RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 PPM1GO15355 546 aaPredicted RBP28.8■■■□□ 2.2
FXN-202ENST00000396364 EVA1CP58658 441 aa28.8■■■□□ 2.2
FXN-202ENST00000396364 ZNF772Q68DY9 489 aaPredicted RBP28.8■■■□□ 2.2
FXN-202ENST00000396364 IP6K1Q92551 441 aa28.8■■■□□ 2.2
FXN-202ENST00000396364 USP21Q9UK80 565 aa28.8■■■□□ 2.2
FXN-202ENST00000396364 ANP32CO43423 234 aa28.79■■■□□ 2.2
FXN-202ENST00000396364 POLKQ9UBT6 870 aa28.79■■■□□ 2.2
FXN-202ENST00000396364 COL18A1P39060 1754 aa28.79■■■□□ 2.2
FXN-202ENST00000396364 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.78■■■□□ 2.2
FXN-202ENST00000396364 FBLN1P23142 703 aa28.78■■■□□ 2.2
FXN-202ENST00000396364 SMG6Q86US8 1419 aaKnown RBP28.77■■■□□ 2.2
FXN-202ENST00000396364 HOXC9P31274 260 aa28.77■■■□□ 2.2
FXN-202ENST00000396364 UNC5CLQ8IV45 518 aa28.77■■■□□ 2.2
FXN-202ENST00000396364 EMILIN1Q9Y6C2 1016 aa28.77■■■□□ 2.2
FXN-202ENST00000396364 CAMTA1Q9Y6Y1 1673 aa28.75■■■□□ 2.19
FXN-202ENST00000396364 RGPD5Q99666 1765 aa28.75■■■□□ 2.19
FXN-202ENST00000396364 CDK12Q9NYV4 1490 aaPredicted RBP28.74■■■□□ 2.19
FXN-202ENST00000396364 NRAPQ86VF7 1730 aa28.74■■■□□ 2.19
FXN-202ENST00000396364 INSRP06213 1382 aa28.74■■■□□ 2.19
FXN-202ENST00000396364 COL5A2P05997 1499 aaPredicted RBP28.73■■■□□ 2.19
FXN-202ENST00000396364 CSB-PGBD3P0DP91 1061 aa28.73■■■□□ 2.19
FXN-202ENST00000396364 CFAP53Q96M91 514 aa28.73■■■□□ 2.19
FXN-202ENST00000396364 PRKRIP1Q9H875 184 aaPredicted RBP28.73■■■□□ 2.19
FXN-202ENST00000396364 STRN4Q9NRL3 753 aa28.73■■■□□ 2.19
FXN-202ENST00000396364 PPP2R1AP30153 589 aa28.72■■■□□ 2.19
FXN-202ENST00000396364 MTHFSP49914 203 aa28.72■■■□□ 2.19
FXN-202ENST00000396364 TRPC5Q9UL62 973 aaPredicted RBP28.72■■■□□ 2.19
FXN-202ENST00000396364 BCL9LQ86UU0 1499 aa28.72■■■□□ 2.19
FXN-202ENST00000396364 PEAK1Q9H792 1746 aa28.72■■■□□ 2.19
FXN-202ENST00000396364 MYBBP1AQ9BQG0 1328 aaKnown RBP28.71■■■□□ 2.19
FXN-202ENST00000396364 FAM208AQ9UK61 1670 aaKnown RBP28.71■■■□□ 2.19
FXN-202ENST00000396364 AXIN2Q9Y2T1 843 aa28.71■■■□□ 2.19
FXN-202ENST00000396364 ANKRD24Q8TF21 1146 aa28.7■■■□□ 2.18
FXN-202ENST00000396364 ERBB3P21860 1342 aa28.69■■■□□ 2.18
FXN-202ENST00000396364 WDR17Q8IZU2 1322 aa28.69■■■□□ 2.18
FXN-202ENST00000396364 HSP90AB2PQ58FF8 381 aa28.68■■■□□ 2.18
FXN-202ENST00000396364 CCDC9Q9Y3X0 531 aaKnown RBP28.68■■■□□ 2.18
FXN-202ENST00000396364 VPS72Q15906 364 aa28.67■■■□□ 2.18
FXN-202ENST00000396364 TOM1L2Q6ZVM7 507 aa28.67■■■□□ 2.18
FXN-202ENST00000396364 DIEXFQ68CQ4 756 aaKnown RBP28.66■■■□□ 2.18
FXN-202ENST00000396364 LTV1Q96GA3 475 aaPredicted RBP28.66■■■□□ 2.18
FXN-202ENST00000396364 CRB1P82279 1406 aa28.66■■■□□ 2.18
FXN-202ENST00000396364 QTRT2Q9H974 415 aaKnown RBP28.65■■■□□ 2.18
FXN-202ENST00000396364 ATRNO75882 1429 aa28.63■■■□□ 2.17
FXN-202ENST00000396364 LARP1Q6PKG0 1096 aaKnown RBP28.63■■■□□ 2.17
FXN-202ENST00000396364 NLRP2Q9NX02 1062 aa28.62■■■□□ 2.17
FXN-202ENST00000396364 DIAPH1O60610 1272 aaKnown RBP28.6■■■□□ 2.17
FXN-202ENST00000396364 GJD4Q96KN9 370 aaPredicted RBP28.6■■■□□ 2.17
FXN-202ENST00000396364 THRAP3Q9Y2W1 955 aaKnown RBP28.6■■■□□ 2.17
FXN-202ENST00000396364 CARD10Q9BWT7 1032 aa28.59■■■□□ 2.17
FXN-202ENST00000396364 NUDCQ9Y266 331 aa28.59■■■□□ 2.17
FXN-202ENST00000396364 SPATA31A5Q5VU36 1347 aa28.59■■■□□ 2.17
FXN-202ENST00000396364 SPATA31A7Q8IWB4 1347 aa28.59■■■□□ 2.17
FXN-202ENST00000396364 EIF4A2Q14240 407 aaKnown RBP28.58■■■□□ 2.17
FXN-202ENST00000396364 SPATA31A1Q5TZJ5 1347 aa28.58■■■□□ 2.17
FXN-202ENST00000396364 RBM6P78332 1123 aaKnown RBP28.57■■■□□ 2.16
FXN-202ENST00000396364 TCP11L2Q8N4U5 519 aa28.56■■■□□ 2.16
FXN-202ENST00000396364 USP35Q9P2H5 1018 aa28.56■■■□□ 2.16
FXN-202ENST00000396364 RGS17Q9UGC6 210 aaPredicted RBP28.56■■■□□ 2.16
FXN-202ENST00000396364 RXRBP28702 533 aa28.55■■■□□ 2.16
FXN-202ENST00000396364 CDCA7Q9BWT1 371 aaPredicted RBP28.53■■■□□ 2.16
FXN-202ENST00000396364 COL3A1P02461 1466 aaPredicted RBP28.53■■■□□ 2.16
FXN-202ENST00000396364 IL13P35225 146 aa28.52■■■□□ 2.16
FXN-202ENST00000396364 RGPD2P0DJD1 1756 aa28.52■■■□□ 2.16
FXN-202ENST00000396364 BARGINQ6ZT62 677 aa28.51■■■□□ 2.15
FXN-202ENST00000396364 GLI3P10071 1580 aa28.5■■■□□ 2.15
FXN-202ENST00000396364 NBPF6Q5VWK0 638 aa28.5■■■□□ 2.15
FXN-202ENST00000396364 NBPF4Q96M43 638 aa28.5■■■□□ 2.15
FXN-202ENST00000396364 U2SURPO15042 1029 aaKnown RBP28.49■■■□□ 2.15
FXN-202ENST00000396364 POTEAQ6S8J7 498 aa28.49■■■□□ 2.15
FXN-202ENST00000396364 EYA1Q99502 592 aa28.49■■■□□ 2.15
FXN-202ENST00000396364 IGSF1Q8N6C5 1336 aa28.48■■■□□ 2.15
FXN-202ENST00000396364 A0A0G2JS52 829 aa28.48■■■□□ 2.15
FXN-202ENST00000396364 MYT1Q01538 1121 aa28.48■■■□□ 2.15
FXN-202ENST00000396364 RAPGEF4Q8WZA2 1011 aa28.48■■■□□ 2.15
FXN-202ENST00000396364 WNK3Q9BYP7 1800 aa28.47■■■□□ 2.15
FXN-202ENST00000396364 RGPD1P0DJD0 1748 aa28.46■■■□□ 2.15
FXN-202ENST00000396364 IL2RBP14784 551 aa28.46■■■□□ 2.15
FXN-202ENST00000396364 FAM98CQ17RN3 349 aaKnown RBP28.46■■■□□ 2.15
FXN-202ENST00000396364 NCAPD2Q15021 1401 aa28.44■■■□□ 2.14
FXN-202ENST00000396364 PARP4Q9UKK3 1724 aaKnown RBP28.44■■■□□ 2.14
FXN-202ENST00000396364 PLEKHG2Q9H7P9 1386 aa28.43■■■□□ 2.14
FXN-202ENST00000396364 ONECUT3O60422 494 aaPredicted RBP28.43■■■□□ 2.14
FXN-202ENST00000396364 TATP17735 454 aaPredicted RBP28.43■■■□□ 2.14
FXN-202ENST00000396364 WDR43Q15061 677 aaKnown RBP eCLIP28.43■■■□□ 2.14
FXN-202ENST00000396364 USHBP1Q8N6Y0 703 aa28.43■■■□□ 2.14
FXN-202ENST00000396364 U2AF1L5P0DN76 240 aaPredicted RBP28.42■■■□□ 2.14
FXN-202ENST00000396364 U2AF1Q01081 240 aaKnown RBP eCLIP28.42■■■□□ 2.14
FXN-202ENST00000396364 SULT6B1Q6IMI4 303 aa28.42■■■□□ 2.14
FXN-202ENST00000396364 PNNQ9H307 717 aaKnown RBP28.42■■■□□ 2.14
FXN-202ENST00000396364 MRS2Q9HD23 443 aa28.42■■■□□ 2.14
FXN-202ENST00000396364 KDRP35968 1356 aa28.4■■■□□ 2.14
FXN-202ENST00000396364 THSD7AQ9UPZ6 1657 aa28.39■■■□□ 2.14
FXN-202ENST00000396364 NEFMP07197 916 aa28.39■■■□□ 2.14
FXN-202ENST00000396364 DISP2A7MBM2 1401 aa28.38■■■□□ 2.13
FXN-202ENST00000396364 CCER2I3L3R5 266 aa28.38■■■□□ 2.13
FXN-202ENST00000396364 DDB1Q16531 1140 aa28.38■■■□□ 2.13
FXN-202ENST00000396364 EXOC5O00471 708 aa28.37■■■□□ 2.13
FXN-202ENST00000396364 HMOX1P09601 288 aa28.37■■■□□ 2.13
FXN-202ENST00000396364 SEPT12Q8IYM1 358 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms