RNA–Protein interactions for RNA: ENST00000399004.6

GIN1-201, Transcript of gypsy retrotransposon integrase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GIN1, Length 3,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1-201ENST00000399004 PNNQ9H307 717 aaKnown RBP11.25□□□□□ -0.61
GIN1-201ENST00000399004 NWD1Q149M9 1564 aa11.25□□□□□ -0.61
GIN1-201ENST00000399004 GGT6Q6P531 493 aa11.24□□□□□ -0.61
GIN1-201ENST00000399004 FTSJ3Q8IY81 847 aaKnown RBP11.24□□□□□ -0.61
GIN1-201ENST00000399004 GOLGA6L3A6NEY3 463 aa11.24□□□□□ -0.61
GIN1-201ENST00000399004 NCOA3Q9Y6Q9 1424 aa11.23□□□□□ -0.61
GIN1-201ENST00000399004 ZNF853P0CG23 659 aa11.23□□□□□ -0.61
GIN1-201ENST00000399004 HDAC1Q13547 482 aaPredicted RBP11.23□□□□□ -0.61
GIN1-201ENST00000399004 SIPA1L3O60292 1781 aaPredicted RBP11.23□□□□□ -0.61
GIN1-201ENST00000399004 KDM3BQ7LBC6 1761 aa11.23□□□□□ -0.61
GIN1-201ENST00000399004 CRYBG1Q9Y4K1 1723 aa11.23□□□□□ -0.61
GIN1-201ENST00000399004 ALDH1L2Q3SY69 923 aa11.23□□□□□ -0.61
GIN1-201ENST00000399004 CFAP53Q96M91 514 aa11.23□□□□□ -0.61
GIN1-201ENST00000399004 LMO7Q8WWI1 1683 aa11.23□□□□□ -0.61
GIN1-201ENST00000399004 NCLP19338 710 aaKnown RBP11.22□□□□□ -0.61
GIN1-201ENST00000399004 UBE2Q2Q8WVN8 375 aa11.22□□□□□ -0.61
GIN1-201ENST00000399004 PTPRUQ92729 1446 aa11.22□□□□□ -0.61
GIN1-201ENST00000399004 U2SURPO15042 1029 aaKnown RBP11.22□□□□□ -0.61
GIN1-201ENST00000399004 RLBP1P12271 317 aa11.22□□□□□ -0.61
GIN1-201ENST00000399004 PDZRN3Q9UPQ7 1066 aa11.22□□□□□ -0.61
GIN1-201ENST00000399004 METP08581 1390 aa11.22□□□□□ -0.61
GIN1-201ENST00000399004 TSR2Q969E8 191 aaKnown RBP11.22□□□□□ -0.61
GIN1-201ENST00000399004 TBC1D2Q9BYX2 928 aa11.22□□□□□ -0.61
GIN1-201ENST00000399004 RSPH6AQ9H0K4 717 aa11.22□□□□□ -0.61
GIN1-201ENST00000399004 MYH16Q9H6N6 1097 aa11.22□□□□□ -0.61
GIN1-201ENST00000399004 TMEM2Q9UHN6 1383 aa11.21□□□□□ -0.61
GIN1-201ENST00000399004 KDM4FA0A1W2PPD8 638 aa11.21□□□□□ -0.61
GIN1-201ENST00000399004 TERF2IPQ9NYB0 399 aa11.21□□□□□ -0.61
GIN1-201ENST00000399004 PCDHB15Q9Y5E8 787 aa11.21□□□□□ -0.62
GIN1-201ENST00000399004 FCHSD2O94868 740 aa11.2□□□□□ -0.62
GIN1-201ENST00000399004 TRHP20396 242 aaPredicted RBP11.2□□□□□ -0.62
GIN1-201ENST00000399004 ITPRIPQ8IWB1 547 aa11.2□□□□□ -0.62
GIN1-201ENST00000399004 PMFBP1Q8TBY8 1022 aa11.2□□□□□ -0.62
GIN1-201ENST00000399004 TMPOP42166 694 aaKnown RBP11.2□□□□□ -0.62
GIN1-201ENST00000399004 MAPK8IP2Q13387 824 aaPredicted RBP11.2□□□□□ -0.62
GIN1-201ENST00000399004 FAM43AQ8N2R8 423 aa11.2□□□□□ -0.62
GIN1-201ENST00000399004 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.2□□□□□ -0.62
GIN1-201ENST00000399004 APBB1O00213 710 aa11.19□□□□□ -0.62
GIN1-201ENST00000399004 XRCC6P12956 609 aaKnown RBP eCLIP11.19□□□□□ -0.62
GIN1-201ENST00000399004 MVPQ14764 893 aaKnown RBP11.19□□□□□ -0.62
GIN1-201ENST00000399004 ARHGAP45Q92619 1136 aa11.19□□□□□ -0.62
GIN1-201ENST00000399004 TRIM44Q96DX7 344 aaPredicted RBP11.19□□□□□ -0.62
GIN1-201ENST00000399004 RGS12O14924 1447 aa11.19□□□□□ -0.62
GIN1-201ENST00000399004 LTN1O94822 1766 aa11.19□□□□□ -0.62
GIN1-201ENST00000399004 ABCC6O95255 1503 aa11.19□□□□□ -0.62
GIN1-201ENST00000399004 CABP2Q9NPB3 220 aa11.19□□□□□ -0.62
GIN1-201ENST00000399004 MST1RQ04912 1400 aa11.19□□□□□ -0.62
GIN1-201ENST00000399004 ANKARQ7Z5J8 1434 aa11.19□□□□□ -0.62
GIN1-201ENST00000399004 FOXD4L5Q5VV16 416 aaPredicted RBP11.18□□□□□ -0.62
GIN1-201ENST00000399004 FOXD4L4Q8WXT5 416 aaPredicted RBP11.18□□□□□ -0.62
GIN1-201ENST00000399004 PRAM1Q96QH2 718 aa11.18□□□□□ -0.62
GIN1-201ENST00000399004 U2AF1L5P0DN76 240 aaPredicted RBP11.18□□□□□ -0.62
GIN1-201ENST00000399004 U2AF1Q01081 240 aaKnown RBP eCLIP11.18□□□□□ -0.62
GIN1-201ENST00000399004 ELL2O00472 640 aaPredicted RBP11.18□□□□□ -0.62
GIN1-201ENST00000399004 CDK19Q9BWU1 502 aa11.18□□□□□ -0.62
GIN1-201ENST00000399004 NCAPD2Q15021 1401 aa11.17□□□□□ -0.62
GIN1-201ENST00000399004 TRPM3Q9HCF6 1732 aaPredicted RBP11.17□□□□□ -0.62
GIN1-201ENST00000399004 IL13P35225 146 aa11.17□□□□□ -0.62
GIN1-201ENST00000399004 TNRQ92752 1358 aa11.17□□□□□ -0.62
GIN1-201ENST00000399004 HSP90AA2PQ14568 343 aaPredicted RBP11.17□□□□□ -0.62
GIN1-201ENST00000399004 SMC5Q8IY18 1101 aa11.17□□□□□ -0.62
GIN1-201ENST00000399004 LNPKQ9C0E8 428 aa11.17□□□□□ -0.62
GIN1-201ENST00000399004 HSP90AB1P08238 724 aaKnown RBP11.16□□□□□ -0.62
GIN1-201ENST00000399004 L1TD1Q5T7N2 865 aaKnown RBP11.16□□□□□ -0.62
GIN1-201ENST00000399004 USP6P35125 1406 aa11.16□□□□□ -0.62
GIN1-201ENST00000399004 KIF16BQ96L93 1317 aa11.16□□□□□ -0.62
GIN1-201ENST00000399004 TRAK2O60296 914 aa11.16□□□□□ -0.62
GIN1-201ENST00000399004 POLKQ9UBT6 870 aa11.16□□□□□ -0.62
GIN1-201ENST00000399004 KDRP35968 1356 aa11.16□□□□□ -0.62
GIN1-201ENST00000399004 FBXO31Q5XUX0 539 aaPredicted RBP11.16□□□□□ -0.62
GIN1-201ENST00000399004 C1orf115Q9H7X2 142 aa11.16□□□□□ -0.62
GIN1-201ENST00000399004 SMC4Q9NTJ3 1288 aa11.16□□□□□ -0.62
GIN1-201ENST00000399004 ABCC4O15439 1325 aa11.15□□□□□ -0.62
GIN1-201ENST00000399004 WASLO00401 505 aaPredicted RBP11.15□□□□□ -0.62
GIN1-201ENST00000399004 PLEKHG3A1L390 1219 aa11.15□□□□□ -0.62
GIN1-201ENST00000399004 HSCBQ8IWL3 235 aa11.15□□□□□ -0.62
GIN1-201ENST00000399004 MPNDQ8N594 471 aa11.15□□□□□ -0.62
GIN1-201ENST00000399004 PKNOX2Q96KN3 472 aa11.15□□□□□ -0.62
GIN1-201ENST00000399004 FOXD4L6Q3SYB3 417 aaPredicted RBP11.14□□□□□ -0.63
GIN1-201ENST00000399004 FOXD4L3Q6VB84 417 aaPredicted RBP11.14□□□□□ -0.63
GIN1-201ENST00000399004 C22orf23Q9BZE7 217 aa11.14□□□□□ -0.63
GIN1-201ENST00000399004 ZBTB40Q9NUA8 1239 aa11.14□□□□□ -0.63
GIN1-201ENST00000399004 RTL1A6NKG5 1358 aa11.14□□□□□ -0.63
GIN1-201ENST00000399004 ANTXR1Q9H6X2 564 aa11.14□□□□□ -0.63
GIN1-201ENST00000399004 KIAA0232Q92628 1395 aa11.14□□□□□ -0.63
GIN1-201ENST00000399004 CEP170BQ9Y4F5 1589 aaPredicted RBP11.14□□□□□ -0.63
GIN1-201ENST00000399004 NFAT5O94916 1531 aa11.14□□□□□ -0.63
GIN1-201ENST00000399004 ROBO2Q9HCK4 1378 aa11.14□□□□□ -0.63
GIN1-201ENST00000399004 MCM4P33991 863 aa11.14□□□□□ -0.63
GIN1-201ENST00000399004 RBM10P98175 930 aaKnown RBP11.14□□□□□ -0.63
GIN1-201ENST00000399004 HDGFL2Q7Z4V5 671 aaPredicted RBP11.13□□□□□ -0.63
GIN1-201ENST00000399004 CRB1P82279 1406 aa11.13□□□□□ -0.63
GIN1-201ENST00000399004 PXDNLA1KZ92 1463 aa11.13□□□□□ -0.63
GIN1-201ENST00000399004 ARHGEF10O15013 1369 aa11.13□□□□□ -0.63
GIN1-201ENST00000399004 ZKSCAN2Q63HK3 967 aa11.13□□□□□ -0.63
GIN1-201ENST00000399004 TBC1D32Q96NH3 1257 aa11.13□□□□□ -0.63
GIN1-201ENST00000399004 IFT57Q9NWB7 429 aa11.13□□□□□ -0.63
GIN1-201ENST00000399004 DIAPH1O60610 1272 aaKnown RBP11.12□□□□□ -0.63
GIN1-201ENST00000399004 DDIT3P35638 169 aa11.12□□□□□ -0.63
GIN1-201ENST00000399004 STK26Q9P289 416 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms