RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 TOM1L2Q6ZVM7 507 aa20.11■□□□□ 0.81
SSB-204ENST00000417292 SLIT3O75094 1523 aa20.11■□□□□ 0.81
SSB-204ENST00000417292 COL18A1P39060 1754 aa20.11■□□□□ 0.81
SSB-204ENST00000417292 BCL9O00512 1426 aa20.1■□□□□ 0.81
SSB-204ENST00000417292 SYT17Q9BSW7 474 aa20.1■□□□□ 0.81
SSB-204ENST00000417292 FHDC1Q9C0D6 1143 aaPredicted RBP20.1■□□□□ 0.81
SSB-204ENST00000417292 AXIN2Q9Y2T1 843 aa20.1■□□□□ 0.81
SSB-204ENST00000417292 WNK3Q9BYP7 1800 aa20.09■□□□□ 0.81
SSB-204ENST00000417292 NLRP6P59044 892 aa20.09■□□□□ 0.81
SSB-204ENST00000417292 SRPK2P78362 688 aaKnown RBP20.09■□□□□ 0.81
SSB-204ENST00000417292 CABP2Q9NPB3 220 aa20.09■□□□□ 0.81
SSB-204ENST00000417292 TXNRD1Q16881 649 aa20.08■□□□□ 0.81
SSB-204ENST00000417292 BRD4O60885 1362 aaPredicted RBP20.08■□□□□ 0.8
SSB-204ENST00000417292 WDR17Q8IZU2 1322 aa20.07■□□□□ 0.8
SSB-204ENST00000417292 SLC15A2Q16348 729 aa20.07■□□□□ 0.8
SSB-204ENST00000417292 NBPF1Q3BBV0 1214 aa20.07■□□□□ 0.8
SSB-204ENST00000417292 SGIP1Q9BQI5 828 aa20.07■□□□□ 0.8
SSB-204ENST00000417292 STK32BQ9NY57 414 aa20.07■□□□□ 0.8
SSB-204ENST00000417292 USP6P35125 1406 aa20.07■□□□□ 0.8
SSB-204ENST00000417292 AKAP12Q02952 1782 aa20.06■□□□□ 0.8
SSB-204ENST00000417292 CEP350Q5VT06 3117 aa20.06■□□□□ 0.8
SSB-204ENST00000417292 KIAA1210Q9ULL0 1709 aa20.05■□□□□ 0.8
SSB-204ENST00000417292 SENP3-EIF4A1A0A087X0R7 540 aa20.05■□□□□ 0.8
SSB-204ENST00000417292 CABP1Q9NZU7 370 aa20.05■□□□□ 0.8
SSB-204ENST00000417292 PIK3C2AO00443 1686 aa20.04■□□□□ 0.8
SSB-204ENST00000417292 CDCA7Q9BWT1 371 aaPredicted RBP20.04■□□□□ 0.8
SSB-204ENST00000417292 MTFR1LQ9H019 292 aa20.04■□□□□ 0.8
SSB-204ENST00000417292 C1QTNF8P60827 252 aa20.03■□□□□ 0.8
SSB-204ENST00000417292 CPSF1Q10570 1443 aaKnown RBP20.02■□□□□ 0.8
SSB-204ENST00000417292 CHD4Q14839 1912 aa20.02■□□□□ 0.8
SSB-204ENST00000417292 CENPJQ9HC77 1338 aaPredicted RBP20.02■□□□□ 0.79
SSB-204ENST00000417292 RGPD5Q99666 1765 aa20.01■□□□□ 0.79
SSB-204ENST00000417292 ARHGEF25Q86VW2 580 aa20.01■□□□□ 0.79
SSB-204ENST00000417292 CARD10Q9BWT7 1032 aa20.01■□□□□ 0.79
SSB-204ENST00000417292 EXOC5O00471 708 aa19.99■□□□□ 0.79
SSB-204ENST00000417292 ARXQ96QS3 562 aa19.98■□□□□ 0.79
SSB-204ENST00000417292 QRICH2Q9H0J4 1663 aa19.97■□□□□ 0.79
SSB-204ENST00000417292 SOX12O15370 315 aa19.97■□□□□ 0.79
SSB-204ENST00000417292 CSB-PGBD3P0DP91 1061 aa19.97■□□□□ 0.79
SSB-204ENST00000417292 PAPPAQ13219 1627 aa19.96■□□□□ 0.79
SSB-204ENST00000417292 NHSQ6T4R5 1651 aa19.96■□□□□ 0.79
SSB-204ENST00000417292 MAP3K5Q99683 1374 aa19.95■□□□□ 0.79
SSB-204ENST00000417292 TNS2Q63HR2 1409 aa19.95■□□□□ 0.78
SSB-204ENST00000417292 TRPM1Q7Z4N2 1603 aa19.94■□□□□ 0.78
SSB-204ENST00000417292 KCNH5Q8NCM2 988 aa19.94■□□□□ 0.78
SSB-204ENST00000417292 ACSBG1Q96GR2 724 aa19.94■□□□□ 0.78
SSB-204ENST00000417292 TTC21BQ7Z4L5 1316 aa19.94■□□□□ 0.78
SSB-204ENST00000417292 NFAT5O94916 1531 aa19.93■□□□□ 0.78
SSB-204ENST00000417292 CCDC7Q96M83 1385 aa19.93■□□□□ 0.78
SSB-204ENST00000417292 ZNF827Q17R98 1081 aa19.92■□□□□ 0.78
SSB-204ENST00000417292 GPR162Q16538 588 aa19.9■□□□□ 0.78
SSB-204ENST00000417292 LRRC4BQ9NT99 713 aa19.9■□□□□ 0.78
SSB-204ENST00000417292 ABCC6O95255 1503 aa19.9■□□□□ 0.78
SSB-204ENST00000417292 BTAF1O14981 1849 aa19.89■□□□□ 0.77
SSB-204ENST00000417292 IFFO2Q5TF58 517 aa19.89■□□□□ 0.77
SSB-204ENST00000417292 ZNF692Q9BU19 519 aaPredicted RBP19.88■□□□□ 0.77
SSB-204ENST00000417292 EVC2Q86UK5 1308 aa19.87■□□□□ 0.77
SSB-204ENST00000417292 TTC21AQ8NDW8 1320 aa19.87■□□□□ 0.77
SSB-204ENST00000417292 GIGYF1O75420 1035 aaPredicted RBP19.86■□□□□ 0.77
SSB-204ENST00000417292 ERBB3P21860 1342 aa19.85■□□□□ 0.77
SSB-204ENST00000417292 AKT1S1Q96B36 256 aa19.85■□□□□ 0.77
SSB-204ENST00000417292 KLHL34Q8N239 644 aa19.84■□□□□ 0.77
SSB-204ENST00000417292 NLRP2Q9NX02 1062 aa19.84■□□□□ 0.77
SSB-204ENST00000417292 COL24A1Q17RW2 1714 aa19.83■□□□□ 0.77
SSB-204ENST00000417292 SHANK3Q9BYB0 1731 aa19.83■□□□□ 0.77
SSB-204ENST00000417292 IL2RBP14784 551 aa19.83■□□□□ 0.77
SSB-204ENST00000417292 PELP1Q8IZL8 1130 aaKnown RBP19.82■□□□□ 0.76
SSB-204ENST00000417292 SLC16A10Q8TF71 515 aa19.82■□□□□ 0.76
SSB-204ENST00000417292 KTN1Q86UP2 1357 aaKnown RBP19.82■□□□□ 0.76
SSB-204ENST00000417292 PNPLA7Q6ZV29 1317 aa19.81■□□□□ 0.76
SSB-204ENST00000417292 NLGN2Q8NFZ4 835 aa19.81■□□□□ 0.76
SSB-204ENST00000417292 QSER1Q2KHR3 1735 aa19.81■□□□□ 0.76
SSB-204ENST00000417292 KAT6BQ8WYB5 2073 aa19.8■□□□□ 0.76
SSB-204ENST00000417292 POLD1P28340 1107 aa19.79■□□□□ 0.76
SSB-204ENST00000417292 USP31Q70CQ4 1352 aa19.79■□□□□ 0.76
SSB-204ENST00000417292 MON2Q7Z3U7 1717 aa19.79■□□□□ 0.76
SSB-204ENST00000417292 KCNQ4P56696 695 aa19.78■□□□□ 0.76
SSB-204ENST00000417292 SLC27A3Q5K4L6 730 aa19.78■□□□□ 0.76
SSB-204ENST00000417292 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.78■□□□□ 0.76
SSB-204ENST00000417292 ANKRD24Q8TF21 1146 aa19.78■□□□□ 0.76
SSB-204ENST00000417292 TUBGCP6Q96RT7 1819 aa19.78■□□□□ 0.76
SSB-204ENST00000417292 LTN1O94822 1766 aa19.78■□□□□ 0.76
SSB-204ENST00000417292 NME9Q86XW9 330 aa19.77■□□□□ 0.76
SSB-204ENST00000417292 USP54Q70EL1 1684 aa19.77■□□□□ 0.76
SSB-204ENST00000417292 YBX3P16989 372 aaKnown RBP eCLIP19.76■□□□□ 0.75
SSB-204ENST00000417292 L3MBTL2Q969R5 705 aa19.76■□□□□ 0.75
SSB-204ENST00000417292 TFCP2L1Q9NZI6 479 aa19.75■□□□□ 0.75
SSB-204ENST00000417292 DDX54Q8TDD1 881 aaKnown RBP19.74■□□□□ 0.75
SSB-204ENST00000417292 CD163L1Q9NR16 1453 aa19.73■□□□□ 0.75
SSB-204ENST00000417292 SBNO2Q9Y2G9 1366 aa19.73■□□□□ 0.75
SSB-204ENST00000417292 ROCK2O75116 1388 aaKnown RBP19.7■□□□□ 0.74
SSB-204ENST00000417292 NSD2O96028 1365 aa19.7■□□□□ 0.74
SSB-204ENST00000417292 GRIN3BO60391 1043 aa19.7■□□□□ 0.74
SSB-204ENST00000417292 PRIM1P49642 420 aaKnown RBP19.7■□□□□ 0.74
SSB-204ENST00000417292 SYTL4Q96C24 671 aaPredicted RBP19.7■□□□□ 0.74
SSB-204ENST00000417292 ANKRD36BQ8N2N9 1353 aa19.7■□□□□ 0.74
SSB-204ENST00000417292 LY75O60449 1722 aa19.69■□□□□ 0.74
SSB-204ENST00000417292 ATP10DQ9P241 1426 aa19.68■□□□□ 0.74
SSB-204ENST00000417292 DOT1LQ8TEK3 1739 aa19.68■□□□□ 0.74
SSB-204ENST00000417292 COL23A1Q86Y22 540 aaPredicted RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms