RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 FNBP4Q8N3X1 1017 aaPredicted RBP14.16□□□□□ -0.14
HLA-DMB-257ENST00000414017 AXIN2Q9Y2T1 843 aa14.16□□□□□ -0.14
HLA-DMB-257ENST00000414017 LTN1O94822 1766 aa14.16□□□□□ -0.14
HLA-DMB-257ENST00000414017 AATKQ6ZMQ8 1374 aa14.15□□□□□ -0.14
HLA-DMB-257ENST00000414017 QTRT2Q9H974 415 aaKnown RBP14.15□□□□□ -0.14
HLA-DMB-257ENST00000414017 SLIT2O94813 1529 aa14.15□□□□□ -0.14
HLA-DMB-257ENST00000414017 HOXC9P31274 260 aa14.14□□□□□ -0.15
HLA-DMB-257ENST00000414017 USP35Q9P2H5 1018 aa14.14□□□□□ -0.15
HLA-DMB-257ENST00000414017 POLKQ9UBT6 870 aa14.14□□□□□ -0.15
HLA-DMB-257ENST00000414017 RGS17Q9UGC6 210 aaPredicted RBP14.14□□□□□ -0.15
HLA-DMB-257ENST00000414017 CAMTA1Q9Y6Y1 1673 aa14.14□□□□□ -0.15
HLA-DMB-257ENST00000414017 NPC1L1Q9UHC9 1359 aa14.13□□□□□ -0.15
HLA-DMB-257ENST00000414017 LARP1Q6PKG0 1096 aaKnown RBP14.13□□□□□ -0.15
HLA-DMB-257ENST00000414017 TOM1L2Q6ZVM7 507 aa14.13□□□□□ -0.15
HLA-DMB-257ENST00000414017 ANKRD24Q8TF21 1146 aa14.13□□□□□ -0.15
HLA-DMB-257ENST00000414017 IP6K1Q92551 441 aa14.13□□□□□ -0.15
HLA-DMB-257ENST00000414017 TRPC5Q9UL62 973 aaPredicted RBP14.13□□□□□ -0.15
HLA-DMB-257ENST00000414017 BCL9LQ86UU0 1499 aa14.12□□□□□ -0.15
HLA-DMB-257ENST00000414017 HSP90AB2PQ58FF8 381 aa14.12□□□□□ -0.15
HLA-DMB-257ENST00000414017 POTEAQ6S8J7 498 aa14.12□□□□□ -0.15
HLA-DMB-257ENST00000414017 RGPD5Q99666 1765 aa14.11□□□□□ -0.15
HLA-DMB-257ENST00000414017 FLT4P35916 1363 aa14.11□□□□□ -0.15
HLA-DMB-257ENST00000414017 MAP2P11137 1827 aaKnown RBP14.11□□□□□ -0.15
HLA-DMB-257ENST00000414017 A0A0G2JS52 829 aa14.11□□□□□ -0.15
HLA-DMB-257ENST00000414017 MYT1Q01538 1121 aa14.11□□□□□ -0.15
HLA-DMB-257ENST00000414017 NLRP2Q9NX02 1062 aa14.11□□□□□ -0.15
HLA-DMB-257ENST00000414017 COL5A2P05997 1499 aaPredicted RBP14.11□□□□□ -0.15
HLA-DMB-257ENST00000414017 LMO7Q8WWI1 1683 aa14.1□□□□□ -0.15
HLA-DMB-257ENST00000414017 RTL1A6NKG5 1358 aa14.1□□□□□ -0.15
HLA-DMB-257ENST00000414017 NRAPQ86VF7 1730 aa14.1□□□□□ -0.15
HLA-DMB-257ENST00000414017 PEAK1Q9H792 1746 aa14.1□□□□□ -0.15
HLA-DMB-257ENST00000414017 NWD2Q9ULI1 1742 aa14.1□□□□□ -0.15
HLA-DMB-257ENST00000414017 COL18A1P39060 1754 aa14.1□□□□□ -0.15
HLA-DMB-257ENST00000414017 MTHFSP49914 203 aa14.1□□□□□ -0.15
HLA-DMB-257ENST00000414017 VPS72Q15906 364 aa14.1□□□□□ -0.15
HLA-DMB-257ENST00000414017 ATRNO75882 1429 aa14.09□□□□□ -0.15
HLA-DMB-257ENST00000414017 SMG6Q86US8 1419 aaKnown RBP14.09□□□□□ -0.15
HLA-DMB-257ENST00000414017 RXRBP28702 533 aa14.09□□□□□ -0.15
HLA-DMB-257ENST00000414017 PPP2R1AP30153 589 aa14.09□□□□□ -0.15
HLA-DMB-257ENST00000414017 WDR17Q8IZU2 1322 aa14.09□□□□□ -0.15
HLA-DMB-257ENST00000414017 BLMP54132 1417 aaPredicted RBP14.08□□□□□ -0.15
HLA-DMB-257ENST00000414017 ANP32CO43423 234 aa14.08□□□□□ -0.16
HLA-DMB-257ENST00000414017 RALBP1Q15311 655 aa14.08□□□□□ -0.16
HLA-DMB-257ENST00000414017 GJD4Q96KN9 370 aaPredicted RBP14.08□□□□□ -0.16
HLA-DMB-257ENST00000414017 ERBB3P21860 1342 aa14.08□□□□□ -0.16
HLA-DMB-257ENST00000414017 ABCC6O95255 1503 aa14.07□□□□□ -0.16
HLA-DMB-257ENST00000414017 RBM6P78332 1123 aaKnown RBP14.07□□□□□ -0.16
HLA-DMB-257ENST00000414017 FAM98CQ17RN3 349 aaKnown RBP14.07□□□□□ -0.16
HLA-DMB-257ENST00000414017 USHBP1Q8N6Y0 703 aa14.07□□□□□ -0.16
HLA-DMB-257ENST00000414017 SPATA31A5Q5VU36 1347 aa14.07□□□□□ -0.16
HLA-DMB-257ENST00000414017 SPATA31A7Q8IWB4 1347 aa14.07□□□□□ -0.16
HLA-DMB-257ENST00000414017 INSRP06213 1382 aa14.07□□□□□ -0.16
HLA-DMB-257ENST00000414017 PARD3Q8TEW0 1356 aa14.07□□□□□ -0.16
HLA-DMB-257ENST00000414017 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.07□□□□□ -0.16
HLA-DMB-257ENST00000414017 CRB1P82279 1406 aa14.07□□□□□ -0.16
HLA-DMB-257ENST00000414017 CFAP53Q96M91 514 aa14.06□□□□□ -0.16
HLA-DMB-257ENST00000414017 SPATA31A1Q5TZJ5 1347 aa14.06□□□□□ -0.16
HLA-DMB-257ENST00000414017 KIF24Q5T7B8 1368 aa14.06□□□□□ -0.16
HLA-DMB-257ENST00000414017 EIF4A2Q14240 407 aaKnown RBP14.05□□□□□ -0.16
HLA-DMB-257ENST00000414017 TCP11L2Q8N4U5 519 aa14.05□□□□□ -0.16
HLA-DMB-257ENST00000414017 PRKRIP1Q9H875 184 aaPredicted RBP14.05□□□□□ -0.16
HLA-DMB-257ENST00000414017 CDK12Q9NYV4 1490 aaPredicted RBP14.05□□□□□ -0.16
HLA-DMB-257ENST00000414017 NBPF6Q5VWK0 638 aa14.04□□□□□ -0.16
HLA-DMB-257ENST00000414017 NBPF4Q96M43 638 aa14.04□□□□□ -0.16
HLA-DMB-257ENST00000414017 MYBBP1AQ9BQG0 1328 aaKnown RBP14.04□□□□□ -0.16
HLA-DMB-257ENST00000414017 U2SURPO15042 1029 aaKnown RBP14.03□□□□□ -0.16
HLA-DMB-257ENST00000414017 DIAPH1O60610 1272 aaKnown RBP14.03□□□□□ -0.16
HLA-DMB-257ENST00000414017 CARD10Q9BWT7 1032 aa14.03□□□□□ -0.16
HLA-DMB-257ENST00000414017 GLI3P10071 1580 aa14.03□□□□□ -0.16
HLA-DMB-257ENST00000414017 RGPD2P0DJD1 1756 aa14.01□□□□□ -0.17
HLA-DMB-257ENST00000414017 DIEXFQ68CQ4 756 aaKnown RBP14.01□□□□□ -0.17
HLA-DMB-257ENST00000414017 SEPT12Q8IYM1 358 aa14.01□□□□□ -0.17
HLA-DMB-257ENST00000414017 EYA1Q99502 592 aa14.01□□□□□ -0.17
HLA-DMB-257ENST00000414017 IL13P35225 146 aa14□□□□□ -0.17
HLA-DMB-257ENST00000414017 MAPK8IP2Q13387 824 aaPredicted RBP14□□□□□ -0.17
HLA-DMB-257ENST00000414017 THRAP3Q9Y2W1 955 aaKnown RBP14□□□□□ -0.17
HLA-DMB-257ENST00000414017 FAM208AQ9UK61 1670 aaKnown RBP13.99□□□□□ -0.17
HLA-DMB-257ENST00000414017 HMOX1P09601 288 aa13.99□□□□□ -0.17
HLA-DMB-257ENST00000414017 IL2RBP14784 551 aa13.99□□□□□ -0.17
HLA-DMB-257ENST00000414017 RAPGEF4Q8WZA2 1011 aa13.99□□□□□ -0.17
HLA-DMB-257ENST00000414017 NUDCQ9Y266 331 aa13.99□□□□□ -0.17
HLA-DMB-257ENST00000414017 RGS12O14924 1447 aa13.98□□□□□ -0.17
HLA-DMB-257ENST00000414017 SULT6B1Q6IMI4 303 aa13.98□□□□□ -0.17
HLA-DMB-257ENST00000414017 BARGINQ6ZT62 677 aa13.98□□□□□ -0.17
HLA-DMB-257ENST00000414017 TATP17735 454 aaPredicted RBP13.97□□□□□ -0.17
HLA-DMB-257ENST00000414017 AEBP1Q8IUX7 1158 aa13.97□□□□□ -0.17
HLA-DMB-257ENST00000414017 COL3A1P02461 1466 aaPredicted RBP13.97□□□□□ -0.17
HLA-DMB-257ENST00000414017 U2AF1L5P0DN76 240 aaPredicted RBP13.96□□□□□ -0.17
HLA-DMB-257ENST00000414017 U2AF1Q01081 240 aaKnown RBP eCLIP13.96□□□□□ -0.17
HLA-DMB-257ENST00000414017 PDE3BQ13370 1112 aa13.96□□□□□ -0.17
HLA-DMB-257ENST00000414017 DDB1Q16531 1140 aa13.96□□□□□ -0.17
HLA-DMB-257ENST00000414017 ILDR2Q71H61 639 aa13.96□□□□□ -0.17
HLA-DMB-257ENST00000414017 IGSF1Q8N6C5 1336 aa13.95□□□□□ -0.18
HLA-DMB-257ENST00000414017 EXOC5O00471 708 aa13.95□□□□□ -0.18
HLA-DMB-257ENST00000414017 FAM182BQ5T319 152 aa13.95□□□□□ -0.18
HLA-DMB-257ENST00000414017 CDCA7Q9BWT1 371 aaPredicted RBP13.95□□□□□ -0.18
HLA-DMB-257ENST00000414017 MEGF6O75095 1541 aa13.95□□□□□ -0.18
HLA-DMB-257ENST00000414017 WDR43Q15061 677 aaKnown RBP eCLIP13.94□□□□□ -0.18
HLA-DMB-257ENST00000414017 KRT27Q7Z3Y8 459 aa13.94□□□□□ -0.18
HLA-DMB-257ENST00000414017 DDX54Q8TDD1 881 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms