RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 MARCH10Q8NA82 808 aaPredicted RBP18.61■□□□□ 0.57
LINC00339-202ENST00000416769 DDB1Q16531 1140 aa18.6■□□□□ 0.57
LINC00339-202ENST00000416769 NBPF14Q5TI25 921 aa18.6■□□□□ 0.57
LINC00339-202ENST00000416769 PROM2Q8N271 834 aa18.6■□□□□ 0.57
LINC00339-202ENST00000416769 CASZ1Q86V15 1759 aa18.6■□□□□ 0.57
LINC00339-202ENST00000416769 TTC21BQ7Z4L5 1316 aa18.59■□□□□ 0.57
LINC00339-202ENST00000416769 BRD4O60885 1362 aaPredicted RBP18.58■□□□□ 0.57
LINC00339-202ENST00000416769 WDR17Q8IZU2 1322 aa18.58■□□□□ 0.57
LINC00339-202ENST00000416769 ARHGEF25Q86VW2 580 aa18.58■□□□□ 0.56
LINC00339-202ENST00000416769 NFAT5O94916 1531 aa18.58■□□□□ 0.56
LINC00339-202ENST00000416769 RGPD3A6NKT7 1758 aaPredicted RBP18.58■□□□□ 0.56
LINC00339-202ENST00000416769 RGPD4Q7Z3J3 1758 aa18.58■□□□□ 0.56
LINC00339-202ENST00000416769 KCNQ2O43526 872 aa18.57■□□□□ 0.56
LINC00339-202ENST00000416769 EVC2Q86UK5 1308 aa18.56■□□□□ 0.56
LINC00339-202ENST00000416769 SPON1Q9HCB6 807 aa18.56■□□□□ 0.56
LINC00339-202ENST00000416769 NEUROD1Q13562 356 aa18.55■□□□□ 0.56
LINC00339-202ENST00000416769 PPP1R1BQ9UD71 204 aaPredicted RBP18.55■□□□□ 0.56
LINC00339-202ENST00000416769 YY1P25490 414 aa18.54■□□□□ 0.56
LINC00339-202ENST00000416769 BCL11BQ9C0K0 894 aaPredicted RBP18.54■□□□□ 0.56
LINC00339-202ENST00000416769 ROCK2O75116 1388 aaKnown RBP18.54■□□□□ 0.56
LINC00339-202ENST00000416769 MYOM1P52179 1685 aa18.54■□□□□ 0.56
LINC00339-202ENST00000416769 PLSCR1O15162 318 aa18.53■□□□□ 0.56
LINC00339-202ENST00000416769 ZBTB7AO95365 584 aa18.53■□□□□ 0.56
LINC00339-202ENST00000416769 CSB-PGBD3P0DP91 1061 aa18.53■□□□□ 0.56
LINC00339-202ENST00000416769 MON2Q7Z3U7 1717 aa18.52■□□□□ 0.56
LINC00339-202ENST00000416769 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.51■□□□□ 0.55
LINC00339-202ENST00000416769 CARD10Q9BWT7 1032 aa18.51■□□□□ 0.55
LINC00339-202ENST00000416769 KTN1Q86UP2 1357 aaKnown RBP18.51■□□□□ 0.55
LINC00339-202ENST00000416769 CD163L1Q9NR16 1453 aa18.51■□□□□ 0.55
LINC00339-202ENST00000416769 NME9Q86XW9 330 aa18.5■□□□□ 0.55
LINC00339-202ENST00000416769 PCGF6Q9BYE7 350 aa18.5■□□□□ 0.55
LINC00339-202ENST00000416769 ATF5Q9Y2D1 282 aaPredicted RBP18.5■□□□□ 0.55
LINC00339-202ENST00000416769 TXNRD1Q16881 649 aa18.49■□□□□ 0.55
LINC00339-202ENST00000416769 ACSBG1Q96GR2 724 aa18.49■□□□□ 0.55
LINC00339-202ENST00000416769 NINLQ9Y2I6 1382 aa18.49■□□□□ 0.55
LINC00339-202ENST00000416769 BCL9O00512 1426 aa18.49■□□□□ 0.55
LINC00339-202ENST00000416769 TNS2Q63HR2 1409 aa18.49■□□□□ 0.55
LINC00339-202ENST00000416769 PTGER2P43116 358 aa18.48■□□□□ 0.55
LINC00339-202ENST00000416769 KCNH5Q8NCM2 988 aa18.48■□□□□ 0.55
LINC00339-202ENST00000416769 TTC21AQ8NDW8 1320 aa18.48■□□□□ 0.55
LINC00339-202ENST00000416769 LTN1O94822 1766 aa18.47■□□□□ 0.55
LINC00339-202ENST00000416769 SBNO2Q9Y2G9 1366 aa18.46■□□□□ 0.55
LINC00339-202ENST00000416769 C11orf95C9JLR9 678 aaPredicted RBP18.46■□□□□ 0.55
LINC00339-202ENST00000416769 ZNF692Q9BU19 519 aaPredicted RBP18.46■□□□□ 0.55
LINC00339-202ENST00000416769 NHSQ6T4R5 1651 aa18.46■□□□□ 0.55
LINC00339-202ENST00000416769 CDCA7Q9BWT1 371 aaPredicted RBP18.45■□□□□ 0.54
LINC00339-202ENST00000416769 KAT6BQ8WYB5 2073 aa18.45■□□□□ 0.54
LINC00339-202ENST00000416769 USP54Q70EL1 1684 aa18.44■□□□□ 0.54
LINC00339-202ENST00000416769 EXOC5O00471 708 aa18.44■□□□□ 0.54
LINC00339-202ENST00000416769 ERBB3P21860 1342 aa18.44■□□□□ 0.54
LINC00339-202ENST00000416769 ABCC6O95255 1503 aa18.44■□□□□ 0.54
LINC00339-202ENST00000416769 USP31Q70CQ4 1352 aa18.43■□□□□ 0.54
LINC00339-202ENST00000416769 CCDC7Q96M83 1385 aa18.43■□□□□ 0.54
LINC00339-202ENST00000416769 PAPPAQ13219 1627 aa18.43■□□□□ 0.54
LINC00339-202ENST00000416769 SLC12A5Q9H2X9 1139 aa18.43■□□□□ 0.54
LINC00339-202ENST00000416769 NLRP2Q9NX02 1062 aa18.43■□□□□ 0.54
LINC00339-202ENST00000416769 BTAF1O14981 1849 aa18.43■□□□□ 0.54
LINC00339-202ENST00000416769 SLC15A2Q16348 729 aa18.42■□□□□ 0.54
LINC00339-202ENST00000416769 STK32BQ9NY57 414 aa18.42■□□□□ 0.54
LINC00339-202ENST00000416769 UTRNP46939 3433 aa18.42■□□□□ 0.54
LINC00339-202ENST00000416769 ZNF827Q17R98 1081 aa18.41■□□□□ 0.54
LINC00339-202ENST00000416769 TMC1Q8TDI8 760 aa18.41■□□□□ 0.54
LINC00339-202ENST00000416769 FHDC1Q9C0D6 1143 aaPredicted RBP18.41■□□□□ 0.54
LINC00339-202ENST00000416769 SGIP1Q9BQI5 828 aa18.4■□□□□ 0.54
LINC00339-202ENST00000416769 ANKRD24Q8TF21 1146 aa18.39■□□□□ 0.53
LINC00339-202ENST00000416769 A0A1W2PP64 1363 aa18.39■□□□□ 0.53
LINC00339-202ENST00000416769 FBLN1P23142 703 aa18.38■□□□□ 0.53
LINC00339-202ENST00000416769 CARD11Q9BXL7 1154 aa18.38■□□□□ 0.53
LINC00339-202ENST00000416769 LRRC4BQ9NT99 713 aa18.38■□□□□ 0.53
LINC00339-202ENST00000416769 IL2RBP14784 551 aa18.37■□□□□ 0.53
LINC00339-202ENST00000416769 SYT17Q9BSW7 474 aa18.37■□□□□ 0.53
LINC00339-202ENST00000416769 KCNQ4P56696 695 aa18.36■□□□□ 0.53
LINC00339-202ENST00000416769 LTV1Q96GA3 475 aaPredicted RBP18.36■□□□□ 0.53
LINC00339-202ENST00000416769 RGPD2P0DJD1 1756 aa18.35■□□□□ 0.53
LINC00339-202ENST00000416769 MTFR1LQ9H019 292 aa18.35■□□□□ 0.53
LINC00339-202ENST00000416769 EDC4Q6P2E9 1401 aaKnown RBP18.34■□□□□ 0.53
LINC00339-202ENST00000416769 TUBGCP6Q96RT7 1819 aa18.33■□□□□ 0.53
LINC00339-202ENST00000416769 DCAF8L1A6NGE4 600 aa18.32■□□□□ 0.52
LINC00339-202ENST00000416769 ZNF784Q8NCA9 323 aaPredicted RBP18.32■□□□□ 0.52
LINC00339-202ENST00000416769 DDX54Q8TDD1 881 aaKnown RBP18.32■□□□□ 0.52
LINC00339-202ENST00000416769 SHANK3Q9BYB0 1731 aa18.32■□□□□ 0.52
LINC00339-202ENST00000416769 FAM208AQ9UK61 1670 aaKnown RBP18.31■□□□□ 0.52
LINC00339-202ENST00000416769 HDGFL2Q7Z4V5 671 aaPredicted RBP18.31■□□□□ 0.52
LINC00339-202ENST00000416769 DOT1LQ8TEK3 1739 aa18.31■□□□□ 0.52
LINC00339-202ENST00000416769 MAP3K19Q56UN5 1328 aa18.29■□□□□ 0.52
LINC00339-202ENST00000416769 IP6K1Q92551 441 aa18.29■□□□□ 0.52
LINC00339-202ENST00000416769 AKT1S1Q96B36 256 aa18.29■□□□□ 0.52
LINC00339-202ENST00000416769 ARXQ96QS3 562 aa18.29■□□□□ 0.52
LINC00339-202ENST00000416769 MEGF6O75095 1541 aa18.28■□□□□ 0.52
LINC00339-202ENST00000416769 TESK2Q96S53 571 aa18.28■□□□□ 0.52
LINC00339-202ENST00000416769 NSD2O96028 1365 aa18.28■□□□□ 0.52
LINC00339-202ENST00000416769 PNPLA7Q6ZV29 1317 aa18.27■□□□□ 0.52
LINC00339-202ENST00000416769 CHD4Q14839 1912 aa18.27■□□□□ 0.51
LINC00339-202ENST00000416769 KLHL34Q8N239 644 aa18.26■□□□□ 0.51
LINC00339-202ENST00000416769 SYTL4Q96C24 671 aaPredicted RBP18.26■□□□□ 0.51
LINC00339-202ENST00000416769 TERF2IPQ9NYB0 399 aa18.26■□□□□ 0.51
LINC00339-202ENST00000416769 ST20-MTHFSA0A0A6YYL1 179 aa18.25■□□□□ 0.51
LINC00339-202ENST00000416769 HOXC9P31274 260 aa18.25■□□□□ 0.51
LINC00339-202ENST00000416769 PRIM1P49642 420 aaKnown RBP18.25■□□□□ 0.51
LINC00339-202ENST00000416769 USHBP1Q8N6Y0 703 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms