RNA–Protein interactions for RNA: ENST00000417271.1

SLC8A1-210, Transcript of solute carrier family 8 member A1, humanhuman

TSL 1 (best)

Gene SLC8A1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC8A1-210ENST00000417271 PER1O15534 1290 aaPredicted RBP7.64□□□□□ -1.19
SLC8A1-210ENST00000417271 AMER1Q5JTC6 1135 aaPredicted RBP7.64□□□□□ -1.19
SLC8A1-210ENST00000417271 CC2D1BQ5T0F9 858 aaKnown RBP7.64□□□□□ -1.19
SLC8A1-210ENST00000417271 LARP1Q6PKG0 1096 aaKnown RBP7.64□□□□□ -1.19
SLC8A1-210ENST00000417271 USP35Q9P2H5 1018 aa7.64□□□□□ -1.19
SLC8A1-210ENST00000417271 KNSTRNQ9Y448 316 aa7.64□□□□□ -1.19
SLC8A1-210ENST00000417271 EMILIN1Q9Y6C2 1016 aa7.64□□□□□ -1.19
SLC8A1-210ENST00000417271 COL18A1P39060 1754 aa7.64□□□□□ -1.19
SLC8A1-210ENST00000417271 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.64□□□□□ -1.19
SLC8A1-210ENST00000417271 NWD2Q9ULI1 1742 aa7.64□□□□□ -1.19
SLC8A1-210ENST00000417271 RGS12O14924 1447 aa7.63□□□□□ -1.19
SLC8A1-210ENST00000417271 KCNA4P22459 653 aa7.63□□□□□ -1.19
SLC8A1-210ENST00000417271 RXRBP28702 533 aa7.63□□□□□ -1.19
SLC8A1-210ENST00000417271 VPS72Q15906 364 aa7.63□□□□□ -1.19
SLC8A1-210ENST00000417271 LTV1Q96GA3 475 aaPredicted RBP7.63□□□□□ -1.19
SLC8A1-210ENST00000417271 GJD4Q96KN9 370 aaPredicted RBP7.63□□□□□ -1.19
SLC8A1-210ENST00000417271 PEAK1Q9H792 1746 aa7.63□□□□□ -1.19
SLC8A1-210ENST00000417271 LTN1O94822 1766 aa7.62□□□□□ -1.19
SLC8A1-210ENST00000417271 SPATA31A5Q5VU36 1347 aa7.62□□□□□ -1.19
SLC8A1-210ENST00000417271 SPATA31A7Q8IWB4 1347 aa7.62□□□□□ -1.19
SLC8A1-210ENST00000417271 PPM1GO15355 546 aaPredicted RBP7.62□□□□□ -1.19
SLC8A1-210ENST00000417271 AMPHP49418 695 aa7.62□□□□□ -1.19
SLC8A1-210ENST00000417271 EVA1CP58658 441 aa7.62□□□□□ -1.19
SLC8A1-210ENST00000417271 RBM6P78332 1123 aaKnown RBP7.62□□□□□ -1.19
SLC8A1-210ENST00000417271 DDX10Q13206 875 aaKnown RBP7.62□□□□□ -1.19
SLC8A1-210ENST00000417271 SPATA31A1Q5TZJ5 1347 aa7.61□□□□□ -1.19
SLC8A1-210ENST00000417271 A0A0G2JS52 829 aa7.61□□□□□ -1.19
SLC8A1-210ENST00000417271 CSB-PGBD3P0DP91 1061 aa7.61□□□□□ -1.19
SLC8A1-210ENST00000417271 HOXC9P31274 260 aa7.61□□□□□ -1.19
SLC8A1-210ENST00000417271 MYT1Q01538 1121 aa7.61□□□□□ -1.19
SLC8A1-210ENST00000417271 FAM98CQ17RN3 349 aaKnown RBP7.61□□□□□ -1.19
SLC8A1-210ENST00000417271 MORC1Q86VD1 984 aa7.61□□□□□ -1.19
SLC8A1-210ENST00000417271 ANKRD24Q8TF21 1146 aa7.61□□□□□ -1.19
SLC8A1-210ENST00000417271 IP6K1Q92551 441 aa7.61□□□□□ -1.19
SLC8A1-210ENST00000417271 RGPD5Q99666 1765 aa7.61□□□□□ -1.19
SLC8A1-210ENST00000417271 ANKRD26Q9UPS8 1709 aa7.61□□□□□ -1.19
SLC8A1-210ENST00000417271 NSD2O96028 1365 aa7.6□□□□□ -1.19
SLC8A1-210ENST00000417271 ERBB3P21860 1342 aa7.6□□□□□ -1.19
SLC8A1-210ENST00000417271 WDR17Q8IZU2 1322 aa7.6□□□□□ -1.19
SLC8A1-210ENST00000417271 HSP90AB2PQ58FF8 381 aa7.6□□□□□ -1.19
SLC8A1-210ENST00000417271 TOM1L2Q6ZVM7 507 aa7.6□□□□□ -1.19
SLC8A1-210ENST00000417271 NLRP2Q9NX02 1062 aa7.6□□□□□ -1.19
SLC8A1-210ENST00000417271 POLKQ9UBT6 870 aa7.6□□□□□ -1.19
SLC8A1-210ENST00000417271 ABCC6O95255 1503 aa7.6□□□□□ -1.19
SLC8A1-210ENST00000417271 CRB1P82279 1406 aa7.6□□□□□ -1.19
SLC8A1-210ENST00000417271 RTL1A6NKG5 1358 aa7.59□□□□□ -1.19
SLC8A1-210ENST00000417271 ZNF316A6NFI3 1004 aaPredicted RBP7.59□□□□□ -1.19
SLC8A1-210ENST00000417271 SEPT12Q8IYM1 358 aa7.59□□□□□ -1.19
SLC8A1-210ENST00000417271 USHBP1Q8N6Y0 703 aa7.59□□□□□ -1.19
SLC8A1-210ENST00000417271 BLMP54132 1417 aaPredicted RBP7.59□□□□□ -1.19
SLC8A1-210ENST00000417271 FLT4P35916 1363 aa7.59□□□□□ -1.2
SLC8A1-210ENST00000417271 CDK12Q9NYV4 1490 aaPredicted RBP7.58□□□□□ -1.2
SLC8A1-210ENST00000417271 FAM182BQ5T319 152 aa7.58□□□□□ -1.2
SLC8A1-210ENST00000417271 TCP11L2Q8N4U5 519 aa7.58□□□□□ -1.2
SLC8A1-210ENST00000417271 SMG6Q86US8 1419 aaKnown RBP7.58□□□□□ -1.2
SLC8A1-210ENST00000417271 INSRP06213 1382 aa7.58□□□□□ -1.2
SLC8A1-210ENST00000417271 NPC1L1Q9UHC9 1359 aa7.58□□□□□ -1.2
SLC8A1-210ENST00000417271 THSD7AQ9UPZ6 1657 aa7.57□□□□□ -1.2
SLC8A1-210ENST00000417271 NBPF6Q5VWK0 638 aa7.57□□□□□ -1.2
SLC8A1-210ENST00000417271 NBPF4Q96M43 638 aa7.57□□□□□ -1.2
SLC8A1-210ENST00000417271 DISP2A7MBM2 1401 aa7.56□□□□□ -1.2
SLC8A1-210ENST00000417271 ONECUT3O60422 494 aaPredicted RBP7.56□□□□□ -1.2
SLC8A1-210ENST00000417271 MTHFSP49914 203 aa7.56□□□□□ -1.2
SLC8A1-210ENST00000417271 EIF4A2Q14240 407 aaKnown RBP7.56□□□□□ -1.2
SLC8A1-210ENST00000417271 BARGINQ6ZT62 677 aa7.56□□□□□ -1.2
SLC8A1-210ENST00000417271 CARD10Q9BWT7 1032 aa7.56□□□□□ -1.2
SLC8A1-210ENST00000417271 RGPD2P0DJD1 1756 aa7.56□□□□□ -1.2
SLC8A1-210ENST00000417271 FAM208AQ9UK61 1670 aaKnown RBP7.55□□□□□ -1.2
SLC8A1-210ENST00000417271 PPP2R1AP30153 589 aa7.55□□□□□ -1.2
SLC8A1-210ENST00000417271 KRT27Q7Z3Y8 459 aa7.55□□□□□ -1.2
SLC8A1-210ENST00000417271 MEGF6O75095 1541 aa7.55□□□□□ -1.2
SLC8A1-210ENST00000417271 LRRC37A3O60309 1634 aa7.55□□□□□ -1.2
SLC8A1-210ENST00000417271 KIF24Q5T7B8 1368 aa7.55□□□□□ -1.2
SLC8A1-210ENST00000417271 PARD3Q8TEW0 1356 aa7.55□□□□□ -1.2
SLC8A1-210ENST00000417271 MAP2P11137 1827 aaKnown RBP7.55□□□□□ -1.2
SLC8A1-210ENST00000417271 BRWD3Q6RI45 1802 aa7.55□□□□□ -1.2
SLC8A1-210ENST00000417271 IL2RBP14784 551 aa7.54□□□□□ -1.2
SLC8A1-210ENST00000417271 AEBP1Q8IUX7 1158 aa7.54□□□□□ -1.2
SLC8A1-210ENST00000417271 EYA1Q99502 592 aa7.54□□□□□ -1.2
SLC8A1-210ENST00000417271 THRAP3Q9Y2W1 955 aaKnown RBP7.54□□□□□ -1.2
SLC8A1-210ENST00000417271 WNK3Q9BYP7 1800 aa7.54□□□□□ -1.2
SLC8A1-210ENST00000417271 COL3A1P02461 1466 aaPredicted RBP7.54□□□□□ -1.2
SLC8A1-210ENST00000417271 IL13P35225 146 aa7.53□□□□□ -1.2
SLC8A1-210ENST00000417271 TNS2Q63HR2 1409 aa7.52□□□□□ -1.2
SLC8A1-210ENST00000417271 PARP4Q9UKK3 1724 aaKnown RBP7.52□□□□□ -1.2
SLC8A1-210ENST00000417271 SOCS7O14512 581 aa7.52□□□□□ -1.21
SLC8A1-210ENST00000417271 PDE3BQ13370 1112 aa7.52□□□□□ -1.21
SLC8A1-210ENST00000417271 DDB1Q16531 1140 aa7.52□□□□□ -1.21
SLC8A1-210ENST00000417271 MARCH10Q8NA82 808 aaPredicted RBP7.52□□□□□ -1.21
SLC8A1-210ENST00000417271 OVOS2A0A0G2JMS6 1433 aa7.52□□□□□ -1.21
SLC8A1-210ENST00000417271 NCAPD2Q15021 1401 aa7.52□□□□□ -1.21
SLC8A1-210ENST00000417271 IGSF1Q8N6C5 1336 aa7.52□□□□□ -1.21
SLC8A1-210ENST00000417271 HMOX1P09601 288 aa7.51□□□□□ -1.21
SLC8A1-210ENST00000417271 CACNB1Q02641 598 aaPredicted RBP7.51□□□□□ -1.21
SLC8A1-210ENST00000417271 RAPGEF4Q8WZA2 1011 aa7.51□□□□□ -1.21
SLC8A1-210ENST00000417271 UPF1Q92900 1129 aaKnown RBP eCLIP7.51□□□□□ -1.21
SLC8A1-210ENST00000417271 CDCA7Q9BWT1 371 aaPredicted RBP7.51□□□□□ -1.21
SLC8A1-210ENST00000417271 RGPD1P0DJD0 1748 aa7.5□□□□□ -1.21
SLC8A1-210ENST00000417271 EXOC5O00471 708 aa7.5□□□□□ -1.21
SLC8A1-210ENST00000417271 U2SURPO15042 1029 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms