RNA–Protein interactions for RNA: ENST00000412894.5

FAM3A-206, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 832 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-206ENST00000412894 ANKRD26Q9UPS8 1709 aa21.68■■□□□ 1.06
FAM3A-206ENST00000412894 ABCC6O95255 1503 aa21.67■■□□□ 1.06
FAM3A-206ENST00000412894 SPATA31A5Q5VU36 1347 aa21.66■■□□□ 1.06
FAM3A-206ENST00000412894 SPATA31A7Q8IWB4 1347 aa21.66■■□□□ 1.06
FAM3A-206ENST00000412894 PANK3Q9H999 370 aa21.66■■□□□ 1.06
FAM3A-206ENST00000412894 CCDC7Q96M83 1385 aa21.64■■□□□ 1.06
FAM3A-206ENST00000412894 CGNL1Q0VF96 1302 aa21.64■■□□□ 1.05
FAM3A-206ENST00000412894 LARP1Q6PKG0 1096 aaKnown RBP21.64■■□□□ 1.05
FAM3A-206ENST00000412894 AXIN2Q9Y2T1 843 aa21.64■■□□□ 1.05
FAM3A-206ENST00000412894 SPATA31A1Q5TZJ5 1347 aa21.62■■□□□ 1.05
FAM3A-206ENST00000412894 FAM98CQ17RN3 349 aaKnown RBP21.62■■□□□ 1.05
FAM3A-206ENST00000412894 THSD7AQ9UPZ6 1657 aa21.61■■□□□ 1.05
FAM3A-206ENST00000412894 A0A0G2JS52 829 aa21.61■■□□□ 1.05
FAM3A-206ENST00000412894 MYT1Q01538 1121 aa21.61■■□□□ 1.05
FAM3A-206ENST00000412894 USP35Q9P2H5 1018 aa21.61■■□□□ 1.05
FAM3A-206ENST00000412894 WASHC2AQ641Q2 1341 aa21.6■■□□□ 1.05
FAM3A-206ENST00000412894 MAP2P11137 1827 aaKnown RBP21.6■■□□□ 1.05
FAM3A-206ENST00000412894 WNK3Q9BYP7 1800 aa21.6■■□□□ 1.05
FAM3A-206ENST00000412894 FBLN1P23142 703 aa21.6■■□□□ 1.05
FAM3A-206ENST00000412894 CRB1P82279 1406 aa21.6■■□□□ 1.05
FAM3A-206ENST00000412894 SEPT12Q8IYM1 358 aa21.59■■□□□ 1.05
FAM3A-206ENST00000412894 WDR17Q8IZU2 1322 aa21.58■■□□□ 1.05
FAM3A-206ENST00000412894 ONECUT3O60422 494 aaPredicted RBP21.58■■□□□ 1.05
FAM3A-206ENST00000412894 MAP3K19Q56UN5 1328 aa21.57■■□□□ 1.04
FAM3A-206ENST00000412894 CSB-PGBD3P0DP91 1061 aa21.57■■□□□ 1.04
FAM3A-206ENST00000412894 TOM1L2Q6ZVM7 507 aa21.57■■□□□ 1.04
FAM3A-206ENST00000412894 FAM208AQ9UK61 1670 aaKnown RBP21.56■■□□□ 1.04
FAM3A-206ENST00000412894 PEAK1Q9H792 1746 aa21.56■■□□□ 1.04
FAM3A-206ENST00000412894 RRS1Q15050 365 aaKnown RBP21.56■■□□□ 1.04
FAM3A-206ENST00000412894 TCP11L2Q8N4U5 519 aa21.56■■□□□ 1.04
FAM3A-206ENST00000412894 KNSTRNQ9Y448 316 aa21.56■■□□□ 1.04
FAM3A-206ENST00000412894 BLMP54132 1417 aaPredicted RBP21.55■■□□□ 1.04
FAM3A-206ENST00000412894 ZEB1P37275 1124 aaPredicted RBP21.55■■□□□ 1.04
FAM3A-206ENST00000412894 AMPHP49418 695 aa21.55■■□□□ 1.04
FAM3A-206ENST00000412894 IP6K1Q92551 441 aa21.55■■□□□ 1.04
FAM3A-206ENST00000412894 RGPD2P0DJD1 1756 aa21.54■■□□□ 1.04
FAM3A-206ENST00000412894 RTL1A6NKG5 1358 aa21.54■■□□□ 1.04
FAM3A-206ENST00000412894 NSD2O96028 1365 aa21.54■■□□□ 1.04
FAM3A-206ENST00000412894 PARP4Q9UKK3 1724 aaKnown RBP21.54■■□□□ 1.04
FAM3A-206ENST00000412894 ERBB3P21860 1342 aa21.54■■□□□ 1.04
FAM3A-206ENST00000412894 HOXC9P31274 260 aa21.53■■□□□ 1.04
FAM3A-206ENST00000412894 BARGINQ6ZT62 677 aa21.53■■□□□ 1.04
FAM3A-206ENST00000412894 ANKRD24Q8TF21 1146 aa21.53■■□□□ 1.04
FAM3A-206ENST00000412894 THRAP3Q9Y2W1 955 aaKnown RBP21.53■■□□□ 1.04
FAM3A-206ENST00000412894 LTV1Q96GA3 475 aaPredicted RBP21.51■■□□□ 1.03
FAM3A-206ENST00000412894 TNNT2P45379 298 aaPredicted RBP21.5■■□□□ 1.03
FAM3A-206ENST00000412894 KRT27Q7Z3Y8 459 aa21.5■■□□□ 1.03
FAM3A-206ENST00000412894 CARD10Q9BWT7 1032 aa21.5■■□□□ 1.03
FAM3A-206ENST00000412894 LRRC37A3O60309 1634 aa21.49■■□□□ 1.03
FAM3A-206ENST00000412894 NLRP2Q9NX02 1062 aa21.49■■□□□ 1.03
FAM3A-206ENST00000412894 EMILIN1Q9Y6C2 1016 aa21.49■■□□□ 1.03
FAM3A-206ENST00000412894 FLT4P35916 1363 aa21.48■■□□□ 1.03
FAM3A-206ENST00000412894 UPF1Q92900 1129 aaKnown RBP eCLIP21.48■■□□□ 1.03
FAM3A-206ENST00000412894 KIF24Q5T7B8 1368 aa21.48■■□□□ 1.03
FAM3A-206ENST00000412894 EP400Q96L91 3159 aa21.47■■□□□ 1.03
FAM3A-206ENST00000412894 AMER1Q5JTC6 1135 aaPredicted RBP21.47■■□□□ 1.03
FAM3A-206ENST00000412894 MORC1Q86VD1 984 aa21.47■■□□□ 1.03
FAM3A-206ENST00000412894 PPM1GO15355 546 aaPredicted RBP21.46■■□□□ 1.03
FAM3A-206ENST00000412894 PER1O15534 1290 aaPredicted RBP21.46■■□□□ 1.03
FAM3A-206ENST00000412894 SMG6Q86US8 1419 aaKnown RBP21.46■■□□□ 1.03
FAM3A-206ENST00000412894 INSRP06213 1382 aa21.45■■□□□ 1.02
FAM3A-206ENST00000412894 HSP90AB2PQ58FF8 381 aa21.44■■□□□ 1.02
FAM3A-206ENST00000412894 DISP2A7MBM2 1401 aa21.44■■□□□ 1.02
FAM3A-206ENST00000412894 FAM182BQ5T319 152 aa21.43■■□□□ 1.02
FAM3A-206ENST00000412894 POLKQ9UBT6 870 aa21.43■■□□□ 1.02
FAM3A-206ENST00000412894 PDE3BQ13370 1112 aa21.42■■□□□ 1.02
FAM3A-206ENST00000412894 CC2D1BQ5T0F9 858 aaKnown RBP21.42■■□□□ 1.02
FAM3A-206ENST00000412894 CDCA7Q9BWT1 371 aaPredicted RBP21.42■■□□□ 1.02
FAM3A-206ENST00000412894 CNGB1Q14028 1251 aaPredicted RBP21.4■■□□□ 1.02
FAM3A-206ENST00000412894 DDB1Q16531 1140 aa21.4■■□□□ 1.02
FAM3A-206ENST00000412894 RGPD1P0DJD0 1748 aa21.39■■□□□ 1.01
FAM3A-206ENST00000412894 NPC1L1Q9UHC9 1359 aa21.38■■□□□ 1.01
FAM3A-206ENST00000412894 IL2RBP14784 551 aa21.38■■□□□ 1.01
FAM3A-206ENST00000412894 TNS2Q63HR2 1409 aa21.38■■□□□ 1.01
FAM3A-206ENST00000412894 NBPF6Q5VWK0 638 aa21.37■■□□□ 1.01
FAM3A-206ENST00000412894 NBPF4Q96M43 638 aa21.37■■□□□ 1.01
FAM3A-206ENST00000412894 SBF2Q86WG5 1849 aa21.36■■□□□ 1.01
FAM3A-206ENST00000412894 USHBP1Q8N6Y0 703 aa21.36■■□□□ 1.01
FAM3A-206ENST00000412894 TNS1Q9HBL0 1735 aaKnown RBP21.35■■□□□ 1.01
FAM3A-206ENST00000412894 EXOC5O00471 708 aa21.34■■□□□ 1.01
FAM3A-206ENST00000412894 FAM196AQ6ZSG2 479 aa21.34■■□□□ 1.01
FAM3A-206ENST00000412894 OVOS2A0A0G2JMS6 1433 aa21.34■■□□□ 1.01
FAM3A-206ENST00000412894 SHANK3Q9BYB0 1731 aa21.33■■□□□ 1.01
FAM3A-206ENST00000412894 CCDC125Q86Z20 511 aa21.33■■□□□ 1.01
FAM3A-206ENST00000412894 MEGF6O75095 1541 aa21.33■■□□□ 1
FAM3A-206ENST00000412894 KAT6BQ8WYB5 2073 aa21.32■■□□□ 1
FAM3A-206ENST00000412894 SF3B2Q13435 895 aaKnown RBP21.32■■□□□ 1
FAM3A-206ENST00000412894 EIF4A2Q14240 407 aaKnown RBP21.31■■□□□ 1
FAM3A-206ENST00000412894 MARCH10Q8NA82 808 aaPredicted RBP21.31■■□□□ 1
FAM3A-206ENST00000412894 MTHFSP49914 203 aa21.29■■□□□ 1
FAM3A-206ENST00000412894 RAPGEF4Q8WZA2 1011 aa21.29■■□□□ 1
FAM3A-206ENST00000412894 NCAPD2Q15021 1401 aa21.29■■□□□ 1
FAM3A-206ENST00000412894 TRIM37O94972 964 aa21.28■■□□□ 1
FAM3A-206ENST00000412894 DDX10Q13206 875 aaKnown RBP21.28■■□□□ 1
FAM3A-206ENST00000412894 EYA1Q99502 592 aa21.28■■□□□ 1
FAM3A-206ENST00000412894 PKD1L3Q7Z443 1732 aa21.27■■□□□ 1
FAM3A-206ENST00000412894 TATP17735 454 aaPredicted RBP21.27■■□□□ 1
FAM3A-206ENST00000412894 ZCRB1Q8TBF4 217 aaKnown RBP21.25■□□□□ 0.99
FAM3A-206ENST00000412894 NHSQ6T4R5 1651 aa21.24■□□□□ 0.99
FAM3A-206ENST00000412894 BCL9O00512 1426 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms