RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 C8orf37Q96NL8 207 aa19.05■□□□□ 0.64
CHRNA1-204ENST00000409323 HOXC9P31274 260 aa19.04■□□□□ 0.64
CHRNA1-204ENST00000409323 COL18A1P39060 1754 aa19.03■□□□□ 0.64
CHRNA1-204ENST00000409323 CPDO75976 1380 aa19.02■□□□□ 0.64
CHRNA1-204ENST00000409323 PLCH1Q4KWH8 1693 aa19.01■□□□□ 0.63
CHRNA1-204ENST00000409323 FLT4P35916 1363 aa19.01■□□□□ 0.63
CHRNA1-204ENST00000409323 CAMTA1Q9Y6Y1 1673 aa19■□□□□ 0.63
CHRNA1-204ENST00000409323 IP6K1Q92551 441 aa19■□□□□ 0.63
CHRNA1-204ENST00000409323 NGLY1Q96IV0 654 aa19■□□□□ 0.63
CHRNA1-204ENST00000409323 STRN4Q9NRL3 753 aa19■□□□□ 0.63
CHRNA1-204ENST00000409323 BTG4Q9NY30 223 aa19■□□□□ 0.63
CHRNA1-204ENST00000409323 SMG6Q86US8 1419 aaKnown RBP19■□□□□ 0.63
CHRNA1-204ENST00000409323 LMO7Q8WWI1 1683 aa19■□□□□ 0.63
CHRNA1-204ENST00000409323 COL14A1Q05707 1796 aaKnown RBP18.99■□□□□ 0.63
CHRNA1-204ENST00000409323 CDK12Q9NYV4 1490 aaPredicted RBP18.98■□□□□ 0.63
CHRNA1-204ENST00000409323 RGPD2P0DJD1 1756 aa18.98■□□□□ 0.63
CHRNA1-204ENST00000409323 ANKRD24Q8TF21 1146 aa18.97■□□□□ 0.63
CHRNA1-204ENST00000409323 MRS2Q9HD23 443 aa18.97■□□□□ 0.63
CHRNA1-204ENST00000409323 COL3A1P02461 1466 aaPredicted RBP18.96■□□□□ 0.63
CHRNA1-204ENST00000409323 RTL1A6NKG5 1358 aa18.96■□□□□ 0.63
CHRNA1-204ENST00000409323 CSB-PGBD3P0DP91 1061 aa18.96■□□□□ 0.63
CHRNA1-204ENST00000409323 EIF4A2Q14240 407 aaKnown RBP18.96■□□□□ 0.63
CHRNA1-204ENST00000409323 CFAP53Q96M91 514 aa18.95■□□□□ 0.62
CHRNA1-204ENST00000409323 INSRP06213 1382 aa18.95■□□□□ 0.62
CHRNA1-204ENST00000409323 EVA1CP58658 441 aa18.94■□□□□ 0.62
CHRNA1-204ENST00000409323 USHBP1Q8N6Y0 703 aa18.94■□□□□ 0.62
CHRNA1-204ENST00000409323 COL5A2P05997 1499 aaPredicted RBP18.94■□□□□ 0.62
CHRNA1-204ENST00000409323 AFF2P51816 1311 aa18.94■□□□□ 0.62
CHRNA1-204ENST00000409323 U2SURPO15042 1029 aaKnown RBP18.93■□□□□ 0.62
CHRNA1-204ENST00000409323 DIAPH1O60610 1272 aaKnown RBP18.93■□□□□ 0.62
CHRNA1-204ENST00000409323 LARP1Q6PKG0 1096 aaKnown RBP18.93■□□□□ 0.62
CHRNA1-204ENST00000409323 BLMP54132 1417 aaPredicted RBP18.93■□□□□ 0.62
CHRNA1-204ENST00000409323 NRAPQ86VF7 1730 aa18.93■□□□□ 0.62
CHRNA1-204ENST00000409323 ERBB3P21860 1342 aa18.93■□□□□ 0.62
CHRNA1-204ENST00000409323 USP35Q9P2H5 1018 aa18.93■□□□□ 0.62
CHRNA1-204ENST00000409323 SLIT2O94813 1529 aa18.92■□□□□ 0.62
CHRNA1-204ENST00000409323 IL13P35225 146 aa18.92■□□□□ 0.62
CHRNA1-204ENST00000409323 KIF24Q5T7B8 1368 aa18.92■□□□□ 0.62
CHRNA1-204ENST00000409323 NLRP2Q9NX02 1062 aa18.91■□□□□ 0.62
CHRNA1-204ENST00000409323 USP21Q9UK80 565 aa18.91■□□□□ 0.62
CHRNA1-204ENST00000409323 ABCC6O95255 1503 aa18.9■□□□□ 0.62
CHRNA1-204ENST00000409323 NBPF6Q5VWK0 638 aa18.9■□□□□ 0.62
CHRNA1-204ENST00000409323 TOM1L2Q6ZVM7 507 aa18.9■□□□□ 0.62
CHRNA1-204ENST00000409323 NBPF4Q96M43 638 aa18.9■□□□□ 0.62
CHRNA1-204ENST00000409323 CCDC9Q9Y3X0 531 aaKnown RBP18.9■□□□□ 0.62
CHRNA1-204ENST00000409323 NWD2Q9ULI1 1742 aa18.9■□□□□ 0.62
CHRNA1-204ENST00000409323 BCL9LQ86UU0 1499 aa18.9■□□□□ 0.62
CHRNA1-204ENST00000409323 HMOX1P09601 288 aa18.89■□□□□ 0.62
CHRNA1-204ENST00000409323 EYA1Q99502 592 aa18.89■□□□□ 0.62
CHRNA1-204ENST00000409323 AEBP1Q8IUX7 1158 aa18.89■□□□□ 0.61
CHRNA1-204ENST00000409323 UNC5CLQ8IV45 518 aa18.89■□□□□ 0.61
CHRNA1-204ENST00000409323 FNBP4Q8N3X1 1017 aaPredicted RBP18.89■□□□□ 0.61
CHRNA1-204ENST00000409323 WDR17Q8IZU2 1322 aa18.88■□□□□ 0.61
CHRNA1-204ENST00000409323 SENP3-EIF4A1A0A087X0R7 540 aa18.88■□□□□ 0.61
CHRNA1-204ENST00000409323 U2AF1L5P0DN76 240 aaPredicted RBP18.88■□□□□ 0.61
CHRNA1-204ENST00000409323 U2AF1Q01081 240 aaKnown RBP eCLIP18.88■□□□□ 0.61
CHRNA1-204ENST00000409323 FAM9BQ8IZU0 186 aa18.88■□□□□ 0.61
CHRNA1-204ENST00000409323 CCER2I3L3R5 266 aa18.86■□□□□ 0.61
CHRNA1-204ENST00000409323 RGPD1P0DJD0 1748 aa18.86■□□□□ 0.61
CHRNA1-204ENST00000409323 SULT6B1Q6IMI4 303 aa18.85■□□□□ 0.61
CHRNA1-204ENST00000409323 WDR43Q15061 677 aaKnown RBP eCLIP18.85■□□□□ 0.61
CHRNA1-204ENST00000409323 NUDCQ9Y266 331 aa18.85■□□□□ 0.61
CHRNA1-204ENST00000409323 CRB1P82279 1406 aa18.84■□□□□ 0.61
CHRNA1-204ENST00000409323 PNISRQ8TF01 805 aaKnown RBP18.84■□□□□ 0.61
CHRNA1-204ENST00000409323 PHF23Q9BUL5 403 aaPredicted RBP18.84■□□□□ 0.61
CHRNA1-204ENST00000409323 ADAMTS8Q9UP79 889 aa18.84■□□□□ 0.61
CHRNA1-204ENST00000409323 FAM208AQ9UK61 1670 aaKnown RBP18.84■□□□□ 0.61
CHRNA1-204ENST00000409323 IGSF1Q8N6C5 1336 aa18.84■□□□□ 0.61
CHRNA1-204ENST00000409323 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.83■□□□□ 0.6
CHRNA1-204ENST00000409323 CCDC146Q8IYE0 955 aa18.83■□□□□ 0.6
CHRNA1-204ENST00000409323 RGS17Q9UGC6 210 aaPredicted RBP18.82■□□□□ 0.6
CHRNA1-204ENST00000409323 QTRT2Q9H974 415 aaKnown RBP18.81■□□□□ 0.6
CHRNA1-204ENST00000409323 VPS72Q15906 364 aa18.81■□□□□ 0.6
CHRNA1-204ENST00000409323 CARD10Q9BWT7 1032 aa18.81■□□□□ 0.6
CHRNA1-204ENST00000409323 SPATA31A1Q5TZJ5 1347 aa18.8■□□□□ 0.6
CHRNA1-204ENST00000409323 SPATA31A5Q5VU36 1347 aa18.8■□□□□ 0.6
CHRNA1-204ENST00000409323 SPATA31A7Q8IWB4 1347 aa18.8■□□□□ 0.6
CHRNA1-204ENST00000409323 PRKAR2BP31323 418 aa18.79■□□□□ 0.6
CHRNA1-204ENST00000409323 TRPC5Q9UL62 973 aaPredicted RBP18.79■□□□□ 0.6
CHRNA1-204ENST00000409323 ATRNO75882 1429 aa18.79■□□□□ 0.6
CHRNA1-204ENST00000409323 GLI3P10071 1580 aa18.78■□□□□ 0.6
CHRNA1-204ENST00000409323 MEGF6O75095 1541 aa18.78■□□□□ 0.6
CHRNA1-204ENST00000409323 FAM98CQ17RN3 349 aaKnown RBP18.78■□□□□ 0.6
CHRNA1-204ENST00000409323 RSPH6AQ9H0K4 717 aa18.78■□□□□ 0.6
CHRNA1-204ENST00000409323 TCP11L2Q8N4U5 519 aa18.77■□□□□ 0.6
CHRNA1-204ENST00000409323 GJD4Q96KN9 370 aaPredicted RBP18.77■□□□□ 0.6
CHRNA1-204ENST00000409323 A0A0G2JS52 829 aa18.76■□□□□ 0.59
CHRNA1-204ENST00000409323 MYT1Q01538 1121 aa18.76■□□□□ 0.59
CHRNA1-204ENST00000409323 ZNF772Q68DY9 489 aaPredicted RBP18.76■□□□□ 0.59
CHRNA1-204ENST00000409323 POTEAQ6S8J7 498 aa18.76■□□□□ 0.59
CHRNA1-204ENST00000409323 PHACTR3Q96KR7 559 aa18.76■□□□□ 0.59
CHRNA1-204ENST00000409323 WNK3Q9BYP7 1800 aa18.75■□□□□ 0.59
CHRNA1-204ENST00000409323 NCAPD2Q15021 1401 aa18.75■□□□□ 0.59
CHRNA1-204ENST00000409323 KDRP35968 1356 aa18.75■□□□□ 0.59
CHRNA1-204ENST00000409323 RAPGEF4Q8WZA2 1011 aa18.75■□□□□ 0.59
CHRNA1-204ENST00000409323 IL2RBP14784 551 aa18.74■□□□□ 0.59
CHRNA1-204ENST00000409323 FCHSD2O94868 740 aa18.73■□□□□ 0.59
CHRNA1-204ENST00000409323 TATP17735 454 aaPredicted RBP18.72■□□□□ 0.59
CHRNA1-204ENST00000409323 PLEKHF1Q96S99 279 aa18.72■□□□□ 0.59
CHRNA1-204ENST00000409323 RRP7AQ9Y3A4 280 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms