RNA–Protein interactions for RNA: ENST00000397085.3

RAPGEF4-202, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 3

Gene RAPGEF4, Length 649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-202ENST00000397085 DHX9Q08211 1270 aaKnown RBP10.24□□□□□ -0.77
RAPGEF4-202ENST00000397085 PDE4DQ08499 809 aa10.24□□□□□ -0.77
RAPGEF4-202ENST00000397085 PPP1R26Q5T8A7 1209 aaPredicted RBP10.24□□□□□ -0.77
RAPGEF4-202ENST00000397085 TMEM151AQ8N4L1 468 aa10.24□□□□□ -0.77
RAPGEF4-202ENST00000397085 KCTD17Q8N5Z5 321 aa10.24□□□□□ -0.77
RAPGEF4-202ENST00000397085 SLC10A4Q96EP9 437 aa10.24□□□□□ -0.77
RAPGEF4-202ENST00000397085 RSPH6AQ9H0K4 717 aa10.24□□□□□ -0.77
RAPGEF4-202ENST00000397085 ERFEQ4G0M1 354 aa10.23□□□□□ -0.77
RAPGEF4-202ENST00000397085 RTL5Q5HYW3 569 aaPredicted RBP10.23□□□□□ -0.77
RAPGEF4-202ENST00000397085 ARHGAP9Q9BRR9 750 aa10.23□□□□□ -0.77
RAPGEF4-202ENST00000397085 GDF11O95390 407 aa10.21□□□□□ -0.77
RAPGEF4-202ENST00000397085 CBLBQ13191 982 aa10.21□□□□□ -0.77
RAPGEF4-202ENST00000397085 ZBTB33Q86T24 672 aa10.21□□□□□ -0.77
RAPGEF4-202ENST00000397085 CCDC155Q8N6L0 562 aa10.21□□□□□ -0.77
RAPGEF4-202ENST00000397085 GPR161Q8N6U8 529 aaKnown RBP10.21□□□□□ -0.77
RAPGEF4-202ENST00000397085 COL25A1Q9BXS0 654 aaPredicted RBP10.21□□□□□ -0.77
RAPGEF4-202ENST00000397085 SPINT1O43278 529 aa10.2□□□□□ -0.78
RAPGEF4-202ENST00000397085 PDXDC2PQ6P474 469 aa10.2□□□□□ -0.78
RAPGEF4-202ENST00000397085 Q6ZVU0 165 aa10.2□□□□□ -0.78
RAPGEF4-202ENST00000397085 SVOPQ8N4V2 548 aa10.2□□□□□ -0.78
RAPGEF4-202ENST00000397085 NANOS1Q8WY41 292 aaKnown RBP10.2□□□□□ -0.78
RAPGEF4-202ENST00000397085 KCTD15Q96SI1 283 aaPredicted RBP10.2□□□□□ -0.78
RAPGEF4-202ENST00000397085 ADAMTS8Q9UP79 889 aa10.2□□□□□ -0.78
RAPGEF4-202ENST00000397085 KRT76Q01546 638 aa10.19□□□□□ -0.78
RAPGEF4-202ENST00000397085 RASSF7Q02833 373 aa10.19□□□□□ -0.78
RAPGEF4-202ENST00000397085 SUZ12Q15022 739 aaKnown RBP10.19□□□□□ -0.78
RAPGEF4-202ENST00000397085 POLR3EQ9NVU0 708 aa10.19□□□□□ -0.78
RAPGEF4-202ENST00000397085 CDC14CA4D256 554 aa10.18□□□□□ -0.78
RAPGEF4-202ENST00000397085 FKBPLQ9UIM3 349 aa10.18□□□□□ -0.78
RAPGEF4-202ENST00000397085 ATP1B4Q9UN42 357 aaPredicted RBP10.18□□□□□ -0.78
RAPGEF4-202ENST00000397085 LOC100996750A0A140TA64 210 aa10.17□□□□□ -0.78
RAPGEF4-202ENST00000397085 CTDSPL2Q05D32 466 aa10.17□□□□□ -0.78
RAPGEF4-202ENST00000397085 SV2AQ7L0J3 742 aa10.17□□□□□ -0.78
RAPGEF4-202ENST00000397085 KRTAP4-6Q9BYQ5 205 aa10.17□□□□□ -0.78
RAPGEF4-202ENST00000397085 POLMQ9NP87 494 aaPredicted RBP10.16□□□□□ -0.78
RAPGEF4-202ENST00000397085 ZC3H4Q9UPT8 1303 aaKnown RBP10.15□□□□□ -0.78
RAPGEF4-202ENST00000397085 SLC35F4A4IF30 521 aa10.15□□□□□ -0.78
RAPGEF4-202ENST00000397085 RELBQ01201 579 aa10.15□□□□□ -0.78
RAPGEF4-202ENST00000397085 PTK2Q05397 1052 aa10.15□□□□□ -0.78
RAPGEF4-202ENST00000397085 ITGA6P23229 1130 aa10.14□□□□□ -0.79
RAPGEF4-202ENST00000397085 MARSP56192 900 aaKnown RBP10.14□□□□□ -0.79
RAPGEF4-202ENST00000397085 VWA5B2Q8N398 1253 aa10.14□□□□□ -0.79
RAPGEF4-202ENST00000397085 AGBL1Q96MI9 1066 aa10.14□□□□□ -0.79
RAPGEF4-202ENST00000397085 GSK3AP49840 483 aa10.13□□□□□ -0.79
RAPGEF4-202ENST00000397085 ZNF385CQ66K41 422 aaPredicted RBP10.13□□□□□ -0.79
RAPGEF4-202ENST00000397085 PNMA1Q8ND90 353 aa10.13□□□□□ -0.79
RAPGEF4-202ENST00000397085 INSM2Q96T92 566 aaPredicted RBP10.13□□□□□ -0.79
RAPGEF4-202ENST00000397085 CTSOP43234 321 aaPredicted RBP10.12□□□□□ -0.79
RAPGEF4-202ENST00000397085 NBPF20Q3BBV1 942 aa10.12□□□□□ -0.79
RAPGEF4-202ENST00000397085 INTS6LQ5JSJ4 861 aaKnown RBP10.12□□□□□ -0.79
RAPGEF4-202ENST00000397085 SLC24A3Q9HC58 644 aa10.12□□□□□ -0.79
RAPGEF4-202ENST00000397085 RNFT1Q5M7Z0 435 aa10.11□□□□□ -0.79
RAPGEF4-202ENST00000397085 LRRN4Q8WUT4 740 aa10.11□□□□□ -0.79
RAPGEF4-202ENST00000397085 NR6A1Q15406 480 aa10.1□□□□□ -0.79
RAPGEF4-202ENST00000397085 TRIM52Q96A61 297 aa10.1□□□□□ -0.79
RAPGEF4-202ENST00000397085 GPSM3Q9Y4H4 160 aa10.1□□□□□ -0.79
RAPGEF4-202ENST00000397085 MAP3K10Q02779 954 aa10.09□□□□□ -0.79
RAPGEF4-202ENST00000397085 ZNF395Q9H8N7 513 aaPredicted RBP10.09□□□□□ -0.79
RAPGEF4-202ENST00000397085 SLURP2P0DP57 97 aa10.08□□□□□ -0.8
RAPGEF4-202ENST00000397085 IRS1P35568 1242 aa10.08□□□□□ -0.8
RAPGEF4-202ENST00000397085 RAB15P59190 212 aa10.08□□□□□ -0.8
RAPGEF4-202ENST00000397085 SCARF2Q96GP6 870 aaPredicted RBP10.08□□□□□ -0.8
RAPGEF4-202ENST00000397085 KANK3Q6NY19 840 aa10.07□□□□□ -0.8
RAPGEF4-202ENST00000397085 ADAM32Q8TC27 787 aa10.07□□□□□ -0.8
RAPGEF4-202ENST00000397085 RNF217Q8TC41 542 aa10.07□□□□□ -0.8
RAPGEF4-202ENST00000397085 DNMT3AQ9Y6K1 912 aaPredicted RBP10.07□□□□□ -0.8
RAPGEF4-202ENST00000397085 SKIV2LQ15477 1246 aaKnown RBP10.06□□□□□ -0.8
RAPGEF4-202ENST00000397085 DZIP3Q86Y13 1208 aaKnown RBP10.06□□□□□ -0.8
RAPGEF4-202ENST00000397085 WHAMMQ8TF30 809 aa10.06□□□□□ -0.8
RAPGEF4-202ENST00000397085 BCANQ96GW7 911 aa10.06□□□□□ -0.8
RAPGEF4-202ENST00000397085 IGHA1P01876 353 aa10.05□□□□□ -0.8
RAPGEF4-202ENST00000397085 ADH1AP07327 375 aa10.05□□□□□ -0.8
RAPGEF4-202ENST00000397085 GPAT2Q6NUI2 795 aa10.05□□□□□ -0.8
RAPGEF4-202ENST00000397085 TMPRSS4Q9NRS4 437 aa10.05□□□□□ -0.8
RAPGEF4-202ENST00000397085 AP1G2O75843 785 aa10.04□□□□□ -0.8
RAPGEF4-202ENST00000397085 ARHGEF15O94989 841 aa10.04□□□□□ -0.8
RAPGEF4-202ENST00000397085 ZNF784Q8NCA9 323 aaPredicted RBP10.04□□□□□ -0.8
RAPGEF4-202ENST00000397085 ENAMQ9NRM1 1142 aa10.04□□□□□ -0.8
RAPGEF4-202ENST00000397085 ADAMTS2O95450 1211 aa10.03□□□□□ -0.8
RAPGEF4-202ENST00000397085 FOXK2Q01167 660 aa10.03□□□□□ -0.8
RAPGEF4-202ENST00000397085 LYSMD3Q7Z3D4 306 aa10.03□□□□□ -0.8
RAPGEF4-202ENST00000397085 PTGIRP43119 386 aa10.02□□□□□ -0.81
RAPGEF4-202ENST00000397085 SRSF11Q05519 484 aaKnown RBP10.02□□□□□ -0.81
RAPGEF4-202ENST00000397085 SH3D19Q5HYK7 790 aa10.01□□□□□ -0.81
RAPGEF4-202ENST00000397085 FOXR1Q6PIV2 292 aa10.01□□□□□ -0.81
RAPGEF4-202ENST00000397085 SENP3-EIF4A1A0A087X0R7 540 aa10□□□□□ -0.81
RAPGEF4-202ENST00000397085 ERVH48-1M5A8F1 160 aa10□□□□□ -0.81
RAPGEF4-202ENST00000397085 OCSTAMPQ9BR26 566 aa10□□□□□ -0.81
RAPGEF4-202ENST00000397085 FOXD4L5Q5VV16 416 aaPredicted RBP9.99□□□□□ -0.81
RAPGEF4-202ENST00000397085 PPP2R2DQ66LE6 453 aa9.99□□□□□ -0.81
RAPGEF4-202ENST00000397085 LYPD4Q6UWN0 246 aa9.99□□□□□ -0.81
RAPGEF4-202ENST00000397085 PROCA1Q8NCQ7 364 aaPredicted RBP9.98□□□□□ -0.81
RAPGEF4-202ENST00000397085 DDRGK1Q96HY6 314 aa9.98□□□□□ -0.81
RAPGEF4-202ENST00000397085 ADD1P35611 737 aaKnown RBP9.97□□□□□ -0.81
RAPGEF4-202ENST00000397085 PRICKLE2Q7Z3G6 844 aa9.97□□□□□ -0.81
RAPGEF4-202ENST00000397085 SEPT12Q8IYM1 358 aa9.97□□□□□ -0.81
RAPGEF4-202ENST00000397085 GMCL1Q96IK5 515 aa9.97□□□□□ -0.81
RAPGEF4-202ENST00000397085 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.97□□□□□ -0.81
RAPGEF4-202ENST00000397085 LILRA1O75019 489 aa9.96□□□□□ -0.82
RAPGEF4-202ENST00000397085 CELA2BP08218 269 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms