RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 CNGB1Q14028 1251 aaPredicted RBP16.51■□□□□ 0.23
NEDD1-202ENST00000411739 AATKQ6ZMQ8 1374 aa16.5■□□□□ 0.23
NEDD1-202ENST00000411739 SPATA31A5Q5VU36 1347 aa16.5■□□□□ 0.23
NEDD1-202ENST00000411739 SPATA31A7Q8IWB4 1347 aa16.5■□□□□ 0.23
NEDD1-202ENST00000411739 CCDC7Q96M83 1385 aa16.5■□□□□ 0.23
NEDD1-202ENST00000411739 TNNT2P45379 298 aaPredicted RBP16.5■□□□□ 0.23
NEDD1-202ENST00000411739 LMO7Q8WWI1 1683 aa16.49■□□□□ 0.23
NEDD1-202ENST00000411739 SEPT12Q8IYM1 358 aa16.49■□□□□ 0.23
NEDD1-202ENST00000411739 CGNL1Q0VF96 1302 aa16.48■□□□□ 0.23
NEDD1-202ENST00000411739 COL5A2P05997 1499 aaPredicted RBP16.48■□□□□ 0.23
NEDD1-202ENST00000411739 CSB-PGBD3P0DP91 1061 aa16.48■□□□□ 0.23
NEDD1-202ENST00000411739 LTV1Q96GA3 475 aaPredicted RBP16.48■□□□□ 0.23
NEDD1-202ENST00000411739 COL18A1P39060 1754 aa16.48■□□□□ 0.23
NEDD1-202ENST00000411739 RGPD5Q99666 1765 aa16.48■□□□□ 0.23
NEDD1-202ENST00000411739 MAP3K19Q56UN5 1328 aa16.48■□□□□ 0.23
NEDD1-202ENST00000411739 SPATA31A1Q5TZJ5 1347 aa16.48■□□□□ 0.23
NEDD1-202ENST00000411739 USP54Q70EL1 1684 aa16.47■□□□□ 0.23
NEDD1-202ENST00000411739 TOM1L2Q6ZVM7 507 aa16.47■□□□□ 0.23
NEDD1-202ENST00000411739 KIF20BQ96Q89 1820 aa16.46■□□□□ 0.23
NEDD1-202ENST00000411739 AMPHP49418 695 aa16.46■□□□□ 0.23
NEDD1-202ENST00000411739 CDK12Q9NYV4 1490 aaPredicted RBP16.46■□□□□ 0.23
NEDD1-202ENST00000411739 KNSTRNQ9Y448 316 aa16.45■□□□□ 0.22
NEDD1-202ENST00000411739 LTN1O94822 1766 aa16.45■□□□□ 0.22
NEDD1-202ENST00000411739 PPM1GO15355 546 aaPredicted RBP16.44■□□□□ 0.22
NEDD1-202ENST00000411739 FAM182BQ5T319 152 aa16.44■□□□□ 0.22
NEDD1-202ENST00000411739 ONECUT3O60422 494 aaPredicted RBP16.44■□□□□ 0.22
NEDD1-202ENST00000411739 EMILIN1Q9Y6C2 1016 aa16.44■□□□□ 0.22
NEDD1-202ENST00000411739 TCP11L2Q8N4U5 519 aa16.43■□□□□ 0.22
NEDD1-202ENST00000411739 ANKRD24Q8TF21 1146 aa16.43■□□□□ 0.22
NEDD1-202ENST00000411739 IP6K1Q92551 441 aa16.43■□□□□ 0.22
NEDD1-202ENST00000411739 WDR17Q8IZU2 1322 aa16.43■□□□□ 0.22
NEDD1-202ENST00000411739 HOXC9P31274 260 aa16.43■□□□□ 0.22
NEDD1-202ENST00000411739 NLRP2Q9NX02 1062 aa16.42■□□□□ 0.22
NEDD1-202ENST00000411739 CRB1P82279 1406 aa16.42■□□□□ 0.22
NEDD1-202ENST00000411739 PER1O15534 1290 aaPredicted RBP16.41■□□□□ 0.22
NEDD1-202ENST00000411739 ZEB1P37275 1124 aaPredicted RBP16.41■□□□□ 0.22
NEDD1-202ENST00000411739 HSP90AB2PQ58FF8 381 aa16.41■□□□□ 0.22
NEDD1-202ENST00000411739 CC2D1BQ5T0F9 858 aaKnown RBP16.41■□□□□ 0.22
NEDD1-202ENST00000411739 ERBB3P21860 1342 aa16.41■□□□□ 0.22
NEDD1-202ENST00000411739 AMER1Q5JTC6 1135 aaPredicted RBP16.4■□□□□ 0.22
NEDD1-202ENST00000411739 MORC1Q86VD1 984 aa16.4■□□□□ 0.22
NEDD1-202ENST00000411739 BRWD3Q6RI45 1802 aa16.4■□□□□ 0.22
NEDD1-202ENST00000411739 KRT27Q7Z3Y8 459 aa16.4■□□□□ 0.22
NEDD1-202ENST00000411739 UPF1Q92900 1129 aaKnown RBP eCLIP16.39■□□□□ 0.21
NEDD1-202ENST00000411739 BARGINQ6ZT62 677 aa16.38■□□□□ 0.21
NEDD1-202ENST00000411739 CARD10Q9BWT7 1032 aa16.38■□□□□ 0.21
NEDD1-202ENST00000411739 POLKQ9UBT6 870 aa16.38■□□□□ 0.21
NEDD1-202ENST00000411739 EP400Q96L91 3159 aa16.38■□□□□ 0.21
NEDD1-202ENST00000411739 PEAK1Q9H792 1746 aa16.37■□□□□ 0.21
NEDD1-202ENST00000411739 USHBP1Q8N6Y0 703 aa16.37■□□□□ 0.21
NEDD1-202ENST00000411739 THRAP3Q9Y2W1 955 aaKnown RBP16.36■□□□□ 0.21
NEDD1-202ENST00000411739 BLMP54132 1417 aaPredicted RBP16.35■□□□□ 0.21
NEDD1-202ENST00000411739 THSD7AQ9UPZ6 1657 aa16.35■□□□□ 0.21
NEDD1-202ENST00000411739 PDE3BQ13370 1112 aa16.35■□□□□ 0.21
NEDD1-202ENST00000411739 MAP2P11137 1827 aaKnown RBP16.34■□□□□ 0.21
NEDD1-202ENST00000411739 ABCC6O95255 1503 aa16.34■□□□□ 0.21
NEDD1-202ENST00000411739 NBPF6Q5VWK0 638 aa16.34■□□□□ 0.21
NEDD1-202ENST00000411739 NBPF4Q96M43 638 aa16.34■□□□□ 0.21
NEDD1-202ENST00000411739 FLT4P35916 1363 aa16.34■□□□□ 0.21
NEDD1-202ENST00000411739 NSD2O96028 1365 aa16.33■□□□□ 0.21
NEDD1-202ENST00000411739 RTL1A6NKG5 1358 aa16.33■□□□□ 0.2
NEDD1-202ENST00000411739 ANKRD26Q9UPS8 1709 aa16.33■□□□□ 0.2
NEDD1-202ENST00000411739 DDX10Q13206 875 aaKnown RBP16.33■□□□□ 0.2
NEDD1-202ENST00000411739 RGPD2P0DJD1 1756 aa16.32■□□□□ 0.2
NEDD1-202ENST00000411739 DDB1Q16531 1140 aa16.32■□□□□ 0.2
NEDD1-202ENST00000411739 INSRP06213 1382 aa16.32■□□□□ 0.2
NEDD1-202ENST00000411739 IL2RBP14784 551 aa16.3■□□□□ 0.2
NEDD1-202ENST00000411739 DISP2A7MBM2 1401 aa16.29■□□□□ 0.2
NEDD1-202ENST00000411739 EXOC5O00471 708 aa16.29■□□□□ 0.2
NEDD1-202ENST00000411739 EIF4A2Q14240 407 aaKnown RBP16.28■□□□□ 0.2
NEDD1-202ENST00000411739 MARCH10Q8NA82 808 aaPredicted RBP16.28■□□□□ 0.2
NEDD1-202ENST00000411739 SMG6Q86US8 1419 aaKnown RBP16.28■□□□□ 0.2
NEDD1-202ENST00000411739 MTHFSP49914 203 aa16.28■□□□□ 0.2
NEDD1-202ENST00000411739 KIF24Q5T7B8 1368 aa16.27■□□□□ 0.2
NEDD1-202ENST00000411739 EYA1Q99502 592 aa16.27■□□□□ 0.2
NEDD1-202ENST00000411739 TRIM37O94972 964 aa16.27■□□□□ 0.19
NEDD1-202ENST00000411739 CDCA7Q9BWT1 371 aaPredicted RBP16.27■□□□□ 0.19
NEDD1-202ENST00000411739 LRRC37A3O60309 1634 aa16.26■□□□□ 0.19
NEDD1-202ENST00000411739 DDX54Q8TDD1 881 aaKnown RBP16.26■□□□□ 0.19
NEDD1-202ENST00000411739 PARP4Q9UKK3 1724 aaKnown RBP16.26■□□□□ 0.19
NEDD1-202ENST00000411739 DEFB132Q7Z7B7 95 aa16.26■□□□□ 0.19
NEDD1-202ENST00000411739 FAM196AQ6ZSG2 479 aa16.25■□□□□ 0.19
NEDD1-202ENST00000411739 WNK3Q9BYP7 1800 aa16.25■□□□□ 0.19
NEDD1-202ENST00000411739 PTF1AQ7RTS3 328 aa16.25■□□□□ 0.19
NEDD1-202ENST00000411739 MEGF6O75095 1541 aa16.24■□□□□ 0.19
NEDD1-202ENST00000411739 FAM208AQ9UK61 1670 aaKnown RBP16.24■□□□□ 0.19
NEDD1-202ENST00000411739 NPC1L1Q9UHC9 1359 aa16.23■□□□□ 0.19
NEDD1-202ENST00000411739 RAPGEF4Q8WZA2 1011 aa16.23■□□□□ 0.19
NEDD1-202ENST00000411739 SF3B2Q13435 895 aaKnown RBP16.22■□□□□ 0.19
NEDD1-202ENST00000411739 ACSBG1Q96GR2 724 aa16.22■□□□□ 0.19
NEDD1-202ENST00000411739 ZCRB1Q8TBF4 217 aaKnown RBP16.22■□□□□ 0.19
NEDD1-202ENST00000411739 TATP17735 454 aaPredicted RBP16.21■□□□□ 0.19
NEDD1-202ENST00000411739 TNS2Q63HR2 1409 aa16.21■□□□□ 0.19
NEDD1-202ENST00000411739 AEBP1Q8IUX7 1158 aa16.21■□□□□ 0.18
NEDD1-202ENST00000411739 IL13P35225 146 aa16.2■□□□□ 0.18
NEDD1-202ENST00000411739 OVOS2A0A0G2JMS6 1433 aa16.2■□□□□ 0.18
NEDD1-202ENST00000411739 KCNQ2O43526 872 aa16.2■□□□□ 0.18
NEDD1-202ENST00000411739 EN1Q05925 392 aaPredicted RBP16.2■□□□□ 0.18
NEDD1-202ENST00000411739 CCDC125Q86Z20 511 aa16.2■□□□□ 0.18
NEDD1-202ENST00000411739 ZNF316A6NFI3 1004 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms