RNA–Protein interactions for RNA: ENST00000402458.1

SNU13-204, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 3 BASIC

Gene SNU13, Length 462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-204ENST00000402458 ZNF772Q68DY9 489 aaPredicted RBP18.42■□□□□ 0.54
SNU13-204ENST00000402458 POLKQ9UBT6 870 aa18.42■□□□□ 0.54
SNU13-204ENST00000402458 SLIT2O94813 1529 aa18.42■□□□□ 0.54
SNU13-204ENST00000402458 COL18A1P39060 1754 aa18.42■□□□□ 0.54
SNU13-204ENST00000402458 FLT4P35916 1363 aa18.42■□□□□ 0.54
SNU13-204ENST00000402458 LMO7Q8WWI1 1683 aa18.41■□□□□ 0.54
SNU13-204ENST00000402458 HOXC9P31274 260 aa18.41■□□□□ 0.54
SNU13-204ENST00000402458 UNC5CLQ8IV45 518 aa18.41■□□□□ 0.54
SNU13-204ENST00000402458 EMILIN1Q9Y6C2 1016 aa18.41■□□□□ 0.54
SNU13-204ENST00000402458 PARD3Q8TEW0 1356 aa18.41■□□□□ 0.54
SNU13-204ENST00000402458 BLMP54132 1417 aaPredicted RBP18.4■□□□□ 0.54
SNU13-204ENST00000402458 RGPD5Q99666 1765 aa18.4■□□□□ 0.54
SNU13-204ENST00000402458 ANP32CO43423 234 aa18.4■□□□□ 0.54
SNU13-204ENST00000402458 STRN4Q9NRL3 753 aa18.4■□□□□ 0.54
SNU13-204ENST00000402458 CAMTA1Q9Y6Y1 1673 aa18.4■□□□□ 0.54
SNU13-204ENST00000402458 CSB-PGBD3P0DP91 1061 aa18.39■□□□□ 0.53
SNU13-204ENST00000402458 AXIN2Q9Y2T1 843 aa18.39■□□□□ 0.53
SNU13-204ENST00000402458 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.39■□□□□ 0.53
SNU13-204ENST00000402458 SMG6Q86US8 1419 aaKnown RBP18.39■□□□□ 0.53
SNU13-204ENST00000402458 MTHFSP49914 203 aa18.38■□□□□ 0.53
SNU13-204ENST00000402458 TRPC5Q9UL62 973 aaPredicted RBP18.38■□□□□ 0.53
SNU13-204ENST00000402458 NRAPQ86VF7 1730 aa18.37■□□□□ 0.53
SNU13-204ENST00000402458 PEAK1Q9H792 1746 aa18.37■□□□□ 0.53
SNU13-204ENST00000402458 PPP2R1AP30153 589 aa18.37■□□□□ 0.53
SNU13-204ENST00000402458 ANKRD24Q8TF21 1146 aa18.37■□□□□ 0.53
SNU13-204ENST00000402458 PRKRIP1Q9H875 184 aaPredicted RBP18.37■□□□□ 0.53
SNU13-204ENST00000402458 CCDC9Q9Y3X0 531 aaKnown RBP18.37■□□□□ 0.53
SNU13-204ENST00000402458 INSRP06213 1382 aa18.37■□□□□ 0.53
SNU13-204ENST00000402458 COL5A2P05997 1499 aaPredicted RBP18.37■□□□□ 0.53
SNU13-204ENST00000402458 BCL9LQ86UU0 1499 aa18.37■□□□□ 0.53
SNU13-204ENST00000402458 HSP90AB2PQ58FF8 381 aa18.36■□□□□ 0.53
SNU13-204ENST00000402458 LTV1Q96GA3 475 aaPredicted RBP18.36■□□□□ 0.53
SNU13-204ENST00000402458 CFAP53Q96M91 514 aa18.36■□□□□ 0.53
SNU13-204ENST00000402458 CDK12Q9NYV4 1490 aaPredicted RBP18.36■□□□□ 0.53
SNU13-204ENST00000402458 MYBBP1AQ9BQG0 1328 aaKnown RBP18.35■□□□□ 0.53
SNU13-204ENST00000402458 QTRT2Q9H974 415 aaKnown RBP18.35■□□□□ 0.53
SNU13-204ENST00000402458 ERBB3P21860 1342 aa18.34■□□□□ 0.53
SNU13-204ENST00000402458 WDR17Q8IZU2 1322 aa18.34■□□□□ 0.53
SNU13-204ENST00000402458 VPS72Q15906 364 aa18.34■□□□□ 0.53
SNU13-204ENST00000402458 TOM1L2Q6ZVM7 507 aa18.34■□□□□ 0.53
SNU13-204ENST00000402458 FAM208AQ9UK61 1670 aaKnown RBP18.34■□□□□ 0.53
SNU13-204ENST00000402458 DIEXFQ68CQ4 756 aaKnown RBP18.33■□□□□ 0.52
SNU13-204ENST00000402458 LARP1Q6PKG0 1096 aaKnown RBP18.33■□□□□ 0.52
SNU13-204ENST00000402458 ATRNO75882 1429 aa18.32■□□□□ 0.52
SNU13-204ENST00000402458 CRB1P82279 1406 aa18.32■□□□□ 0.52
SNU13-204ENST00000402458 NLRP2Q9NX02 1062 aa18.32■□□□□ 0.52
SNU13-204ENST00000402458 GJD4Q96KN9 370 aaPredicted RBP18.3■□□□□ 0.52
SNU13-204ENST00000402458 RGS17Q9UGC6 210 aaPredicted RBP18.3■□□□□ 0.52
SNU13-204ENST00000402458 SPATA31A5Q5VU36 1347 aa18.29■□□□□ 0.52
SNU13-204ENST00000402458 SPATA31A7Q8IWB4 1347 aa18.29■□□□□ 0.52
SNU13-204ENST00000402458 DIAPH1O60610 1272 aaKnown RBP18.29■□□□□ 0.52
SNU13-204ENST00000402458 EIF4A2Q14240 407 aaKnown RBP18.29■□□□□ 0.52
SNU13-204ENST00000402458 CARD10Q9BWT7 1032 aa18.29■□□□□ 0.52
SNU13-204ENST00000402458 USP35Q9P2H5 1018 aa18.29■□□□□ 0.52
SNU13-204ENST00000402458 SPATA31A1Q5TZJ5 1347 aa18.28■□□□□ 0.52
SNU13-204ENST00000402458 RXRBP28702 533 aa18.28■□□□□ 0.52
SNU13-204ENST00000402458 RBM6P78332 1123 aaKnown RBP18.28■□□□□ 0.52
SNU13-204ENST00000402458 THRAP3Q9Y2W1 955 aaKnown RBP18.28■□□□□ 0.52
SNU13-204ENST00000402458 TCP11L2Q8N4U5 519 aa18.27■□□□□ 0.52
SNU13-204ENST00000402458 NUDCQ9Y266 331 aa18.27■□□□□ 0.52
SNU13-204ENST00000402458 POTEAQ6S8J7 498 aa18.26■□□□□ 0.51
SNU13-204ENST00000402458 RGPD2P0DJD1 1756 aa18.26■□□□□ 0.51
SNU13-204ENST00000402458 IL13P35225 146 aa18.25■□□□□ 0.51
SNU13-204ENST00000402458 A0A0G2JS52 829 aa18.24■□□□□ 0.51
SNU13-204ENST00000402458 MYT1Q01538 1121 aa18.24■□□□□ 0.51
SNU13-204ENST00000402458 NBPF6Q5VWK0 638 aa18.24■□□□□ 0.51
SNU13-204ENST00000402458 NBPF4Q96M43 638 aa18.24■□□□□ 0.51
SNU13-204ENST00000402458 EYA1Q99502 592 aa18.24■□□□□ 0.51
SNU13-204ENST00000402458 GLI3P10071 1580 aa18.23■□□□□ 0.51
SNU13-204ENST00000402458 COL3A1P02461 1466 aaPredicted RBP18.23■□□□□ 0.51
SNU13-204ENST00000402458 U2SURPO15042 1029 aaKnown RBP18.23■□□□□ 0.51
SNU13-204ENST00000402458 FAM98CQ17RN3 349 aaKnown RBP18.23■□□□□ 0.51
SNU13-204ENST00000402458 BARGINQ6ZT62 677 aa18.23■□□□□ 0.51
SNU13-204ENST00000402458 CDCA7Q9BWT1 371 aaPredicted RBP18.23■□□□□ 0.51
SNU13-204ENST00000402458 USHBP1Q8N6Y0 703 aa18.22■□□□□ 0.51
SNU13-204ENST00000402458 IGSF1Q8N6C5 1336 aa18.22■□□□□ 0.51
SNU13-204ENST00000402458 RAPGEF4Q8WZA2 1011 aa18.21■□□□□ 0.51
SNU13-204ENST00000402458 IL2RBP14784 551 aa18.2■□□□□ 0.5
SNU13-204ENST00000402458 WNK3Q9BYP7 1800 aa18.2■□□□□ 0.5
SNU13-204ENST00000402458 RGPD1P0DJD0 1748 aa18.19■□□□□ 0.5
SNU13-204ENST00000402458 TATP17735 454 aaPredicted RBP18.19■□□□□ 0.5
SNU13-204ENST00000402458 SULT6B1Q6IMI4 303 aa18.19■□□□□ 0.5
SNU13-204ENST00000402458 ONECUT3O60422 494 aaPredicted RBP18.18■□□□□ 0.5
SNU13-204ENST00000402458 U2AF1L5P0DN76 240 aaPredicted RBP18.18■□□□□ 0.5
SNU13-204ENST00000402458 U2AF1Q01081 240 aaKnown RBP eCLIP18.18■□□□□ 0.5
SNU13-204ENST00000402458 WDR43Q15061 677 aaKnown RBP eCLIP18.18■□□□□ 0.5
SNU13-204ENST00000402458 NCAPD2Q15021 1401 aa18.17■□□□□ 0.5
SNU13-204ENST00000402458 MRS2Q9HD23 443 aa18.17■□□□□ 0.5
SNU13-204ENST00000402458 PARP4Q9UKK3 1724 aaKnown RBP18.17■□□□□ 0.5
SNU13-204ENST00000402458 HMOX1P09601 288 aa18.16■□□□□ 0.5
SNU13-204ENST00000402458 SEPT12Q8IYM1 358 aa18.16■□□□□ 0.5
SNU13-204ENST00000402458 EXOC5O00471 708 aa18.15■□□□□ 0.5
SNU13-204ENST00000402458 DDB1Q16531 1140 aa18.15■□□□□ 0.5
SNU13-204ENST00000402458 PNNQ9H307 717 aaKnown RBP18.15■□□□□ 0.5
SNU13-204ENST00000402458 THSD7AQ9UPZ6 1657 aa18.15■□□□□ 0.5
SNU13-204ENST00000402458 DISP2A7MBM2 1401 aa18.15■□□□□ 0.5
SNU13-204ENST00000402458 NEFMP07197 916 aa18.14■□□□□ 0.49
SNU13-204ENST00000402458 AEBP1Q8IUX7 1158 aa18.14■□□□□ 0.49
SNU13-204ENST00000402458 KDRP35968 1356 aa18.14■□□□□ 0.49
SNU13-204ENST00000402458 CCER2I3L3R5 266 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms