RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 NUDCQ9Y266 331 aa25.56■■□□□ 1.68
LMNB1-202ENST00000395354 EMILIN1Q9Y6C2 1016 aa25.56■■□□□ 1.68
LMNB1-202ENST00000395354 KIAA0232Q92628 1395 aa25.56■■□□□ 1.68
LMNB1-202ENST00000395354 MTHFSP49914 203 aa25.56■■□□□ 1.68
LMNB1-202ENST00000395354 CFAP53Q96M91 514 aa25.56■■□□□ 1.68
LMNB1-202ENST00000395354 CPDO75976 1380 aa25.55■■□□□ 1.68
LMNB1-202ENST00000395354 AMPHP49418 695 aa25.55■■□□□ 1.68
LMNB1-202ENST00000395354 PRDM11Q9NQV5 511 aa25.55■■□□□ 1.68
LMNB1-202ENST00000395354 SUPT16HQ9Y5B9 1047 aaKnown RBP25.54■■□□□ 1.68
LMNB1-202ENST00000395354 FAM83GA6ND36 823 aa25.52■■□□□ 1.68
LMNB1-202ENST00000395354 CHRNA2Q15822 529 aa25.52■■□□□ 1.68
LMNB1-202ENST00000395354 ILDR1Q86SU0 546 aaPredicted RBP25.52■■□□□ 1.68
LMNB1-202ENST00000395354 LTN1O94822 1766 aa25.51■■□□□ 1.67
LMNB1-202ENST00000395354 NGEFQ8N5V2 710 aa25.51■■□□□ 1.67
LMNB1-202ENST00000395354 IP6K1Q92551 441 aa25.5■■□□□ 1.67
LMNB1-202ENST00000395354 KIF24Q5T7B8 1368 aa25.48■■□□□ 1.67
LMNB1-202ENST00000395354 HOXC9P31274 260 aa25.48■■□□□ 1.67
LMNB1-202ENST00000395354 LRP6O75581 1613 aa25.48■■□□□ 1.67
LMNB1-202ENST00000395354 HSP90AB2PQ58FF8 381 aa25.48■■□□□ 1.67
LMNB1-202ENST00000395354 AXIN2Q9Y2T1 843 aa25.48■■□□□ 1.67
LMNB1-202ENST00000395354 FLT4P35916 1363 aa25.47■■□□□ 1.67
LMNB1-202ENST00000395354 FKBP8Q14318 412 aa25.47■■□□□ 1.67
LMNB1-202ENST00000395354 MEX3CQ5U5Q3 659 aaKnown RBP25.47■■□□□ 1.67
LMNB1-202ENST00000395354 RTL1A6NKG5 1358 aa25.46■■□□□ 1.67
LMNB1-202ENST00000395354 PEAK1Q9H792 1746 aa25.45■■□□□ 1.67
LMNB1-202ENST00000395354 NGLY1Q96IV0 654 aa25.45■■□□□ 1.66
LMNB1-202ENST00000395354 C8orf37Q96NL8 207 aa25.44■■□□□ 1.66
LMNB1-202ENST00000395354 COL18A1P39060 1754 aa25.43■■□□□ 1.66
LMNB1-202ENST00000395354 CDK12Q9NYV4 1490 aaPredicted RBP25.43■■□□□ 1.66
LMNB1-202ENST00000395354 BTG4Q9NY30 223 aa25.43■■□□□ 1.66
LMNB1-202ENST00000395354 COL14A1Q05707 1796 aaKnown RBP25.42■■□□□ 1.66
LMNB1-202ENST00000395354 ERICH6BQ5W0A0 696 aa25.41■■□□□ 1.66
LMNB1-202ENST00000395354 LTV1Q96GA3 475 aaPredicted RBP25.41■■□□□ 1.66
LMNB1-202ENST00000395354 COL3A1P02461 1466 aaPredicted RBP25.41■■□□□ 1.66
LMNB1-202ENST00000395354 SENP3-EIF4A1A0A087X0R7 540 aa25.4■■□□□ 1.66
LMNB1-202ENST00000395354 SALL2Q9Y467 1007 aaPredicted RBP25.4■■□□□ 1.66
LMNB1-202ENST00000395354 CAMTA1Q9Y6Y1 1673 aa25.4■■□□□ 1.66
LMNB1-202ENST00000395354 ZNF521Q96K83 1311 aa25.39■■□□□ 1.66
LMNB1-202ENST00000395354 ABCC6O95255 1503 aa25.39■■□□□ 1.66
LMNB1-202ENST00000395354 RGPD5Q99666 1765 aa25.39■■□□□ 1.66
LMNB1-202ENST00000395354 LMO7Q8WWI1 1683 aa25.39■■□□□ 1.65
LMNB1-202ENST00000395354 DIAPH1O60610 1272 aaKnown RBP25.39■■□□□ 1.65
LMNB1-202ENST00000395354 EVA1CP58658 441 aa25.39■■□□□ 1.65
LMNB1-202ENST00000395354 ANKRD24Q8TF21 1146 aa25.39■■□□□ 1.65
LMNB1-202ENST00000395354 RNF123Q5XPI4 1314 aa25.38■■□□□ 1.65
LMNB1-202ENST00000395354 EIF4A2Q14240 407 aaKnown RBP25.38■■□□□ 1.65
LMNB1-202ENST00000395354 NCBP3Q53F19 620 aaKnown RBP25.37■■□□□ 1.65
LMNB1-202ENST00000395354 FNBP4Q8N3X1 1017 aaPredicted RBP25.37■■□□□ 1.65
LMNB1-202ENST00000395354 RUNDC1Q96C34 613 aa25.37■■□□□ 1.65
LMNB1-202ENST00000395354 CCDC146Q8IYE0 955 aa25.36■■□□□ 1.65
LMNB1-202ENST00000395354 STRN4Q9NRL3 753 aa25.36■■□□□ 1.65
LMNB1-202ENST00000395354 ERBB3P21860 1342 aa25.36■■□□□ 1.65
LMNB1-202ENST00000395354 CSB-PGBD3P0DP91 1061 aa25.35■■□□□ 1.65
LMNB1-202ENST00000395354 IL13P35225 146 aa25.35■■□□□ 1.65
LMNB1-202ENST00000395354 SLIT2O94813 1529 aa25.35■■□□□ 1.65
LMNB1-202ENST00000395354 APAF1O14727 1248 aa25.35■■□□□ 1.65
LMNB1-202ENST00000395354 PLCH1Q4KWH8 1693 aa25.34■■□□□ 1.65
LMNB1-202ENST00000395354 COL5A2P05997 1499 aaPredicted RBP25.33■■□□□ 1.65
LMNB1-202ENST00000395354 UNC5CLQ8IV45 518 aa25.33■■□□□ 1.65
LMNB1-202ENST00000395354 AFF2P51816 1311 aa25.32■■□□□ 1.64
LMNB1-202ENST00000395354 USP21Q9UK80 565 aa25.32■■□□□ 1.64
LMNB1-202ENST00000395354 WDR17Q8IZU2 1322 aa25.32■■□□□ 1.64
LMNB1-202ENST00000395354 GOLGA2Q08379 1002 aa25.31■■□□□ 1.64
LMNB1-202ENST00000395354 LARP1Q6PKG0 1096 aaKnown RBP25.31■■□□□ 1.64
LMNB1-202ENST00000395354 CDCA7LQ96GN5 454 aa25.31■■□□□ 1.64
LMNB1-202ENST00000395354 NWD2Q9ULI1 1742 aa25.31■■□□□ 1.64
LMNB1-202ENST00000395354 U2SURPO15042 1029 aaKnown RBP25.31■■□□□ 1.64
LMNB1-202ENST00000395354 TOM1L2Q6ZVM7 507 aa25.31■■□□□ 1.64
LMNB1-202ENST00000395354 NLRP2Q9NX02 1062 aa25.31■■□□□ 1.64
LMNB1-202ENST00000395354 BCL9LQ86UU0 1499 aa25.3■■□□□ 1.64
LMNB1-202ENST00000395354 U2AF1L5P0DN76 240 aaPredicted RBP25.3■■□□□ 1.64
LMNB1-202ENST00000395354 U2AF1Q01081 240 aaKnown RBP eCLIP25.3■■□□□ 1.64
LMNB1-202ENST00000395354 EYA1Q99502 592 aa25.3■■□□□ 1.64
LMNB1-202ENST00000395354 NBPF6Q5VWK0 638 aa25.29■■□□□ 1.64
LMNB1-202ENST00000395354 NBPF4Q96M43 638 aa25.29■■□□□ 1.64
LMNB1-202ENST00000395354 PNNQ9H307 717 aaKnown RBP25.28■■□□□ 1.64
LMNB1-202ENST00000395354 RCAN3Q9UKA8 241 aa25.27■■□□□ 1.64
LMNB1-202ENST00000395354 CCDC27Q2M243 656 aa25.26■■□□□ 1.63
LMNB1-202ENST00000395354 NRAPQ86VF7 1730 aa25.26■■□□□ 1.63
LMNB1-202ENST00000395354 CRB1P82279 1406 aa25.25■■□□□ 1.63
LMNB1-202ENST00000395354 SLFN5Q08AF3 891 aa25.25■■□□□ 1.63
LMNB1-202ENST00000395354 TRMT2AQ8IZ69 625 aaKnown RBP25.25■■□□□ 1.63
LMNB1-202ENST00000395354 TCP11L2Q8N4U5 519 aa25.25■■□□□ 1.63
LMNB1-202ENST00000395354 CARD10Q9BWT7 1032 aa25.25■■□□□ 1.63
LMNB1-202ENST00000395354 VPS72Q15906 364 aa25.24■■□□□ 1.63
LMNB1-202ENST00000395354 USHBP1Q8N6Y0 703 aa25.24■■□□□ 1.63
LMNB1-202ENST00000395354 PHF23Q9BUL5 403 aaPredicted RBP25.24■■□□□ 1.63
LMNB1-202ENST00000395354 CCDC9Q9Y3X0 531 aaKnown RBP25.24■■□□□ 1.63
LMNB1-202ENST00000395354 IGSF1Q8N6C5 1336 aa25.24■■□□□ 1.63
LMNB1-202ENST00000395354 RGPD2P0DJD1 1756 aa25.24■■□□□ 1.63
LMNB1-202ENST00000395354 DUSP27Q5VZP5 1158 aa25.23■■□□□ 1.63
LMNB1-202ENST00000395354 USP35Q9P2H5 1018 aa25.23■■□□□ 1.63
LMNB1-202ENST00000395354 E9PSI1 815 aa25.22■■□□□ 1.63
LMNB1-202ENST00000395354 SULT6B1Q6IMI4 303 aa25.22■■□□□ 1.63
LMNB1-202ENST00000395354 HMOX1P09601 288 aa25.22■■□□□ 1.63
LMNB1-202ENST00000395354 ZNF772Q68DY9 489 aaPredicted RBP25.22■■□□□ 1.63
LMNB1-202ENST00000395354 WWC1Q8IX03 1113 aa25.22■■□□□ 1.63
LMNB1-202ENST00000395354 PLEKHF1Q96S99 279 aa25.22■■□□□ 1.63
LMNB1-202ENST00000395354 FAM208AQ9UK61 1670 aaKnown RBP25.22■■□□□ 1.63
LMNB1-202ENST00000395354 QTRT2Q9H974 415 aaKnown RBP25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms