RNA–Protein interactions for RNA: ENST00000416135.5

RAD50-202, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-202ENST00000416135 AEBP2Q6ZN18 517 aaPredicted RBP33.36■■■□□ 2.93
RAD50-202ENST00000416135 CHIC1Q5VXU3 224 aa31.52■■■□□ 2.64
RAD50-202ENST00000416135 SENP3Q9H4L4 574 aaPredicted RBP28.3■■■□□ 2.12
RAD50-202ENST00000416135 PHF23Q9BUL5 403 aaPredicted RBP27.98■■■□□ 2.07
RAD50-202ENST00000416135 FOXD1Q16676 465 aa26.49■■□□□ 1.83
RAD50-202ENST00000416135 PLPPR3Q6T4P5 718 aa25.08■■□□□ 1.61
RAD50-202ENST00000416135 PPP6R1Q9UPN7 881 aa24.78■■□□□ 1.56
RAD50-202ENST00000416135 MSH5O43196 834 aa24.68■■□□□ 1.54
RAD50-202ENST00000416135 PIAS4Q8N2W9 510 aaPredicted RBP24.66■■□□□ 1.54
RAD50-202ENST00000416135 ADRA2BP18089 450 aa24.64■■□□□ 1.54
RAD50-202ENST00000416135 POTEDQ86YR6 584 aa24.31■■□□□ 1.48
RAD50-202ENST00000416135 MAPK8IP2Q13387 824 aaPredicted RBP22.68■■□□□ 1.22
RAD50-202ENST00000416135 DMRT2Q9Y5R5 561 aa22.49■■□□□ 1.19
RAD50-202ENST00000416135 SCAF1Q9H7N4 1312 aaKnown RBP22.35■■□□□ 1.17
RAD50-202ENST00000416135 PPP4R3CPQ6ZMV5 832 aa22.02■■□□□ 1.12
RAD50-202ENST00000416135 HOXD11P31277 338 aaPredicted RBP21.65■■□□□ 1.06
RAD50-202ENST00000416135 CNKSR2Q8WXI2 1034 aa21.59■■□□□ 1.05
RAD50-202ENST00000416135 DCAF8L1A6NGE4 600 aa21.46■■□□□ 1.03
RAD50-202ENST00000416135 RNF216Q9NWF9 866 aaPredicted RBP21.42■■□□□ 1.02
RAD50-202ENST00000416135 CACNB1Q02641 598 aaPredicted RBP21.22■□□□□ 0.99
RAD50-202ENST00000416135 RNF39Q9H2S5 420 aa21.15■□□□□ 0.98
RAD50-202ENST00000416135 NCBP3Q53F19 620 aaKnown RBP21.04■□□□□ 0.96
RAD50-202ENST00000416135 NPM3O75607 178 aaKnown RBP20.89■□□□□ 0.93
RAD50-202ENST00000416135 DNAJC5BQ9UF47 199 aa20.86■□□□□ 0.93
RAD50-202ENST00000416135 C1QBPQ07021 282 aaKnown RBP20.76■□□□□ 0.91
RAD50-202ENST00000416135 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.52■□□□□ 0.887e-7■■■■□ 22
RAD50-202ENST00000416135 KCNA4P22459 653 aa20.46■□□□□ 0.87
RAD50-202ENST00000416135 U3KPZ7 1027 aaPredicted RBP20.21■□□□□ 0.83
RAD50-202ENST00000416135 SLC4A2P04920 1241 aa20.02■□□□□ 0.8
RAD50-202ENST00000416135 SPINK5Q9NQ38 1064 aaPredicted RBP19.94■□□□□ 0.78
RAD50-202ENST00000416135 CAPN15O75808 1086 aa19.8■□□□□ 0.76
RAD50-202ENST00000416135 DSG3P32926 999 aa19.79■□□□□ 0.76
RAD50-202ENST00000416135 TRHP20396 242 aaPredicted RBP19.47■□□□□ 0.71
RAD50-202ENST00000416135 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.42■□□□□ 0.7
RAD50-202ENST00000416135 HNRNPUL2Q1KMD3 747 aaKnown RBP19.42■□□□□ 0.7
RAD50-202ENST00000416135 APLP2Q06481 763 aa19.41■□□□□ 0.7
RAD50-202ENST00000416135 ABCB7O75027 752 aa19.4■□□□□ 0.7
RAD50-202ENST00000416135 ZNF219Q9P2Y4 722 aaPredicted RBP19.4■□□□□ 0.7
RAD50-202ENST00000416135 SAMD1Q6SPF0 538 aaPredicted RBP19.36■□□□□ 0.69
RAD50-202ENST00000416135 MYCNP04198 464 aaPredicted RBP19.24■□□□□ 0.67
RAD50-202ENST00000416135 SLC4A1APQ9BWU0 796 aaKnown RBP19.22■□□□□ 0.67
RAD50-202ENST00000416135 FOXD4L1Q9NU39 408 aa19.03■□□□□ 0.64
RAD50-202ENST00000416135 POTEHQ6S545 545 aa19■□□□□ 0.63
RAD50-202ENST00000416135 POLA2Q14181 598 aa18.97■□□□□ 0.63
RAD50-202ENST00000416135 ATF5Q9Y2D1 282 aaPredicted RBP18.95■□□□□ 0.62
RAD50-202ENST00000416135 ZBTB22O15209 634 aa18.89■□□□□ 0.61
RAD50-202ENST00000416135 RBM42Q9BTD8 480 aaKnown RBP18.74■□□□□ 0.59
RAD50-202ENST00000416135 ZBTB12Q9Y330 459 aaPredicted RBP18.48■□□□□ 0.55
RAD50-202ENST00000416135 CHRDL2Q6WN34 429 aa18.45■□□□□ 0.54
RAD50-202ENST00000416135 ATXN8OSP0DMR3 200 aa18.42■□□□□ 0.54
RAD50-202ENST00000416135 OSCARQ8IYS5 282 aa18.41■□□□□ 0.54
RAD50-202ENST00000416135 AKT1S1Q96B36 256 aa18.35■□□□□ 0.53
RAD50-202ENST00000416135 REM2Q8IYK8 340 aaPredicted RBP18.23■□□□□ 0.51
RAD50-202ENST00000416135 PITPNM1O00562 1244 aa18.07■□□□□ 0.48
RAD50-202ENST00000416135 MKRN4PQ13434 485 aaPredicted RBP18.07■□□□□ 0.48
RAD50-202ENST00000416135 PIP4P2Q8N4L2 257 aa18.04■□□□□ 0.48
RAD50-202ENST00000416135 FBLN2P98095 1184 aa18■□□□□ 0.47
RAD50-202ENST00000416135 SPDYE2BA6NHP3 402 aa17.97■□□□□ 0.47
RAD50-202ENST00000416135 SPDYE6P0CI01 402 aa17.97■□□□□ 0.47
RAD50-202ENST00000416135 SPDYE2Q495Y8 402 aa17.97■□□□□ 0.47
RAD50-202ENST00000416135 FXR2P51116 673 aaKnown RBP eCLIP17.91■□□□□ 0.464e-7■■■■■ 31.7
RAD50-202ENST00000416135 CSRNP3Q8WYN3 585 aa17.89■□□□□ 0.45
RAD50-202ENST00000416135 SSUH2Q9Y2M2 353 aa17.8■□□□□ 0.44
RAD50-202ENST00000416135 SP7Q8TDD2 431 aaPredicted RBP17.78■□□□□ 0.44
RAD50-202ENST00000416135 ZNF692Q9BU19 519 aaPredicted RBP17.73■□□□□ 0.43
RAD50-202ENST00000416135 HAX1O00165 279 aa17.64■□□□□ 0.41
RAD50-202ENST00000416135 SPDYE1Q8NFV5 336 aaPredicted RBP17.64■□□□□ 0.41
RAD50-202ENST00000416135 CLEC11AQ9Y240 323 aa17.62■□□□□ 0.41
RAD50-202ENST00000416135 EVX2Q03828 476 aa17.59■□□□□ 0.41
RAD50-202ENST00000416135 EHMT2Q96KQ7 1210 aa17.56■□□□□ 0.4
RAD50-202ENST00000416135 PRKAR2AP13861 404 aaKnown RBP17.55■□□□□ 0.4
RAD50-202ENST00000416135 PABPN1Q86U42 306 aaKnown RBP eCLIP17.5■□□□□ 0.39
RAD50-202ENST00000416135 CHADLQ6NUI6 762 aa17.38■□□□□ 0.37
RAD50-202ENST00000416135 C19orf67A6NJJ6 358 aa17.34■□□□□ 0.37
RAD50-202ENST00000416135 PRR29P0C7W0 189 aa17.31■□□□□ 0.36
RAD50-202ENST00000416135 GABBR2O75899 941 aa17.09■□□□□ 0.33
RAD50-202ENST00000416135 FARP1Q9Y4F1 1045 aaPredicted RBP17.08■□□□□ 0.32
RAD50-202ENST00000416135 SPDYE4A6NLX3 237 aa17.06■□□□□ 0.32
RAD50-202ENST00000416135 CD44P16070 742 aaKnown RBP16.98■□□□□ 0.31
RAD50-202ENST00000416135 CREBZFQ9NS37 354 aa16.98■□□□□ 0.31
RAD50-202ENST00000416135 STAG3Q9UJ98 1225 aa16.91■□□□□ 0.3
RAD50-202ENST00000416135 POTEIP0CG38 1075 aa16.82■□□□□ 0.28
RAD50-202ENST00000416135 PROM2Q8N271 834 aa16.75■□□□□ 0.27
RAD50-202ENST00000416135 ZNF579Q8NAF0 562 aaKnown RBP16.74■□□□□ 0.27
RAD50-202ENST00000416135 MNX1P50219 401 aaPredicted RBP16.73■□□□□ 0.27
RAD50-202ENST00000416135 ZRANB1Q9UGI0 708 aa16.72■□□□□ 0.27
RAD50-202ENST00000416135 CLCN6P51797 869 aa16.65■□□□□ 0.26
RAD50-202ENST00000416135 LHX8Q68G74 356 aa16.65■□□□□ 0.26
RAD50-202ENST00000416135 GALR2O43603 387 aaPredicted RBP16.58■□□□□ 0.24
RAD50-202ENST00000416135 PHF12Q96QT6 1004 aa16.55■□□□□ 0.24
RAD50-202ENST00000416135 NPM1P06748 294 aaKnown RBP eCLIP16.51■□□□□ 0.23
RAD50-202ENST00000416135 DCBLD2Q96PD2 775 aa16.51■□□□□ 0.23
RAD50-202ENST00000416135 PAK3O75914 559 aaPredicted RBP16.45■□□□□ 0.22
RAD50-202ENST00000416135 MS4A3Q96HJ5 214 aa16.32■□□□□ 0.2
RAD50-202ENST00000416135 PELP1Q8IZL8 1130 aaKnown RBP16.31■□□□□ 0.2
RAD50-202ENST00000416135 TSPYL2Q9H2G4 693 aaPredicted RBP16.29■□□□□ 0.2
RAD50-202ENST00000416135 CCDC61Q9Y6R9 512 aa16.29■□□□□ 0.2
RAD50-202ENST00000416135 POTEB2H3BUK9 544 aa16.27■□□□□ 0.2
RAD50-202ENST00000416135 MIER1Q8N108 512 aa16.23■□□□□ 0.19
RAD50-202ENST00000416135 ASTLQ6HA08 431 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms