RNA–Protein interactions for RNA: ENST00000416135.5

RAD50-202, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-202ENST00000416135 Q6ZVU0 165 aa11.12□□□□□ -0.63
RAD50-202ENST00000416135 LRRN4Q8WUT4 740 aa11.12□□□□□ -0.63
RAD50-202ENST00000416135 GPKOWQ92917 476 aaPredicted RBP eCLIP11.12□□□□□ -0.63
RAD50-202ENST00000416135 TTLL8A6PVC2 850 aa11.11□□□□□ -0.63
RAD50-202ENST00000416135 OCSTAMPQ9BR26 566 aa11.11□□□□□ -0.63
RAD50-202ENST00000416135 PTSQ03393 145 aa11.1□□□□□ -0.63
RAD50-202ENST00000416135 SPINT1O43278 529 aa11.09□□□□□ -0.63
RAD50-202ENST00000416135 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.09□□□□□ -0.63
RAD50-202ENST00000416135 FIGNL2A6NMB9 653 aa11.08□□□□□ -0.64
RAD50-202ENST00000416135 PDXDC2PQ6P474 469 aa11.08□□□□□ -0.64
RAD50-202ENST00000416135 LOC100996750A0A140TA64 210 aa11.07□□□□□ -0.64
RAD50-202ENST00000416135 KRTAP4-6Q9BYQ5 205 aa11.07□□□□□ -0.64
RAD50-202ENST00000416135 FKBPLQ9UIM3 349 aa11.07□□□□□ -0.64
RAD50-202ENST00000416135 KCTD15Q96SI1 283 aaPredicted RBP11.06□□□□□ -0.64
RAD50-202ENST00000416135 ARHGAP9Q9BRR9 750 aa11.06□□□□□ -0.64
RAD50-202ENST00000416135 RSPH6AQ9H0K4 717 aa11.06□□□□□ -0.64
RAD50-202ENST00000416135 KCNMA1Q12791 1236 aa11.05□□□□□ -0.64
RAD50-202ENST00000416135 NR6A1Q15406 480 aa11.05□□□□□ -0.64
RAD50-202ENST00000416135 CNTNAP3BQ96NU0 1288 aa11.05□□□□□ -0.64
RAD50-202ENST00000416135 CNTNAP3Q9BZ76 1288 aa11.05□□□□□ -0.64
RAD50-202ENST00000416135 INTS6LQ5JSJ4 861 aaKnown RBP11.04□□□□□ -0.64
RAD50-202ENST00000416135 RNFT1Q5M7Z0 435 aa11.04□□□□□ -0.64
RAD50-202ENST00000416135 CCDC155Q8N6L0 562 aa11.04□□□□□ -0.64
RAD50-202ENST00000416135 NANOS1Q8WY41 292 aaKnown RBP11.04□□□□□ -0.64
RAD50-202ENST00000416135 AGBL1Q96MI9 1066 aa11.04□□□□□ -0.64
RAD50-202ENST00000416135 PGPEP1Q9NXJ5 209 aa11.04□□□□□ -0.64
RAD50-202ENST00000416135 PROCA1Q8NCQ7 364 aaPredicted RBP11.03□□□□□ -0.64
RAD50-202ENST00000416135 SLC10A4Q96EP9 437 aa11.03□□□□□ -0.64
RAD50-202ENST00000416135 COL25A1Q9BXS0 654 aaPredicted RBP11.03□□□□□ -0.64
RAD50-202ENST00000416135 SLC35F4A4IF30 521 aa11.02□□□□□ -0.65
RAD50-202ENST00000416135 CTSOP43234 321 aaPredicted RBP11.02□□□□□ -0.65
RAD50-202ENST00000416135 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.02□□□□□ -0.65
RAD50-202ENST00000416135 PPP2R2DQ66LE6 453 aa11□□□□□ -0.65
RAD50-202ENST00000416135 EPS8L1Q8TE68 723 aa11□□□□□ -0.65
RAD50-202ENST00000416135 INSM2Q96T92 566 aaPredicted RBP11□□□□□ -0.65
RAD50-202ENST00000416135 SKIV2LQ15477 1246 aaKnown RBP10.99□□□□□ -0.65
RAD50-202ENST00000416135 CDV3Q9UKY7 258 aaKnown RBP10.99□□□□□ -0.65
RAD50-202ENST00000416135 ZC3H4Q9UPT8 1303 aaKnown RBP10.99□□□□□ -0.65
RAD50-202ENST00000416135 SENP3-EIF4A1A0A087X0R7 540 aa10.98□□□□□ -0.65
RAD50-202ENST00000416135 RELBQ01201 579 aa10.98□□□□□ -0.65
RAD50-202ENST00000416135 SH3D19Q5HYK7 790 aa10.98□□□□□ -0.65
RAD50-202ENST00000416135 ZNF385CQ66K41 422 aaPredicted RBP10.98□□□□□ -0.65
RAD50-202ENST00000416135 ZBTB33Q86T24 672 aa10.98□□□□□ -0.65
RAD50-202ENST00000416135 KCTD17Q8N5Z5 321 aa10.98□□□□□ -0.65
RAD50-202ENST00000416135 ADAM32Q8TC27 787 aa10.98□□□□□ -0.65
RAD50-202ENST00000416135 TMPRSS4Q9NRS4 437 aa10.98□□□□□ -0.65
RAD50-202ENST00000416135 ITGA6P23229 1130 aa10.97□□□□□ -0.65
RAD50-202ENST00000416135 DHX9Q08211 1270 aaKnown RBP10.97□□□□□ -0.65
RAD50-202ENST00000416135 KDF1Q8NAX2 398 aaPredicted RBP10.97□□□□□ -0.65
RAD50-202ENST00000416135 RNF217Q8TC41 542 aa10.97□□□□□ -0.65
RAD50-202ENST00000416135 WHAMMQ8TF30 809 aa10.97□□□□□ -0.65
RAD50-202ENST00000416135 GPBP1L1Q9HC44 474 aaPredicted RBP10.97□□□□□ -0.65
RAD50-202ENST00000416135 HMX1Q9NP08 348 aaPredicted RBP10.97□□□□□ -0.65
RAD50-202ENST00000416135 ADAMTS8Q9UP79 889 aa10.97□□□□□ -0.65
RAD50-202ENST00000416135 FAM117AQ9C073 453 aa10.96□□□□□ -0.65
RAD50-202ENST00000416135 VWA5B2Q8N398 1253 aa10.95□□□□□ -0.66
RAD50-202ENST00000416135 ZNF784Q8NCA9 323 aaPredicted RBP10.95□□□□□ -0.66
RAD50-202ENST00000416135 ZNF395Q9H8N7 513 aaPredicted RBP10.95□□□□□ -0.66
RAD50-202ENST00000416135 GPSM3Q9Y4H4 160 aa10.95□□□□□ -0.66
RAD50-202ENST00000416135 LILRA1O75019 489 aa10.94□□□□□ -0.66
RAD50-202ENST00000416135 SLURP2P0DP57 97 aa10.94□□□□□ -0.66
RAD50-202ENST00000416135 ADD1P35611 737 aaKnown RBP10.94□□□□□ -0.66
RAD50-202ENST00000416135 PTK2Q05397 1052 aa10.94□□□□□ -0.66
RAD50-202ENST00000416135 FOXD4L5Q5VV16 416 aaPredicted RBP10.94□□□□□ -0.66
RAD50-202ENST00000416135 RASSF7Q02833 373 aa10.93□□□□□ -0.66
RAD50-202ENST00000416135 KDM4CQ9H3R0 1056 aa10.93□□□□□ -0.66
RAD50-202ENST00000416135 ARHGEF15O94989 841 aa10.92□□□□□ -0.66
RAD50-202ENST00000416135 SUZ12Q15022 739 aaKnown RBP10.92□□□□□ -0.66
RAD50-202ENST00000416135 AP1G2O75843 785 aa10.91□□□□□ -0.66
RAD50-202ENST00000416135 POLMQ9NP87 494 aaPredicted RBP10.91□□□□□ -0.66
RAD50-202ENST00000416135 CDC14CA4D256 554 aa10.9□□□□□ -0.66
RAD50-202ENST00000416135 ERVH48-1M5A8F1 160 aa10.9□□□□□ -0.66
RAD50-202ENST00000416135 ADH1AP07327 375 aa10.9□□□□□ -0.66
RAD50-202ENST00000416135 TMEM151AQ8N4L1 468 aa10.9□□□□□ -0.66
RAD50-202ENST00000416135 CUEDC1Q9NWM3 386 aaPredicted RBP10.9□□□□□ -0.66
RAD50-202ENST00000416135 ESPNB1AK53 854 aa10.89□□□□□ -0.67
RAD50-202ENST00000416135 GDF11O95390 407 aa10.89□□□□□ -0.67
RAD50-202ENST00000416135 RAB15P59190 212 aa10.89□□□□□ -0.67
RAD50-202ENST00000416135 NBPF20Q3BBV1 942 aa10.89□□□□□ -0.67
RAD50-202ENST00000416135 SVOPQ8N4V2 548 aa10.89□□□□□ -0.67
RAD50-202ENST00000416135 USP17L8P0C7I0 530 aa10.88□□□□□ -0.67
RAD50-202ENST00000416135 SV2AQ7L0J3 742 aa10.88□□□□□ -0.67
RAD50-202ENST00000416135 PTGIRP43119 386 aa10.86□□□□□ -0.67
RAD50-202ENST00000416135 GAS6Q14393 721 aa10.86□□□□□ -0.67
RAD50-202ENST00000416135 DDRGK1Q96HY6 314 aa10.86□□□□□ -0.67
RAD50-202ENST00000416135 TRIM34Q9BYJ4 488 aa10.85□□□□□ -0.67
RAD50-202ENST00000416135 RNF225M0QZC1 329 aaPredicted RBP10.83□□□□□ -0.68
RAD50-202ENST00000416135 DZIP3Q86Y13 1208 aaKnown RBP10.83□□□□□ -0.68
RAD50-202ENST00000416135 ADAMTS2O95450 1211 aa10.82□□□□□ -0.68
RAD50-202ENST00000416135 RFC5P40937 340 aa10.82□□□□□ -0.68
RAD50-202ENST00000416135 LYPD4Q6UWN0 246 aa10.82□□□□□ -0.68
RAD50-202ENST00000416135 CYLDQ9NQC7 956 aa10.82□□□□□ -0.68
RAD50-202ENST00000416135 IRS1P35568 1242 aa10.8□□□□□ -0.68
RAD50-202ENST00000416135 LYSMD3Q7Z3D4 306 aa10.8□□□□□ -0.68
RAD50-202ENST00000416135 RHOQP17081 205 aa10.78□□□□□ -0.68
RAD50-202ENST00000416135 RNF144AP50876 292 aaPredicted RBP10.78□□□□□ -0.68
RAD50-202ENST00000416135 SRSF11Q05519 484 aaKnown RBP10.78□□□□□ -0.68
RAD50-202ENST00000416135 ATP1B4Q9UN42 357 aaPredicted RBP10.78□□□□□ -0.68
RAD50-202ENST00000416135 PRICKLE2Q7Z3G6 844 aa10.77□□□□□ -0.69
RAD50-202ENST00000416135 SEPT12Q8IYM1 358 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms