RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 HSPA5P11021 654 aaKnown RBP11.92□□□□□ -0.5
APLF-202ENST00000394342 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.92□□□□□ -0.5
APLF-202ENST00000394342 KCNH5Q8NCM2 988 aa11.92□□□□□ -0.5
APLF-202ENST00000394342 KAT6BQ8WYB5 2073 aa11.91□□□□□ -0.5
APLF-202ENST00000394342 FAM208AQ9UK61 1670 aaKnown RBP11.91□□□□□ -0.5
APLF-202ENST00000394342 CHRNA2Q15822 529 aa11.91□□□□□ -0.5
APLF-202ENST00000394342 OVOS2A0A0J9YW53 1432 aa11.91□□□□□ -0.5
APLF-202ENST00000394342 OVOS2Q6IE36 1432 aa11.91□□□□□ -0.5
APLF-202ENST00000394342 COL5A2P05997 1499 aaPredicted RBP11.9□□□□□ -0.5
APLF-202ENST00000394342 NME9Q86XW9 330 aa11.9□□□□□ -0.5
APLF-202ENST00000394342 PARP4Q9UKK3 1724 aaKnown RBP11.9□□□□□ -0.5
APLF-202ENST00000394342 CCDC9Q9Y3X0 531 aaKnown RBP11.9□□□□□ -0.5
APLF-202ENST00000394342 AATKQ6ZMQ8 1374 aa11.9□□□□□ -0.5
APLF-202ENST00000394342 RGPD2P0DJD1 1756 aa11.9□□□□□ -0.51
APLF-202ENST00000394342 SPATA31A5Q5VU36 1347 aa11.89□□□□□ -0.51
APLF-202ENST00000394342 SPATA31A7Q8IWB4 1347 aa11.89□□□□□ -0.51
APLF-202ENST00000394342 ONECUT3O60422 494 aaPredicted RBP11.88□□□□□ -0.51
APLF-202ENST00000394342 ARHGEF25Q86VW2 580 aa11.88□□□□□ -0.51
APLF-202ENST00000394342 ZRANB1Q9UGI0 708 aa11.88□□□□□ -0.51
APLF-202ENST00000394342 EVA1CP58658 441 aa11.87□□□□□ -0.51
APLF-202ENST00000394342 STRN4Q9NRL3 753 aa11.87□□□□□ -0.51
APLF-202ENST00000394342 SBF2Q86WG5 1849 aa11.87□□□□□ -0.51
APLF-202ENST00000394342 SPATA31A1Q5TZJ5 1347 aa11.86□□□□□ -0.51
APLF-202ENST00000394342 ZBTB7CA1YPR0 619 aa11.86□□□□□ -0.51
APLF-202ENST00000394342 SLC4A2P04920 1241 aa11.86□□□□□ -0.51
APLF-202ENST00000394342 RGPD1P0DJD0 1748 aa11.86□□□□□ -0.51
APLF-202ENST00000394342 NSD3Q9BZ95 1437 aa11.86□□□□□ -0.51
APLF-202ENST00000394342 SOX12O15370 315 aa11.85□□□□□ -0.51
APLF-202ENST00000394342 SEPT12Q8IYM1 358 aa11.85□□□□□ -0.51
APLF-202ENST00000394342 COG3Q96JB2 828 aa11.85□□□□□ -0.51
APLF-202ENST00000394342 CRB1P82279 1406 aa11.85□□□□□ -0.51
APLF-202ENST00000394342 FAM98CQ17RN3 349 aaKnown RBP11.84□□□□□ -0.51
APLF-202ENST00000394342 LARP1Q6PKG0 1096 aaKnown RBP11.84□□□□□ -0.51
APLF-202ENST00000394342 POLR3GLQ9BT43 218 aa11.84□□□□□ -0.51
APLF-202ENST00000394342 LRRC37A3O60309 1634 aa11.83□□□□□ -0.52
APLF-202ENST00000394342 FYB1O15117 783 aa11.83□□□□□ -0.52
APLF-202ENST00000394342 BARGINQ6ZT62 677 aa11.83□□□□□ -0.52
APLF-202ENST00000394342 UPF1Q92900 1129 aaKnown RBP eCLIP11.83□□□□□ -0.52
APLF-202ENST00000394342 CARD14Q9BXL6 1004 aa11.83□□□□□ -0.52
APLF-202ENST00000394342 AXIN2Q9Y2T1 843 aa11.83□□□□□ -0.52
APLF-202ENST00000394342 THRAP3Q9Y2W1 955 aaKnown RBP11.83□□□□□ -0.52
APLF-202ENST00000394342 WDR17Q8IZU2 1322 aa11.83□□□□□ -0.52
APLF-202ENST00000394342 PEAK1Q9H792 1746 aa11.83□□□□□ -0.52
APLF-202ENST00000394342 TCP11L2Q8N4U5 519 aa11.82□□□□□ -0.52
APLF-202ENST00000394342 BLMP54132 1417 aaPredicted RBP11.82□□□□□ -0.52
APLF-202ENST00000394342 TNS1Q9HBL0 1735 aaKnown RBP11.82□□□□□ -0.52
APLF-202ENST00000394342 A0A0G2JS52 829 aa11.81□□□□□ -0.52
APLF-202ENST00000394342 C11orf95C9JLR9 678 aaPredicted RBP11.81□□□□□ -0.52
APLF-202ENST00000394342 MYT1Q01538 1121 aa11.81□□□□□ -0.52
APLF-202ENST00000394342 KRT27Q7Z3Y8 459 aa11.81□□□□□ -0.52
APLF-202ENST00000394342 GGNBP2Q9H3C7 697 aa11.81□□□□□ -0.52
APLF-202ENST00000394342 CGNL1Q0VF96 1302 aa11.81□□□□□ -0.52
APLF-202ENST00000394342 RTL1A6NKG5 1358 aa11.8□□□□□ -0.52
APLF-202ENST00000394342 TOM1L2Q6ZVM7 507 aa11.8□□□□□ -0.52
APLF-202ENST00000394342 USP35Q9P2H5 1018 aa11.8□□□□□ -0.52
APLF-202ENST00000394342 KIF7Q2M1P5 1343 aa11.8□□□□□ -0.52
APLF-202ENST00000394342 IP6K1Q92551 441 aa11.79□□□□□ -0.52
APLF-202ENST00000394342 CARD10Q9BWT7 1032 aa11.79□□□□□ -0.52
APLF-202ENST00000394342 PANK3Q9H999 370 aa11.79□□□□□ -0.52
APLF-202ENST00000394342 ERBB3P21860 1342 aa11.79□□□□□ -0.52
APLF-202ENST00000394342 CCDC7Q96M83 1385 aa11.79□□□□□ -0.52
APLF-202ENST00000394342 MYCNP04198 464 aaPredicted RBP11.78□□□□□ -0.52
APLF-202ENST00000394342 CSB-PGBD3P0DP91 1061 aa11.78□□□□□ -0.52
APLF-202ENST00000394342 CCDC125Q86Z20 511 aa11.78□□□□□ -0.52
APLF-202ENST00000394342 MAP3K19Q56UN5 1328 aa11.78□□□□□ -0.52
APLF-202ENST00000394342 NSD2O96028 1365 aa11.78□□□□□ -0.52
APLF-202ENST00000394342 KIF24Q5T7B8 1368 aa11.78□□□□□ -0.52
APLF-202ENST00000394342 SHANK3Q9BYB0 1731 aa11.77□□□□□ -0.52
APLF-202ENST00000394342 ANKRD24Q8TF21 1146 aa11.77□□□□□ -0.53
APLF-202ENST00000394342 CDCA7Q9BWT1 371 aaPredicted RBP11.77□□□□□ -0.53
APLF-202ENST00000394342 DISP2A7MBM2 1401 aa11.77□□□□□ -0.53
APLF-202ENST00000394342 HOXC9P31274 260 aa11.76□□□□□ -0.53
APLF-202ENST00000394342 AMPHP49418 695 aa11.76□□□□□ -0.53
APLF-202ENST00000394342 RGPD3A6NKT7 1758 aaPredicted RBP11.75□□□□□ -0.53
APLF-202ENST00000394342 RGPD4Q7Z3J3 1758 aa11.75□□□□□ -0.53
APLF-202ENST00000394342 FBLN1P23142 703 aa11.75□□□□□ -0.53
APLF-202ENST00000394342 RRS1Q15050 365 aaKnown RBP11.75□□□□□ -0.53
APLF-202ENST00000394342 U3KPZ7 1027 aaPredicted RBP11.75□□□□□ -0.53
APLF-202ENST00000394342 FLT4P35916 1363 aa11.75□□□□□ -0.53
APLF-202ENST00000394342 PDE3BQ13370 1112 aa11.74□□□□□ -0.53
APLF-202ENST00000394342 NLRP2Q9NX02 1062 aa11.74□□□□□ -0.53
APLF-202ENST00000394342 INSRP06213 1382 aa11.74□□□□□ -0.53
APLF-202ENST00000394342 SMG6Q86US8 1419 aaKnown RBP11.74□□□□□ -0.53
APLF-202ENST00000394342 VIRMAQ69YN4 1812 aaKnown RBP11.74□□□□□ -0.53
APLF-202ENST00000394342 DDB1Q16531 1140 aa11.73□□□□□ -0.53
APLF-202ENST00000394342 TNS2Q63HR2 1409 aa11.73□□□□□ -0.53
APLF-202ENST00000394342 WASHC2AQ641Q2 1341 aa11.73□□□□□ -0.53
APLF-202ENST00000394342 FAM196AQ6ZSG2 479 aa11.73□□□□□ -0.53
APLF-202ENST00000394342 KNSTRNQ9Y448 316 aa11.73□□□□□ -0.53
APLF-202ENST00000394342 PKD1L3Q7Z443 1732 aa11.72□□□□□ -0.53
APLF-202ENST00000394342 NHSQ6T4R5 1651 aa11.72□□□□□ -0.53
APLF-202ENST00000394342 RREB1Q92766 1687 aa11.72□□□□□ -0.53
APLF-202ENST00000394342 OVOS2A0A0G2JMS6 1433 aa11.72□□□□□ -0.53
APLF-202ENST00000394342 LTV1Q96GA3 475 aaPredicted RBP11.72□□□□□ -0.53
APLF-202ENST00000394342 ATXN8OSP0DMR3 200 aa11.71□□□□□ -0.53
APLF-202ENST00000394342 SF3B2Q13435 895 aaKnown RBP11.71□□□□□ -0.53
APLF-202ENST00000394342 FAM182BQ5T319 152 aa11.71□□□□□ -0.53
APLF-202ENST00000394342 EMILIN1Q9Y6C2 1016 aa11.71□□□□□ -0.53
APLF-202ENST00000394342 BTAF1O14981 1849 aa11.71□□□□□ -0.54
APLF-202ENST00000394342 ITGB4P16144 1822 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms