RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 DIAPH1O60610 1272 aaKnown RBP8.68□□□□□ -1.02
PTPN3-203ENST00000412145 SETSIPP0DME0 302 aa8.68□□□□□ -1.02
PTPN3-203ENST00000412145 TMCO3Q6UWJ1 677 aa8.68□□□□□ -1.02
PTPN3-203ENST00000412145 CGNQ9P2M7 1197 aaKnown RBP8.68□□□□□ -1.02
PTPN3-203ENST00000412145 DCAF8L1A6NGE4 600 aa8.68□□□□□ -1.02
PTPN3-203ENST00000412145 NEBLO76041 1014 aa8.68□□□□□ -1.02
PTPN3-203ENST00000412145 FOXD4L5Q5VV16 416 aaPredicted RBP8.68□□□□□ -1.02
PTPN3-203ENST00000412145 FOXD4L4Q8WXT5 416 aaPredicted RBP8.68□□□□□ -1.02
PTPN3-203ENST00000412145 DNAAF4Q8WXU2 420 aa8.68□□□□□ -1.02
PTPN3-203ENST00000412145 LRRC45Q96CN5 670 aa8.68□□□□□ -1.02
PTPN3-203ENST00000412145 USP47Q96K76 1375 aa8.68□□□□□ -1.02
PTPN3-203ENST00000412145 CTNNA3Q9UI47 895 aa8.68□□□□□ -1.02
PTPN3-203ENST00000412145 FAM114A2Q9NRY5 505 aa8.67□□□□□ -1.02
PTPN3-203ENST00000412145 PPP6R1Q9UPN7 881 aa8.67□□□□□ -1.02
PTPN3-203ENST00000412145 UBXN4Q92575 508 aa8.67□□□□□ -1.02
PTPN3-203ENST00000412145 FANCD2Q9BXW9 1451 aa8.67□□□□□ -1.02
PTPN3-203ENST00000412145 UBTFL1P0CB47 393 aaPredicted RBP8.67□□□□□ -1.02
PTPN3-203ENST00000412145 TRAK2O60296 914 aa8.67□□□□□ -1.02
PTPN3-203ENST00000412145 ARHGAP29Q52LW3 1261 aa8.67□□□□□ -1.02
PTPN3-203ENST00000412145 TNMDQ9H2S6 317 aa8.67□□□□□ -1.02
PTPN3-203ENST00000412145 STMN4Q9H169 189 aaPredicted RBP8.67□□□□□ -1.02
PTPN3-203ENST00000412145 FERP16591 822 aa8.66□□□□□ -1.02
PTPN3-203ENST00000412145 KIAA1328Q86T90 577 aa8.66□□□□□ -1.02
PTPN3-203ENST00000412145 FAM114A1Q8IWE2 563 aa8.66□□□□□ -1.02
PTPN3-203ENST00000412145 USH1CQ9Y6N9 552 aa8.66□□□□□ -1.02
PTPN3-203ENST00000412145 CTAGE5O15320 804 aa8.66□□□□□ -1.02
PTPN3-203ENST00000412145 SH3BGRP55822 239 aaPredicted RBP8.66□□□□□ -1.02
PTPN3-203ENST00000412145 FKBP5Q13451 457 aaPredicted RBP8.66□□□□□ -1.02
PTPN3-203ENST00000412145 DDX46Q7L014 1031 aaKnown RBP8.66□□□□□ -1.02
PTPN3-203ENST00000412145 CCDC175P0C221 793 aa8.66□□□□□ -1.02
PTPN3-203ENST00000412145 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.66□□□□□ -1.028e-7■■■□□ 18.1
PTPN3-203ENST00000412145 POLA1P09884 1462 aaPredicted RBP8.66□□□□□ -1.02
PTPN3-203ENST00000412145 PNISRQ8TF01 805 aaKnown RBP8.66□□□□□ -1.02
PTPN3-203ENST00000412145 ATAD2BQ9ULI0 1458 aa8.66□□□□□ -1.02
PTPN3-203ENST00000412145 TNIP1Q15025 636 aa8.66□□□□□ -1.02
PTPN3-203ENST00000412145 GTPBP4Q9BZE4 634 aaKnown RBP8.66□□□□□ -1.02
PTPN3-203ENST00000412145 CTR9Q6PD62 1173 aa8.66□□□□□ -1.02
PTPN3-203ENST00000412145 CYP46A1Q9Y6A2 500 aa8.66□□□□□ -1.02
PTPN3-203ENST00000412145 SPA17Q15506 151 aa8.65□□□□□ -1.02
PTPN3-203ENST00000412145 CCDC150Q8NCX0 1101 aa8.65□□□□□ -1.02
PTPN3-203ENST00000412145 IVLP07476 585 aa8.65□□□□□ -1.02
PTPN3-203ENST00000412145 SEPT6Q14141 434 aa8.65□□□□□ -1.02
PTPN3-203ENST00000412145 TAX1BP1Q86VP1 789 aa8.65□□□□□ -1.02
PTPN3-203ENST00000412145 PLVAPQ9BX97 442 aa8.65□□□□□ -1.02
PTPN3-203ENST00000412145 TTC12Q9H892 705 aaPredicted RBP8.65□□□□□ -1.02
PTPN3-203ENST00000412145 PLEKHH2Q8IVE3 1493 aa8.65□□□□□ -1.02
PTPN3-203ENST00000412145 RAPGEF2Q9Y4G8 1499 aa8.65□□□□□ -1.02
PTPN3-203ENST00000412145 CCDC30Q5VVM6 783 aa8.65□□□□□ -1.02
PTPN3-203ENST00000412145 RAB34Q9BZG1 259 aa8.65□□□□□ -1.02
PTPN3-203ENST00000412145 RAD21O60216 631 aa8.65□□□□□ -1.02
PTPN3-203ENST00000412145 KIF5CO60282 957 aa8.65□□□□□ -1.02
PTPN3-203ENST00000412145 GSDMDP57764 484 aa8.65□□□□□ -1.02
PTPN3-203ENST00000412145 PDE3AQ14432 1141 aa8.65□□□□□ -1.02
PTPN3-203ENST00000412145 FYCO1Q9BQS8 1478 aa8.65□□□□□ -1.02
PTPN3-203ENST00000412145 ANAPC15P60006 121 aa8.65□□□□□ -1.03
PTPN3-203ENST00000412145 SOGA3Q5TF21 947 aa8.65□□□□□ -1.03
PTPN3-203ENST00000412145 GAS2L2Q8NHY3 880 aa8.65□□□□□ -1.03
PTPN3-203ENST00000412145 KIF18AQ8NI77 898 aa8.65□□□□□ -1.03
PTPN3-203ENST00000412145 NSRP1Q9H0G5 558 aaKnown RBP8.65□□□□□ -1.03
PTPN3-203ENST00000412145 GOLIM4O00461 696 aa8.64□□□□□ -1.03
PTPN3-203ENST00000412145 NFKBIBQ15653 356 aa8.64□□□□□ -1.03
PTPN3-203ENST00000412145 FSD1Q9BTV5 496 aa8.64□□□□□ -1.03
PTPN3-203ENST00000412145 PRKCSHP14314 528 aaPredicted RBP8.64□□□□□ -1.03
PTPN3-203ENST00000412145 ALS2CR12Q96Q35 445 aa8.64□□□□□ -1.03
PTPN3-203ENST00000412145 DDX23Q9BUQ8 820 aaKnown RBP8.64□□□□□ -1.03
PTPN3-203ENST00000412145 DHX29Q7Z478 1369 aaKnown RBP8.64□□□□□ -1.03
PTPN3-203ENST00000412145 TTC14Q96N46 770 aa8.64□□□□□ -1.03
PTPN3-203ENST00000412145 PRKRIP1Q9H875 184 aaPredicted RBP8.64□□□□□ -1.03
PTPN3-203ENST00000412145 TUBBP07437 444 aa8.64□□□□□ -1.03
PTPN3-203ENST00000412145 CCT4P50991 539 aaKnown RBP8.64□□□□□ -1.03
PTPN3-203ENST00000412145 IFI16Q16666 785 aaKnown RBP8.64□□□□□ -1.03
PTPN3-203ENST00000412145 FKBP15Q5T1M5 1219 aa8.64□□□□□ -1.03
PTPN3-203ENST00000412145 CCDC102AQ96A19 550 aa8.64□□□□□ -1.03
PTPN3-203ENST00000412145 FHOD3Q2V2M9 1422 aa8.64□□□□□ -1.03
PTPN3-203ENST00000412145 CCDC172P0C7W6 258 aa8.64□□□□□ -1.03
PTPN3-203ENST00000412145 WASHC4Q2M389 1173 aa8.64□□□□□ -1.03
PTPN3-203ENST00000412145 PPP4R3AQ6IN85 833 aa8.64□□□□□ -1.03
PTPN3-203ENST00000412145 USO1O60763 962 aaKnown RBP8.64□□□□□ -1.03
PTPN3-203ENST00000412145 CETN1Q12798 172 aa8.64□□□□□ -1.03
PTPN3-203ENST00000412145 SFPQP23246 707 aaKnown RBP eCLIP8.63□□□□□ -1.03
PTPN3-203ENST00000412145 CCDC158Q5M9N0 1113 aa8.63□□□□□ -1.03
PTPN3-203ENST00000412145 DAAM2Q86T65 1068 aa8.63□□□□□ -1.03
PTPN3-203ENST00000412145 TSG101Q99816 390 aa8.63□□□□□ -1.03
PTPN3-203ENST00000412145 FMNL3Q8IVF7 1028 aa8.63□□□□□ -1.03
PTPN3-203ENST00000412145 TSNARE1Q96NA8 513 aa8.63□□□□□ -1.03
PTPN3-203ENST00000412145 KIF6Q6ZMV9 814 aa8.63□□□□□ -1.03
PTPN3-203ENST00000412145 PABPN1LA6NDY0 278 aaKnown RBP8.63□□□□□ -1.03
PTPN3-203ENST00000412145 CNGA1P29973 690 aa8.63□□□□□ -1.03
PTPN3-203ENST00000412145 WDR66Q8TBY9 1149 aa8.63□□□□□ -1.03
PTPN3-203ENST00000412145 ATF3P18847 181 aa8.62□□□□□ -1.03
PTPN3-203ENST00000412145 PSME1Q06323 249 aa8.62□□□□□ -1.03
PTPN3-203ENST00000412145 ZSCAN30Q86W11 494 aa8.62□□□□□ -1.03
PTPN3-203ENST00000412145 UPF3BQ9BZI7 483 aaKnown RBP8.62□□□□□ -1.03
PTPN3-203ENST00000412145 FBXO3Q9UK99 471 aa8.62□□□□□ -1.03
PTPN3-203ENST00000412145 MYO15BQ96JP2 1530 aa8.62□□□□□ -1.03
PTPN3-203ENST00000412145 PRPHP41219 470 aa8.62□□□□□ -1.03
PTPN3-203ENST00000412145 CRBNQ96SW2 442 aa8.62□□□□□ -1.03
PTPN3-203ENST00000412145 DHX57Q6P158 1386 aaKnown RBP8.62□□□□□ -1.03
PTPN3-203ENST00000412145 CCDC196A0A1B0GTZ2 297 aa8.62□□□□□ -1.03
PTPN3-203ENST00000412145 MYOM3Q5VTT5 1437 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms