RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 USP19O94966 1318 aa19.33■□□□□ 0.69
SCAF11-203ENST00000395453 NRKQ7Z2Y5 1582 aa19.33■□□□□ 0.68
SCAF11-203ENST00000395453 TRIM26Q12899 539 aaPredicted RBP19.32■□□□□ 0.68
SCAF11-203ENST00000395453 OVOS2A0A0G2JMS6 1433 aa19.32■□□□□ 0.68
SCAF11-203ENST00000395453 OVOS2A0A0J9YW53 1432 aa19.32■□□□□ 0.68
SCAF11-203ENST00000395453 OVOS2Q6IE36 1432 aa19.32■□□□□ 0.68
SCAF11-203ENST00000395453 LMO7Q8WWI1 1683 aa19.32■□□□□ 0.68
SCAF11-203ENST00000395453 NLRP13Q86W25 1043 aa19.31■□□□□ 0.68
SCAF11-203ENST00000395453 PARP4Q9UKK3 1724 aaKnown RBP19.31■□□□□ 0.68
SCAF11-203ENST00000395453 USP6P35125 1406 aa19.3■□□□□ 0.68
SCAF11-203ENST00000395453 GCP02774 474 aa19.29■□□□□ 0.68
SCAF11-203ENST00000395453 SLC4A2P04920 1241 aa19.29■□□□□ 0.68
SCAF11-203ENST00000395453 COL5A2P05997 1499 aaPredicted RBP19.29■□□□□ 0.68
SCAF11-203ENST00000395453 CRB1P82279 1406 aa19.29■□□□□ 0.68
SCAF11-203ENST00000395453 RGPD3A6NKT7 1758 aaPredicted RBP19.28■□□□□ 0.68
SCAF11-203ENST00000395453 RGPD4Q7Z3J3 1758 aa19.28■□□□□ 0.68
SCAF11-203ENST00000395453 ZNF784Q8NCA9 323 aaPredicted RBP19.28■□□□□ 0.68
SCAF11-203ENST00000395453 ANO8Q9HCE9 1232 aaPredicted RBP19.28■□□□□ 0.68
SCAF11-203ENST00000395453 UTRNP46939 3433 aa19.28■□□□□ 0.68
SCAF11-203ENST00000395453 ZNF692Q9BU19 519 aaPredicted RBP19.27■□□□□ 0.68
SCAF11-203ENST00000395453 BCL11BQ9C0K0 894 aaPredicted RBP19.27■□□□□ 0.68
SCAF11-203ENST00000395453 SBNO2Q9Y2G9 1366 aa19.27■□□□□ 0.68
SCAF11-203ENST00000395453 DDB1Q16531 1140 aa19.26■□□□□ 0.67
SCAF11-203ENST00000395453 PEAK1Q9H792 1746 aa19.26■□□□□ 0.67
SCAF11-203ENST00000395453 TONSLQ96HA7 1378 aa19.26■□□□□ 0.67
SCAF11-203ENST00000395453 CARD11Q9BXL7 1154 aa19.25■□□□□ 0.67
SCAF11-203ENST00000395453 CASZ1Q86V15 1759 aa19.25■□□□□ 0.67
SCAF11-203ENST00000395453 ZBTB7AO95365 584 aa19.25■□□□□ 0.67
SCAF11-203ENST00000395453 NLRP6P59044 892 aa19.25■□□□□ 0.67
SCAF11-203ENST00000395453 PTGER2P43116 358 aa19.24■□□□□ 0.67
SCAF11-203ENST00000395453 PDGFDQ9GZP0 370 aaPredicted RBP19.24■□□□□ 0.67
SCAF11-203ENST00000395453 CPSF1Q10570 1443 aaKnown RBP19.23■□□□□ 0.67
SCAF11-203ENST00000395453 SBF2Q86WG5 1849 aa19.23■□□□□ 0.67
SCAF11-203ENST00000395453 ZBTB7CA1YPR0 619 aa19.23■□□□□ 0.67
SCAF11-203ENST00000395453 PROM2Q8N271 834 aa19.23■□□□□ 0.67
SCAF11-203ENST00000395453 TTC21BQ7Z4L5 1316 aa19.22■□□□□ 0.67
SCAF11-203ENST00000395453 AKAP12Q02952 1782 aa19.22■□□□□ 0.67
SCAF11-203ENST00000395453 PIK3C2AO00443 1686 aa19.22■□□□□ 0.67
SCAF11-203ENST00000395453 SLIT3O75094 1523 aa19.22■□□□□ 0.67
SCAF11-203ENST00000395453 AATKQ6ZMQ8 1374 aa19.22■□□□□ 0.67
SCAF11-203ENST00000395453 TOM1L2Q6ZVM7 507 aa19.22■□□□□ 0.67
SCAF11-203ENST00000395453 PTF1AQ7RTS3 328 aa19.22■□□□□ 0.67
SCAF11-203ENST00000395453 ATF5Q9Y2D1 282 aaPredicted RBP19.22■□□□□ 0.67
SCAF11-203ENST00000395453 LRRC37A3O60309 1634 aa19.21■□□□□ 0.67
SCAF11-203ENST00000395453 CDCA7Q9BWT1 371 aaPredicted RBP19.21■□□□□ 0.67
SCAF11-203ENST00000395453 STK32BQ9NY57 414 aa19.21■□□□□ 0.67
SCAF11-203ENST00000395453 BCL9O00512 1426 aa19.2■□□□□ 0.66
SCAF11-203ENST00000395453 SENP3-EIF4A1A0A087X0R7 540 aa19.2■□□□□ 0.66
SCAF11-203ENST00000395453 SYT17Q9BSW7 474 aa19.2■□□□□ 0.66
SCAF11-203ENST00000395453 TTC21AQ8NDW8 1320 aa19.2■□□□□ 0.66
SCAF11-203ENST00000395453 MYOM1P52179 1685 aa19.19■□□□□ 0.66
SCAF11-203ENST00000395453 MARCH10Q8NA82 808 aaPredicted RBP19.19■□□□□ 0.66
SCAF11-203ENST00000395453 FHDC1Q9C0D6 1143 aaPredicted RBP19.19■□□□□ 0.66
SCAF11-203ENST00000395453 SLC15A2Q16348 729 aa19.18■□□□□ 0.66
SCAF11-203ENST00000395453 TXNRD1Q16881 649 aa19.18■□□□□ 0.66
SCAF11-203ENST00000395453 C1QTNF8P60827 252 aa19.17■□□□□ 0.66
SCAF11-203ENST00000395453 PUS7Q96PZ0 661 aaKnown RBP19.17■□□□□ 0.66
SCAF11-203ENST00000395453 MTFR1LQ9H019 292 aa19.17■□□□□ 0.66
SCAF11-203ENST00000395453 WDR17Q8IZU2 1322 aa19.17■□□□□ 0.66
SCAF11-203ENST00000395453 COL18A1P39060 1754 aa19.17■□□□□ 0.66
SCAF11-203ENST00000395453 KTN1Q86UP2 1357 aaKnown RBP19.17■□□□□ 0.66
SCAF11-203ENST00000395453 ARHGEF25Q86VW2 580 aa19.15■□□□□ 0.66
SCAF11-203ENST00000395453 CD163L1Q9NR16 1453 aa19.15■□□□□ 0.66
SCAF11-203ENST00000395453 MON2Q7Z3U7 1717 aa19.14■□□□□ 0.65
SCAF11-203ENST00000395453 CHD4Q14839 1912 aa19.14■□□□□ 0.65
SCAF11-203ENST00000395453 KCNH5Q8NCM2 988 aa19.14■□□□□ 0.65
SCAF11-203ENST00000395453 TESK2Q96S53 571 aa19.14■□□□□ 0.65
SCAF11-203ENST00000395453 AXIN2Q9Y2T1 843 aa19.14■□□□□ 0.65
SCAF11-203ENST00000395453 SGIP1Q9BQI5 828 aa19.13■□□□□ 0.65
SCAF11-203ENST00000395453 SLC12A5Q9H2X9 1139 aa19.13■□□□□ 0.65
SCAF11-203ENST00000395453 EXOC5O00471 708 aa19.12■□□□□ 0.65
SCAF11-203ENST00000395453 CARD10Q9BWT7 1032 aa19.12■□□□□ 0.65
SCAF11-203ENST00000395453 USP31Q70CQ4 1352 aa19.11■□□□□ 0.65
SCAF11-203ENST00000395453 ST20-MTHFSA0A0A6YYL1 179 aa19.11■□□□□ 0.65
SCAF11-203ENST00000395453 ZNF219Q9P2Y4 722 aaPredicted RBP19.11■□□□□ 0.65
SCAF11-203ENST00000395453 CSB-PGBD3P0DP91 1061 aa19.1■□□□□ 0.65
SCAF11-203ENST00000395453 TMC1Q8TDI8 760 aa19.1■□□□□ 0.65
SCAF11-203ENST00000395453 ARXQ96QS3 562 aa19.1■□□□□ 0.65
SCAF11-203ENST00000395453 NFAT5O94916 1531 aa19.1■□□□□ 0.65
SCAF11-203ENST00000395453 WNK3Q9BYP7 1800 aa19.1■□□□□ 0.65
SCAF11-203ENST00000395453 SLC24A1O60721 1099 aa19.09■□□□□ 0.65
SCAF11-203ENST00000395453 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.09■□□□□ 0.656e-6■■□□□ 14.4
SCAF11-203ENST00000395453 USP54Q70EL1 1684 aa19.09■□□□□ 0.65
SCAF11-203ENST00000395453 HDGFL2Q7Z4V5 671 aaPredicted RBP19.08■□□□□ 0.65
SCAF11-203ENST00000395453 TERF2IPQ9NYB0 399 aa19.08■□□□□ 0.65
SCAF11-203ENST00000395453 MAP3K5Q99683 1374 aa19.08■□□□□ 0.64
SCAF11-203ENST00000395453 EDC4Q6P2E9 1401 aaKnown RBP19.07■□□□□ 0.64
SCAF11-203ENST00000395453 RGPD5Q99666 1765 aa19.07■□□□□ 0.64
SCAF11-203ENST00000395453 SOX12O15370 315 aa19.06■□□□□ 0.64
SCAF11-203ENST00000395453 IFFO2Q5TF58 517 aa19.06■□□□□ 0.64
SCAF11-203ENST00000395453 NME9Q86XW9 330 aa19.06■□□□□ 0.64
SCAF11-203ENST00000395453 A0A1W2PP64 1363 aa19.06■□□□□ 0.64
SCAF11-203ENST00000395453 CCDC7Q96M83 1385 aa19.06■□□□□ 0.64
SCAF11-203ENST00000395453 GPR162Q16538 588 aa19.05■□□□□ 0.64
SCAF11-203ENST00000395453 ABCC6O95255 1503 aa19.05■□□□□ 0.64
SCAF11-203ENST00000395453 POTEHQ6S545 545 aa19.04■□□□□ 0.64
SCAF11-203ENST00000395453 TNS2Q63HR2 1409 aa19.04■□□□□ 0.64
SCAF11-203ENST00000395453 GIGYF1O75420 1035 aaPredicted RBP19.03■□□□□ 0.64
SCAF11-203ENST00000395453 TIMELESSQ9UNS1 1208 aa19.03■□□□□ 0.64
SCAF11-203ENST00000395453 CLSPNQ9HAW4 1339 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms