -0.91
NCL-203ENST00000417652 NRKQ7Z2Y5 1582 aa9.39□□□□□ -0.91
NCL-203ENST00000417652 FBLN1P23142 703 aa9.39□□□□□ -0.91
NCL-203ENST00000417652 RRS1Q15050 365 aaKnown RBP9.39□□□□□ -0.91
NCL-203ENST00000417652 TCP11L2Q8N4U5 519 aa9.39□□□□□ -0.91
NCL-203ENST00000417652 AXIN2Q9Y2T1 843 aa9.39□□□□□ -0.91
NCL-203ENST00000417652 SLIT3O75094 1523 aa9.39□□□□□ -0.91
NCL-203ENST00000417652 CCDC7Q96M83 1385 aa9.38□□□□□ -0.91
NCL-203ENST00000417652 SPATA31A1Q5TZJ5 1347 aa9.38□□□□□ -0.91
NCL-203ENST00000417652 WASHC2AQ641Q2 1341 aa9.38□□□□□ -0.91
NCL-203ENST00000417652 PDE3BQ13370 1112 aa9.38□□□□□ -0.91
NCL-203ENST00000417652 ANKRD24Q8TF21 1146 aa9.38□□□□□ -0.91
NCL-203ENST00000417652 IP6K1Q92551 441 aa9.38□□□□□ -0.91
NCL-203ENST00000417652 CRYBG1Q9Y4K1 1723 aa9.38□□□□□ -0.91
NCL-203ENST00000417652 MAP3K19Q56UN5 1328 aa9.37□□□□□ -0.91
NCL-203ENST00000417652 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.37□□□□□ -0.91
NCL-203ENST00000417652 MYOM1P52179 1685 aa9.37□□□□□ -0.91
NCL-203ENST00000417652 CAMTA1Q9Y6Y1 1673 aa9.37□□□□□ -0.91
NCL-203ENST00000417652 CC2D1BQ5T0F9 858 aaKnown RBP9.37□□□□□ -0.91
NCL-203ENST00000417652 KRT27Q7Z3Y8 459 aa9.37□□□□□ -0.91
NCL-203ENST00000417652 THRAP3Q9Y2W1 955 aaKnown RBP9.37□□□□□ -0.91
NCL-203ENST00000417652 OVOS2A0A0J9YW53 1432 aa9.37□□□□□ -0.91
NCL-203ENST00000417652 OVOS2Q6IE36 1432 aa9.37□□□□□ -0.91
NCL-203ENST00000417652 WDR17Q8IZU2 1322 aa9.36□□□□□ -0.91
NCL-203ENST00000417652 KIF20BQ96Q89 1820 aa9.36□□□□□ -0.91
NCL-203ENST00000417652 CDK12Q9NYV4 1490 aaPredicted RBP9.36□□□□□ -0.91
NCL-203ENST00000417652 HOXC9P31274 260 aa9.36□□□□□ -0.91
NCL-203ENST00000417652 CARD10Q9BWT7 1032 aa9.36□□□□□ -0.91
NCL-203ENST00000417652 RGS12O14924 1447 aa9.36□□□□□ -0.91
NCL-203ENST00000417652 CRB1P82279 1406 aa9.36□□□□□ -0.91
NCL-203ENST00000417652 ONECUT3O60422 494 aaPredicted RBP9.35□□□□□ -0.91
NCL-203ENST00000417652 SF3B2Q13435 895 aaKnown RBP9.35□□□□□ -0.91
NCL-203ENST00000417652 BARGINQ6ZT62 677 aa9.35□□□□□ -0.91
NCL-203ENST00000417652 CDCA7Q9BWT1 371 aaPredicted RBP9.35□□□□□ -0.91
NCL-203ENST00000417652 NFAT5O94916 1531 aa9.35□□□□□ -0.91
NCL-203ENST00000417652 NSD2O96028 1365 aa9.35□□□□□ -0.91
NCL-203ENST00000417652 LTN1O94822 1766 aa9.35□□□□□ -0.91
NCL-203ENST00000417652 RGPD5Q99666 1765 aa9.35□□□□□ -0.91
NCL-203ENST00000417652 COL5A2P05997 1499 aaPredicted RBP9.34□□□□□ -0.91
NCL-203ENST00000417652 SMG6Q86US8 1419 aaKnown RBP9.34□□□□□ -0.91
NCL-203ENST00000417652 EXOC5O00471 708 aa9.34□□□□□ -0.91
NCL-203ENST00000417652 DDB1Q16531 1140 aa9.34□□□□□ -0.91
NCL-203ENST00000417652 HSP90AB2PQ58FF8 381 aa9.34□□□□□ -0.91
NCL-203ENST00000417652 EMILIN1Q9Y6C2 1016 aa9.34□□□□□ -0.91
NCL-203ENST00000417652 NRAPQ86VF7 1730 aa9.34□□□□□ -0.92
NCL-203ENST00000417652 ERBB3P21860 1342 aa9.33□□□□□ -0.92
NCL-203ENST00000417652 GLI3P10071 1580 aa9.33□□□□□ -0.92
NCL-203ENST00000417652 BLMP54132 1417 aaPredicted RBP9.33□□□□□ -0.92
NCL-203ENST00000417652 IL2RBP14784 551 aa9.32□□□□□ -0.92
NCL-203ENST00000417652 DDX10Q13206 875 aaKnown RBP9.32□□□□□ -0.92
NCL-203ENST00000417652 AMER1Q5JTC6 1135 aaPredicted RBP9.32□□□□□ -0.92
NCL-203ENST00000417652 FAM182BQ5T319 152 aa9.32□□□□□ -0.92
NCL-203ENST00000417652 RAPGEF4Q8WZA2 1011 aa9.32□□□□□ -0.92
NCL-203ENST00000417652 POLKQ9UBT6 870 aa9.32□□□□□ -0.92
NCL-203ENST00000417652 MAP2P11137 1827 aaKnown RBP9.32□□□□□ -0.92
NCL-203ENST00000417652 RTL1A6NKG5 1358 aa9.32□□□□□ -0.92
NCL-203ENST00000417652 FLT4P35916 1363 aa9.32□□□□□ -0.92
NCL-203ENST00000417652 USP54Q70EL1 1684 aa9.32□□□□□ -0.92
NCL-203ENST00000417652 LMO7Q8WWI1 1683 aa9.32□□□□□ -0.92
NCL-203ENST00000417652 COL18A1P39060 1754 aa9.32□□□□□ -0.92
NCL-203ENST00000417652 KAT6BQ8WYB5 2073 aa9.32□□□□□ -0.92
NCL-203ENST00000417652 PER1O15534 1290 aaPredicted RBP9.31□□□□□ -0.92
NCL-203ENST00000417652 FAM196AQ6ZSG2 479 aa9.31□□□□□ -0.92
NCL-203ENST00000417652 CCDC125Q86Z20 511 aa9.31□□□□□ -0.92
NCL-203ENST00000417652 UPF1Q92900 1129 aaKnown RBP eCLIP9.31□□□□□ -0.92
NCL-203ENST00000417652 INSRP06213 1382 aa9.3□□□□□ -0.92
NCL-203ENST00000417652 KIF24Q5T7B8 1368 aa9.3□□□□□ -0.92
NCL-203ENST00000417652 TATP17735 454 aaPredicted RBP9.3□□□□□ -0.92
NCL-203ENST00000417652 USHBP1Q8N6Y0 703 aa9.3□□□□□ -0.92
NCL-203ENST00000417652 ABCC6O95255 1503 aa9.3□□□□□ -0.92
NCL-203ENST00000417652 BRWD3Q6RI45 1802 aa9.29□□□□□ -0.92
NCL-203ENST00000417652 MTHFSP49914 203 aa9.29□□□□□ -0.92
NCL-203ENST00000417652 NBPF6Q5VWK0 638 aa9.29□□□□□ -0.92
NCL-203ENST00000417652 DDX54Q8TDD1 881 aaKnown RBP9.29□□□□□ -0.92
NCL-203ENST00000417652 NBPF4Q96M43 638 aa9.29□□□□□ -0.92
NCL-203ENST00000417652 CFAP53Q96M91 514 aa9.29□□□□□ -0.92
NCL-203ENST00000417652 ZNF316A6NFI3 1004 aaPredicted RBP9.28□□□□□ -0.92
NCL-203ENST00000417652 TRIM37O94972 964 aa9.28□□□□□ -0.92
NCL-203ENST00000417652 ZCRB1Q8TBF4 217 aaKnown RBP9.28□□□□□ -0.92
NCL-203ENST00000417652 ANKRD26Q9UPS8 1709 aa9.28□□□□□ -0.92
NCL-203ENST00000417652 BAG6P46379 1132 aa9.27□□□□□ -0.93
NCL-203ENST00000417652 EIF4A2Q14240 407 aaKnown RBP9.27□□□□□ -0.93
NCL-203ENST00000417652 NPC1L1Q9UHC9 1359 aa9.26□□□□□ -0.93
NCL-203ENST00000417652 DIAPH1O60610 1272 aaKnown RBP9.26□□□□□ -0.93
NCL-203ENST00000417652 APBA3O96018 575 aa9.26□□□□□ -0.93
NCL-203ENST00000417652 EYA1Q99502 592 aa9.26□□□□□ -0.93
NCL-203ENST00000417652 SPG7Q9UQ90 795 aa9.26□□□□□ -0.93
NCL-203ENST00000417652 U2SURPO15042 1029 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms