RNA–Protein interactions for RNA: ENST00000398792.3

CDH23-204, Transcript of cadherin related 23, humanhuman

TSL 2

Gene CDH23, Length 1,649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-204ENST00000398792 U2AF1Q01081 240 aaKnown RBP eCLIP22.18■■□□□ 1.14
CDH23-204ENST00000398792 ARHGEF25Q86VW2 580 aa22.18■■□□□ 1.14
CDH23-204ENST00000398792 ABCC6O95255 1503 aa22.18■■□□□ 1.14
CDH23-204ENST00000398792 EIF4A2Q14240 407 aaKnown RBP22.17■■□□□ 1.14
CDH23-204ENST00000398792 CABLES1Q8TDN4 633 aa22.17■■□□□ 1.14
CDH23-204ENST00000398792 ZBED9Q6R2W3 1325 aa22.16■■□□□ 1.14
CDH23-204ENST00000398792 LRRC59Q96AG4 307 aaKnown RBP22.16■■□□□ 1.14
CDH23-204ENST00000398792 CCDC146Q8IYE0 955 aa22.15■■□□□ 1.14
CDH23-204ENST00000398792 IP6K1Q92551 441 aa22.15■■□□□ 1.14
CDH23-204ENST00000398792 CPDO75976 1380 aa22.15■■□□□ 1.14
CDH23-204ENST00000398792 COL18A1P39060 1754 aa22.13■■□□□ 1.13
CDH23-204ENST00000398792 ZBTB7CA1YPR0 619 aa22.13■■□□□ 1.13
CDH23-204ENST00000398792 CENPBP07199 599 aaPredicted RBP22.13■■□□□ 1.13
CDH23-204ENST00000398792 ZC3H6P61129 1189 aaKnown RBP22.12■■□□□ 1.13
CDH23-204ENST00000398792 RUNDC1Q96C34 613 aa22.11■■□□□ 1.13
CDH23-204ENST00000398792 KIAA0232Q92628 1395 aa22.1■■□□□ 1.13
CDH23-204ENST00000398792 SENP3-EIF4A1A0A087X0R7 540 aa22.09■■□□□ 1.13
CDH23-204ENST00000398792 RSPH6AQ9H0K4 717 aa22.09■■□□□ 1.13
CDH23-204ENST00000398792 RGPD5Q99666 1765 aa22.09■■□□□ 1.13
CDH23-204ENST00000398792 LMO7Q8WWI1 1683 aa22.09■■□□□ 1.13
CDH23-204ENST00000398792 CAMTA1Q9Y6Y1 1673 aa22.09■■□□□ 1.13
CDH23-204ENST00000398792 IGSF1Q8N6C5 1336 aa22.08■■□□□ 1.13
CDH23-204ENST00000398792 FCHSD2O94868 740 aa22.08■■□□□ 1.13
CDH23-204ENST00000398792 PLEKHF1Q96S99 279 aa22.08■■□□□ 1.13
CDH23-204ENST00000398792 HMOX1P09601 288 aa22.07■■□□□ 1.12
CDH23-204ENST00000398792 HAP1P54257 671 aaPredicted RBP22.07■■□□□ 1.12
CDH23-204ENST00000398792 APAF1O14727 1248 aa22.06■■□□□ 1.12
CDH23-204ENST00000398792 PNNQ9H307 717 aaKnown RBP22.06■■□□□ 1.12
CDH23-204ENST00000398792 KDRP35968 1356 aa22.06■■□□□ 1.12
CDH23-204ENST00000398792 FAM208AQ9UK61 1670 aaKnown RBP22.06■■□□□ 1.12
CDH23-204ENST00000398792 LTV1Q96GA3 475 aaPredicted RBP22.06■■□□□ 1.12
CDH23-204ENST00000398792 PRKAR2BP31323 418 aa22.05■■□□□ 1.12
CDH23-204ENST00000398792 EYA1Q99502 592 aa22.05■■□□□ 1.12
CDH23-204ENST00000398792 AXIN2Q9Y2T1 843 aa22.05■■□□□ 1.12
CDH23-204ENST00000398792 MAPK8IP3Q9UPT6 1336 aa22.05■■□□□ 1.12
CDH23-204ENST00000398792 RGPD2P0DJD1 1756 aa22.04■■□□□ 1.12
CDH23-204ENST00000398792 AEBP1Q8IUX7 1158 aa22.04■■□□□ 1.12
CDH23-204ENST00000398792 ERBB3P21860 1342 aa22.04■■□□□ 1.12
CDH23-204ENST00000398792 CHRNA2Q15822 529 aa22.03■■□□□ 1.12
CDH23-204ENST00000398792 SULT6B1Q6IMI4 303 aa22.03■■□□□ 1.12
CDH23-204ENST00000398792 PRDM11Q9NQV5 511 aa22.03■■□□□ 1.12
CDH23-204ENST00000398792 NCAPD2Q15021 1401 aa22.03■■□□□ 1.12
CDH23-204ENST00000398792 TCP11L2Q8N4U5 519 aa22.02■■□□□ 1.12
CDH23-204ENST00000398792 ANKRD24Q8TF21 1146 aa22.02■■□□□ 1.12
CDH23-204ENST00000398792 SALL2Q9Y467 1007 aaPredicted RBP22.02■■□□□ 1.12
CDH23-204ENST00000398792 NGEFQ8N5V2 710 aa22.02■■□□□ 1.11
CDH23-204ENST00000398792 COL14A1Q05707 1796 aaKnown RBP22.01■■□□□ 1.11
CDH23-204ENST00000398792 ZNF521Q96K83 1311 aa21.99■■□□□ 1.11
CDH23-204ENST00000398792 COL5A2P05997 1499 aaPredicted RBP21.99■■□□□ 1.11
CDH23-204ENST00000398792 NEFMP07197 916 aa21.98■■□□□ 1.11
CDH23-204ENST00000398792 JCADQ9P266 1359 aa21.98■■□□□ 1.11
CDH23-204ENST00000398792 NCBP3Q53F19 620 aaKnown RBP21.98■■□□□ 1.11
CDH23-204ENST00000398792 NBPF6Q5VWK0 638 aa21.98■■□□□ 1.11
CDH23-204ENST00000398792 NBPF4Q96M43 638 aa21.98■■□□□ 1.11
CDH23-204ENST00000398792 RRP7AQ9Y3A4 280 aaKnown RBP21.98■■□□□ 1.11
CDH23-204ENST00000398792 PHACTR3Q96KR7 559 aa21.97■■□□□ 1.11
CDH23-204ENST00000398792 TMPOP42166 694 aaKnown RBP21.96■■□□□ 1.11
CDH23-204ENST00000398792 USHBP1Q8N6Y0 703 aa21.95■■□□□ 1.1
CDH23-204ENST00000398792 PHF23Q9BUL5 403 aaPredicted RBP21.95■■□□□ 1.1
CDH23-204ENST00000398792 PLCH1Q4KWH8 1693 aa21.95■■□□□ 1.1
CDH23-204ENST00000398792 NEUROD2Q15784 382 aa21.95■■□□□ 1.1
CDH23-204ENST00000398792 CCDC27Q2M243 656 aa21.95■■□□□ 1.1
CDH23-204ENST00000398792 FAM83GA6ND36 823 aa21.93■■□□□ 1.1
CDH23-204ENST00000398792 PDE3BQ13370 1112 aa21.93■■□□□ 1.1
CDH23-204ENST00000398792 NFE2L2Q16236 605 aa21.93■■□□□ 1.1
CDH23-204ENST00000398792 DLG5Q8TDM6 1919 aa21.93■■□□□ 1.1
CDH23-204ENST00000398792 WDR17Q8IZU2 1322 aa21.92■■□□□ 1.1
CDH23-204ENST00000398792 CSB-PGBD3P0DP91 1061 aa21.91■■□□□ 1.1
CDH23-204ENST00000398792 WWC1Q8IX03 1113 aa21.91■■□□□ 1.1
CDH23-204ENST00000398792 HSPA1LP34931 641 aa21.91■■□□□ 1.1
CDH23-204ENST00000398792 RIPK4P57078 832 aa21.9■■□□□ 1.1
CDH23-204ENST00000398792 NRAPQ86VF7 1730 aa21.9■■□□□ 1.1
CDH23-204ENST00000398792 NLRP2Q9NX02 1062 aa21.89■■□□□ 1.09
CDH23-204ENST00000398792 TRIM35Q9UPQ4 493 aa21.89■■□□□ 1.09
CDH23-204ENST00000398792 NUTM2BA6NNL0 878 aaPredicted RBP21.88■■□□□ 1.09
CDH23-204ENST00000398792 NUTM2EB1AL46 878 aaPredicted RBP21.88■■□□□ 1.09
CDH23-204ENST00000398792 ADAMTS2O95450 1211 aa21.88■■□□□ 1.09
CDH23-204ENST00000398792 GOLGA2Q08379 1002 aa21.88■■□□□ 1.09
CDH23-204ENST00000398792 NUTM2AQ8IVF1 878 aaPredicted RBP21.88■■□□□ 1.09
CDH23-204ENST00000398792 CDCA7LQ96GN5 454 aa21.88■■□□□ 1.09
CDH23-204ENST00000398792 NWD2Q9ULI1 1742 aa21.88■■□□□ 1.09
CDH23-204ENST00000398792 SPATA31A6Q5VVP1 1343 aa21.87■■□□□ 1.09
CDH23-204ENST00000398792 BTG4Q9NY30 223 aa21.87■■□□□ 1.09
CDH23-204ENST00000398792 PLEKHG2Q9H7P9 1386 aa21.86■■□□□ 1.09
CDH23-204ENST00000398792 LRP6O75581 1613 aa21.86■■□□□ 1.09
CDH23-204ENST00000398792 MEGF6O75095 1541 aa21.86■■□□□ 1.09
CDH23-204ENST00000398792 PARP4Q9UKK3 1724 aaKnown RBP21.85■■□□□ 1.09
CDH23-204ENST00000398792 MTHFSDQ2M296 383 aaKnown RBP21.85■■□□□ 1.09
CDH23-204ENST00000398792 WDR63Q8IWG1 891 aa21.85■■□□□ 1.09
CDH23-204ENST00000398792 GAS2L2Q8NHY3 880 aa21.85■■□□□ 1.09
CDH23-204ENST00000398792 CRB1P82279 1406 aa21.85■■□□□ 1.09
CDH23-204ENST00000398792 LMOD3Q0VAK6 560 aa21.84■■□□□ 1.09
CDH23-204ENST00000398792 STRN4Q9NRL3 753 aa21.84■■□□□ 1.09
CDH23-204ENST00000398792 SLIT2O94813 1529 aa21.84■■□□□ 1.09
CDH23-204ENST00000398792 TOM1L2Q6ZVM7 507 aa21.84■■□□□ 1.09
CDH23-204ENST00000398792 PKD1L3Q7Z443 1732 aa21.83■■□□□ 1.09
CDH23-204ENST00000398792 EVA1CP58658 441 aa21.83■■□□□ 1.08
CDH23-204ENST00000398792 LARP1Q6PKG0 1096 aaKnown RBP21.83■■□□□ 1.08
CDH23-204ENST00000398792 LRRC37A3O60309 1634 aa21.82■■□□□ 1.08
CDH23-204ENST00000398792 E9PSI1 815 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms