RNA–Protein interactions for RNA: ENST00000417572.5

SEC22C-205, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22C, Length 1,513 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-205ENST00000417572 KIF24Q5T7B8 1368 aa17.48■□□□□ 0.39
SEC22C-205ENST00000417572 PEAK1Q9H792 1746 aa17.48■□□□□ 0.39
SEC22C-205ENST00000417572 CFAP53Q96M91 514 aa17.47■□□□□ 0.39
SEC22C-205ENST00000417572 RTL1A6NKG5 1358 aa17.47■□□□□ 0.39
SEC22C-205ENST00000417572 INSRP06213 1382 aa17.46■□□□□ 0.39
SEC22C-205ENST00000417572 LTN1O94822 1766 aa17.46■□□□□ 0.39
SEC22C-205ENST00000417572 CCER2I3L3R5 266 aa17.46■□□□□ 0.39
SEC22C-205ENST00000417572 MEX3CQ5U5Q3 659 aaKnown RBP17.46■□□□□ 0.39
SEC22C-205ENST00000417572 LTV1Q96GA3 475 aaPredicted RBP17.46■□□□□ 0.39
SEC22C-205ENST00000417572 C8orf37Q96NL8 207 aa17.46■□□□□ 0.39
SEC22C-205ENST00000417572 CDK12Q9NYV4 1490 aaPredicted RBP17.45■□□□□ 0.38
SEC22C-205ENST00000417572 NGLY1Q96IV0 654 aa17.45■□□□□ 0.38
SEC22C-205ENST00000417572 MRS2Q9HD23 443 aa17.45■□□□□ 0.38
SEC22C-205ENST00000417572 BTG4Q9NY30 223 aa17.45■□□□□ 0.38
SEC22C-205ENST00000417572 DIAPH1O60610 1272 aaKnown RBP17.44■□□□□ 0.38
SEC22C-205ENST00000417572 EIF4A2Q14240 407 aaKnown RBP17.44■□□□□ 0.38
SEC22C-205ENST00000417572 COL18A1P39060 1754 aa17.44■□□□□ 0.38
SEC22C-205ENST00000417572 IL13P35225 146 aa17.43■□□□□ 0.38
SEC22C-205ENST00000417572 ANKRD24Q8TF21 1146 aa17.43■□□□□ 0.38
SEC22C-205ENST00000417572 CAMTA1Q9Y6Y1 1673 aa17.43■□□□□ 0.38
SEC22C-205ENST00000417572 BLMP54132 1417 aaPredicted RBP17.43■□□□□ 0.38
SEC22C-205ENST00000417572 EVA1CP58658 441 aa17.42■□□□□ 0.38
SEC22C-205ENST00000417572 COL3A1P02461 1466 aaPredicted RBP17.42■□□□□ 0.38
SEC22C-205ENST00000417572 STRN4Q9NRL3 753 aa17.42■□□□□ 0.38
SEC22C-205ENST00000417572 LMO7Q8WWI1 1683 aa17.41■□□□□ 0.38
SEC22C-205ENST00000417572 COL14A1Q05707 1796 aaKnown RBP17.41■□□□□ 0.38
SEC22C-205ENST00000417572 FNBP4Q8N3X1 1017 aaPredicted RBP17.41■□□□□ 0.38
SEC22C-205ENST00000417572 ABCC6O95255 1503 aa17.41■□□□□ 0.38
SEC22C-205ENST00000417572 ERBB3P21860 1342 aa17.4■□□□□ 0.38
SEC22C-205ENST00000417572 CSB-PGBD3P0DP91 1061 aa17.4■□□□□ 0.38
SEC22C-205ENST00000417572 SLIT2O94813 1529 aa17.39■□□□□ 0.37
SEC22C-205ENST00000417572 U2SURPO15042 1029 aaKnown RBP17.39■□□□□ 0.37
SEC22C-205ENST00000417572 NUDCQ9Y266 331 aa17.39■□□□□ 0.37
SEC22C-205ENST00000417572 COL5A2P05997 1499 aaPredicted RBP17.39■□□□□ 0.37
SEC22C-205ENST00000417572 LARP1Q6PKG0 1096 aaKnown RBP17.38■□□□□ 0.37
SEC22C-205ENST00000417572 PNISRQ8TF01 805 aaKnown RBP17.38■□□□□ 0.37
SEC22C-205ENST00000417572 EYA1Q99502 592 aa17.38■□□□□ 0.37
SEC22C-205ENST00000417572 RGPD5Q99666 1765 aa17.38■□□□□ 0.37
SEC22C-205ENST00000417572 NBPF6Q5VWK0 638 aa17.37■□□□□ 0.37
SEC22C-205ENST00000417572 UNC5CLQ8IV45 518 aa17.37■□□□□ 0.37
SEC22C-205ENST00000417572 NBPF4Q96M43 638 aa17.37■□□□□ 0.37
SEC22C-205ENST00000417572 AFF2P51816 1311 aa17.37■□□□□ 0.37
SEC22C-205ENST00000417572 WDR17Q8IZU2 1322 aa17.37■□□□□ 0.37
SEC22C-205ENST00000417572 NLRP2Q9NX02 1062 aa17.37■□□□□ 0.37
SEC22C-205ENST00000417572 USP21Q9UK80 565 aa17.37■□□□□ 0.37
SEC22C-205ENST00000417572 BCL9LQ86UU0 1499 aa17.36■□□□□ 0.37
SEC22C-205ENST00000417572 U2AF1L5P0DN76 240 aaPredicted RBP17.36■□□□□ 0.37
SEC22C-205ENST00000417572 U2AF1Q01081 240 aaKnown RBP eCLIP17.36■□□□□ 0.37
SEC22C-205ENST00000417572 WDR43Q15061 677 aaKnown RBP eCLIP17.36■□□□□ 0.37
SEC22C-205ENST00000417572 TOM1L2Q6ZVM7 507 aa17.36■□□□□ 0.37
SEC22C-205ENST00000417572 PLCH1Q4KWH8 1693 aa17.35■□□□□ 0.37
SEC22C-205ENST00000417572 USHBP1Q8N6Y0 703 aa17.35■□□□□ 0.37
SEC22C-205ENST00000417572 FAM9BQ8IZU0 186 aa17.34■□□□□ 0.37
SEC22C-205ENST00000417572 ADAMTS8Q9UP79 889 aa17.34■□□□□ 0.37
SEC22C-205ENST00000417572 IGSF1Q8N6C5 1336 aa17.34■□□□□ 0.37
SEC22C-205ENST00000417572 HMOX1P09601 288 aa17.33■□□□□ 0.37
SEC22C-205ENST00000417572 SULT6B1Q6IMI4 303 aa17.33■□□□□ 0.37
SEC22C-205ENST00000417572 CARD10Q9BWT7 1032 aa17.33■□□□□ 0.37
SEC22C-205ENST00000417572 AEBP1Q8IUX7 1158 aa17.32■□□□□ 0.36
SEC22C-205ENST00000417572 NWD2Q9ULI1 1742 aa17.32■□□□□ 0.36
SEC22C-205ENST00000417572 CRB1P82279 1406 aa17.32■□□□□ 0.36
SEC22C-205ENST00000417572 VPS72Q15906 364 aa17.31■□□□□ 0.36
SEC22C-205ENST00000417572 USP35Q9P2H5 1018 aa17.31■□□□□ 0.36
SEC22C-205ENST00000417572 NRAPQ86VF7 1730 aa17.31■□□□□ 0.36
SEC22C-205ENST00000417572 CCDC9Q9Y3X0 531 aaKnown RBP17.31■□□□□ 0.36
SEC22C-205ENST00000417572 FCHSD2O94868 740 aa17.3■□□□□ 0.36
SEC22C-205ENST00000417572 QTRT2Q9H974 415 aaKnown RBP17.3■□□□□ 0.36
SEC22C-205ENST00000417572 SPATA31A5Q5VU36 1347 aa17.3■□□□□ 0.36
SEC22C-205ENST00000417572 SPATA31A7Q8IWB4 1347 aa17.3■□□□□ 0.36
SEC22C-205ENST00000417572 RGPD1P0DJD0 1748 aa17.29■□□□□ 0.36
SEC22C-205ENST00000417572 RSPH6AQ9H0K4 717 aa17.29■□□□□ 0.36
SEC22C-205ENST00000417572 TRPC5Q9UL62 973 aaPredicted RBP17.29■□□□□ 0.36
SEC22C-205ENST00000417572 SPATA31A1Q5TZJ5 1347 aa17.29■□□□□ 0.36
SEC22C-205ENST00000417572 RGPD2P0DJD1 1756 aa17.28■□□□□ 0.36
SEC22C-205ENST00000417572 KDRP35968 1356 aa17.28■□□□□ 0.36
SEC22C-205ENST00000417572 NCAPD2Q15021 1401 aa17.28■□□□□ 0.36
SEC22C-205ENST00000417572 PRKAR2BP31323 418 aa17.27■□□□□ 0.36
SEC22C-205ENST00000417572 ZNF772Q68DY9 489 aaPredicted RBP17.27■□□□□ 0.36
SEC22C-205ENST00000417572 TCP11L2Q8N4U5 519 aa17.27■□□□□ 0.36
SEC22C-205ENST00000417572 CCDC146Q8IYE0 955 aa17.26■□□□□ 0.35
SEC22C-205ENST00000417572 GJD4Q96KN9 370 aaPredicted RBP17.26■□□□□ 0.35
SEC22C-205ENST00000417572 PLEKHF1Q96S99 279 aa17.26■□□□□ 0.35
SEC22C-205ENST00000417572 RGS17Q9UGC6 210 aaPredicted RBP17.26■□□□□ 0.35
SEC22C-205ENST00000417572 FAM208AQ9UK61 1670 aaKnown RBP17.26■□□□□ 0.35
SEC22C-205ENST00000417572 ATRNO75882 1429 aa17.26■□□□□ 0.35
SEC22C-205ENST00000417572 PNNQ9H307 717 aaKnown RBP17.26■□□□□ 0.35
SEC22C-205ENST00000417572 THRAP3Q9Y2W1 955 aaKnown RBP17.26■□□□□ 0.35
SEC22C-205ENST00000417572 RAPGEF4Q8WZA2 1011 aa17.25■□□□□ 0.35
SEC22C-205ENST00000417572 PHACTR3Q96KR7 559 aa17.25■□□□□ 0.35
SEC22C-205ENST00000417572 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.25■□□□□ 0.35
SEC22C-205ENST00000417572 IL2RBP14784 551 aa17.24■□□□□ 0.35
SEC22C-205ENST00000417572 TATP17735 454 aaPredicted RBP17.24■□□□□ 0.35
SEC22C-205ENST00000417572 RUNDC1Q96C34 613 aa17.24■□□□□ 0.35
SEC22C-205ENST00000417572 PHF23Q9BUL5 403 aaPredicted RBP17.24■□□□□ 0.35
SEC22C-205ENST00000417572 BARGINQ6ZT62 677 aa17.23■□□□□ 0.35
SEC22C-205ENST00000417572 FAM98CQ17RN3 349 aaKnown RBP17.22■□□□□ 0.35
SEC22C-205ENST00000417572 MEGF6O75095 1541 aa17.22■□□□□ 0.35
SEC22C-205ENST00000417572 NEFMP07197 916 aa17.21■□□□□ 0.34
SEC22C-205ENST00000417572 MAPK8IP3Q9UPT6 1336 aa17.2■□□□□ 0.34
SEC22C-205ENST00000417572 SENP3-EIF4A1A0A087X0R7 540 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms