RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 SBF2Q86WG5 1849 aa12.08□□□□□ -0.48
UPF3AP1-201ENST00000413731 KIAA1210Q9ULL0 1709 aa12.08□□□□□ -0.48
UPF3AP1-201ENST00000413731 TRIM37O94972 964 aa12.07□□□□□ -0.48
UPF3AP1-201ENST00000413731 RGPD3A6NKT7 1758 aaPredicted RBP12.07□□□□□ -0.48
UPF3AP1-201ENST00000413731 RGPD4Q7Z3J3 1758 aa12.07□□□□□ -0.48
UPF3AP1-201ENST00000413731 LRRC37A3O60309 1634 aa12.07□□□□□ -0.48
UPF3AP1-201ENST00000413731 PEAK1Q9H792 1746 aa12.06□□□□□ -0.48
UPF3AP1-201ENST00000413731 NUTM2GQ5VZR2 741 aa12.06□□□□□ -0.48
UPF3AP1-201ENST00000413731 DCAF11Q8TEB1 546 aa12.06□□□□□ -0.48
UPF3AP1-201ENST00000413731 CAMKK2Q96RR4 588 aa12.06□□□□□ -0.48
UPF3AP1-201ENST00000413731 POLR3AO14802 1390 aaPredicted RBP12.05□□□□□ -0.48
UPF3AP1-201ENST00000413731 PARD3Q8TEW0 1356 aa12.05□□□□□ -0.48
UPF3AP1-201ENST00000413731 ZC3H6P61129 1189 aaKnown RBP12.05□□□□□ -0.48
UPF3AP1-201ENST00000413731 NUDT16Q96DE0 195 aaKnown RBP12.05□□□□□ -0.48
UPF3AP1-201ENST00000413731 USP35Q9P2H5 1018 aa12.05□□□□□ -0.48
UPF3AP1-201ENST00000413731 QRICH2Q9H0J4 1663 aa12.05□□□□□ -0.48
UPF3AP1-201ENST00000413731 FAM196AQ6ZSG2 479 aa12.04□□□□□ -0.48
UPF3AP1-201ENST00000413731 AKAP12Q02952 1782 aa12.03□□□□□ -0.48
UPF3AP1-201ENST00000413731 APBA3O96018 575 aa12.03□□□□□ -0.48
UPF3AP1-201ENST00000413731 CASZ1Q86V15 1759 aa12.02□□□□□ -0.48
UPF3AP1-201ENST00000413731 COL5A2P05997 1499 aaPredicted RBP12.02□□□□□ -0.48
UPF3AP1-201ENST00000413731 BARGINQ6ZT62 677 aa12.02□□□□□ -0.49
UPF3AP1-201ENST00000413731 USP19O94966 1318 aa12.02□□□□□ -0.49
UPF3AP1-201ENST00000413731 ACEP12821 1306 aa12.02□□□□□ -0.49
UPF3AP1-201ENST00000413731 CPDO75976 1380 aa12.02□□□□□ -0.49
UPF3AP1-201ENST00000413731 RGPD5Q99666 1765 aa12.02□□□□□ -0.49
UPF3AP1-201ENST00000413731 PIK3C2AO00443 1686 aa12.01□□□□□ -0.49
UPF3AP1-201ENST00000413731 COL18A1P39060 1754 aa12.01□□□□□ -0.49
UPF3AP1-201ENST00000413731 CACNB1Q02641 598 aaPredicted RBP12.01□□□□□ -0.49
UPF3AP1-201ENST00000413731 LARP1Q6PKG0 1096 aaKnown RBP12.01□□□□□ -0.49
UPF3AP1-201ENST00000413731 CDK19Q9BWU1 502 aa12.01□□□□□ -0.49
UPF3AP1-201ENST00000413731 SLIT3O75094 1523 aa12□□□□□ -0.49
UPF3AP1-201ENST00000413731 PDE3BQ13370 1112 aa11.99□□□□□ -0.49
UPF3AP1-201ENST00000413731 NBPF8Q3BBV2 869 aa11.99□□□□□ -0.49
UPF3AP1-201ENST00000413731 TCP11L2Q8N4U5 519 aa11.99□□□□□ -0.49
UPF3AP1-201ENST00000413731 PPIP5K1Q6PFW1 1433 aa11.99□□□□□ -0.49
UPF3AP1-201ENST00000413731 MYOM1P52179 1685 aa11.98□□□□□ -0.49
UPF3AP1-201ENST00000413731 OVOS2A0A0G2JMS6 1433 aa11.98□□□□□ -0.49
UPF3AP1-201ENST00000413731 OVOS2A0A0J9YW53 1432 aa11.98□□□□□ -0.49
UPF3AP1-201ENST00000413731 OVOS2Q6IE36 1432 aa11.98□□□□□ -0.49
UPF3AP1-201ENST00000413731 DSG3P32926 999 aa11.98□□□□□ -0.49
UPF3AP1-201ENST00000413731 EVA1CP58658 441 aa11.98□□□□□ -0.49
UPF3AP1-201ENST00000413731 HS6ST3Q8IZP7 471 aa11.98□□□□□ -0.49
UPF3AP1-201ENST00000413731 ABTB2Q8N961 1025 aa11.98□□□□□ -0.49
UPF3AP1-201ENST00000413731 CRB1P82279 1406 aa11.97□□□□□ -0.49
UPF3AP1-201ENST00000413731 PLEKHG3A1L390 1219 aa11.97□□□□□ -0.49
UPF3AP1-201ENST00000413731 STAC3Q96MF2 364 aa11.97□□□□□ -0.49
UPF3AP1-201ENST00000413731 CCDC61Q9Y6R9 512 aa11.97□□□□□ -0.49
UPF3AP1-201ENST00000413731 USP6P35125 1406 aa11.95□□□□□ -0.5
UPF3AP1-201ENST00000413731 TRIM26Q12899 539 aaPredicted RBP11.95□□□□□ -0.5
UPF3AP1-201ENST00000413731 THRAP3Q9Y2W1 955 aaKnown RBP11.95□□□□□ -0.5
UPF3AP1-201ENST00000413731 NINLQ9Y2I6 1382 aa11.94□□□□□ -0.5
UPF3AP1-201ENST00000413731 TRPM1Q7Z4N2 1603 aa11.94□□□□□ -0.5
UPF3AP1-201ENST00000413731 ZBTB7CA1YPR0 619 aa11.94□□□□□ -0.5
UPF3AP1-201ENST00000413731 GCP02774 474 aa11.94□□□□□ -0.5
UPF3AP1-201ENST00000413731 YY1P25490 414 aa11.94□□□□□ -0.5
UPF3AP1-201ENST00000413731 NBPF1Q3BBV0 1214 aa11.94□□□□□ -0.5
UPF3AP1-201ENST00000413731 NBPF14Q5TI25 921 aa11.94□□□□□ -0.5
UPF3AP1-201ENST00000413731 ANO8Q9HCE9 1232 aaPredicted RBP11.94□□□□□ -0.5
UPF3AP1-201ENST00000413731 SRPK2P78362 688 aaKnown RBP11.93□□□□□ -0.5
UPF3AP1-201ENST00000413731 NLRP13Q86W25 1043 aa11.93□□□□□ -0.5
UPF3AP1-201ENST00000413731 CABP2Q9NPB3 220 aa11.93□□□□□ -0.5
UPF3AP1-201ENST00000413731 CPSF1Q10570 1443 aaKnown RBP11.93□□□□□ -0.5
UPF3AP1-201ENST00000413731 AATKQ6ZMQ8 1374 aa11.92□□□□□ -0.5
UPF3AP1-201ENST00000413731 CENPJQ9HC77 1338 aaPredicted RBP11.92□□□□□ -0.5
UPF3AP1-201ENST00000413731 GSE1Q14687 1217 aa11.92□□□□□ -0.5
UPF3AP1-201ENST00000413731 PTF1AQ7RTS3 328 aa11.92□□□□□ -0.5
UPF3AP1-201ENST00000413731 SPON1Q9HCB6 807 aa11.92□□□□□ -0.5
UPF3AP1-201ENST00000413731 PPP1R1BQ9UD71 204 aaPredicted RBP11.92□□□□□ -0.5
UPF3AP1-201ENST00000413731 MON2Q7Z3U7 1717 aa11.91□□□□□ -0.5
UPF3AP1-201ENST00000413731 NHSQ6T4R5 1651 aa11.91□□□□□ -0.5
UPF3AP1-201ENST00000413731 KCNQ2O43526 872 aa11.91□□□□□ -0.5
UPF3AP1-201ENST00000413731 BRD4O60885 1362 aaPredicted RBP11.91□□□□□ -0.5
UPF3AP1-201ENST00000413731 NFAT5O94916 1531 aa11.91□□□□□ -0.5
UPF3AP1-201ENST00000413731 LTN1O94822 1766 aa11.9□□□□□ -0.5
UPF3AP1-201ENST00000413731 CHD4Q14839 1912 aa11.9□□□□□ -0.5
UPF3AP1-201ENST00000413731 PAPPAQ13219 1627 aa11.89□□□□□ -0.51
UPF3AP1-201ENST00000413731 DDB1Q16531 1140 aa11.89□□□□□ -0.51
UPF3AP1-201ENST00000413731 PDGFDQ9GZP0 370 aaPredicted RBP11.89□□□□□ -0.51
UPF3AP1-201ENST00000413731 USP54Q70EL1 1684 aa11.89□□□□□ -0.51
UPF3AP1-201ENST00000413731 KAT6BQ8WYB5 2073 aa11.89□□□□□ -0.51
UPF3AP1-201ENST00000413731 BTAF1O14981 1849 aa11.88□□□□□ -0.51
UPF3AP1-201ENST00000413731 BCL9O00512 1426 aa11.88□□□□□ -0.51
UPF3AP1-201ENST00000413731 C11orf95C9JLR9 678 aaPredicted RBP11.88□□□□□ -0.51
UPF3AP1-201ENST00000413731 NLRP6P59044 892 aa11.88□□□□□ -0.51
UPF3AP1-201ENST00000413731 TOM1L2Q6ZVM7 507 aa11.88□□□□□ -0.51
UPF3AP1-201ENST00000413731 WDR17Q8IZU2 1322 aa11.87□□□□□ -0.51
UPF3AP1-201ENST00000413731 TNS2Q63HR2 1409 aa11.87□□□□□ -0.51
UPF3AP1-201ENST00000413731 ABCC6O95255 1503 aa11.87□□□□□ -0.51
UPF3AP1-201ENST00000413731 PLSCR1O15162 318 aa11.87□□□□□ -0.51
UPF3AP1-201ENST00000413731 MARCH10Q8NA82 808 aaPredicted RBP11.87□□□□□ -0.51
UPF3AP1-201ENST00000413731 CABP1Q9NZU7 370 aa11.87□□□□□ -0.51
UPF3AP1-201ENST00000413731 AXIN2Q9Y2T1 843 aa11.87□□□□□ -0.51
UPF3AP1-201ENST00000413731 BCL11BQ9C0K0 894 aaPredicted RBP11.86□□□□□ -0.51
UPF3AP1-201ENST00000413731 TUBGCP6Q96RT7 1819 aa11.86□□□□□ -0.51
UPF3AP1-201ENST00000413731 SOX12O15370 315 aa11.85□□□□□ -0.51
UPF3AP1-201ENST00000413731 ZBTB7AO95365 584 aa11.85□□□□□ -0.51
UPF3AP1-201ENST00000413731 PTGER2P43116 358 aa11.84□□□□□ -0.51
UPF3AP1-201ENST00000413731 DCAF8Q5TAQ9 597 aa11.84□□□□□ -0.51
UPF3AP1-201ENST00000413731 ARHGEF25Q86VW2 580 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms