RNA–Protein interactions for RNA: ENST00000394239.7

TUBD1-205, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-205ENST00000394239 POTEAQ6S8J7 498 aa16.44■□□□□ 0.22
TUBD1-205ENST00000394239 SMG6Q86US8 1419 aaKnown RBP16.43■□□□□ 0.22
TUBD1-205ENST00000394239 ARHGEF25Q86VW2 580 aa16.43■□□□□ 0.22
TUBD1-205ENST00000394239 KCNH5Q8NCM2 988 aa16.43■□□□□ 0.22
TUBD1-205ENST00000394239 BTG4Q9NY30 223 aa16.43■□□□□ 0.22
TUBD1-205ENST00000394239 USP21Q9UK80 565 aa16.43■□□□□ 0.22
TUBD1-205ENST00000394239 AXIN2Q9Y2T1 843 aa16.43■□□□□ 0.22
TUBD1-205ENST00000394239 LMO7Q8WWI1 1683 aa16.43■□□□□ 0.22
TUBD1-205ENST00000394239 COL14A1Q05707 1796 aaKnown RBP16.43■□□□□ 0.22
TUBD1-205ENST00000394239 CAMTA1Q9Y6Y1 1673 aa16.42■□□□□ 0.22
TUBD1-205ENST00000394239 COL18A1P39060 1754 aa16.41■□□□□ 0.22
TUBD1-205ENST00000394239 ERICH6BQ5W0A0 696 aa16.41■□□□□ 0.22
TUBD1-205ENST00000394239 NUDCQ9Y266 331 aa16.41■□□□□ 0.22
TUBD1-205ENST00000394239 NRAPQ86VF7 1730 aa16.41■□□□□ 0.22
TUBD1-205ENST00000394239 RRS1Q15050 365 aaKnown RBP16.4■□□□□ 0.22
TUBD1-205ENST00000394239 LTN1O94822 1766 aa16.4■□□□□ 0.22
TUBD1-205ENST00000394239 TNNT2P45379 298 aaPredicted RBP16.4■□□□□ 0.22
TUBD1-205ENST00000394239 ANKRD26Q9UPS8 1709 aa16.39■□□□□ 0.22
TUBD1-205ENST00000394239 MAP3K19Q56UN5 1328 aa16.39■□□□□ 0.21
TUBD1-205ENST00000394239 AATKQ6ZMQ8 1374 aa16.39■□□□□ 0.21
TUBD1-205ENST00000394239 NWD2Q9ULI1 1742 aa16.39■□□□□ 0.21
TUBD1-205ENST00000394239 IRX6P78412 446 aaPredicted RBP16.39■□□□□ 0.21
TUBD1-205ENST00000394239 UNC5CLQ8IV45 518 aa16.39■□□□□ 0.21
TUBD1-205ENST00000394239 INSRP06213 1382 aa16.38■□□□□ 0.21
TUBD1-205ENST00000394239 RGPD5Q99666 1765 aa16.38■□□□□ 0.21
TUBD1-205ENST00000394239 QTRT2Q9H974 415 aaKnown RBP16.38■□□□□ 0.21
TUBD1-205ENST00000394239 NPC1L1Q9UHC9 1359 aa16.38■□□□□ 0.21
TUBD1-205ENST00000394239 ZNF772Q68DY9 489 aaPredicted RBP16.37■□□□□ 0.21
TUBD1-205ENST00000394239 ATRNO75882 1429 aa16.37■□□□□ 0.21
TUBD1-205ENST00000394239 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.37■□□□□ 0.21
TUBD1-205ENST00000394239 PEAK1Q9H792 1746 aa16.37■□□□□ 0.21
TUBD1-205ENST00000394239 STRN4Q9NRL3 753 aa16.37■□□□□ 0.21
TUBD1-205ENST00000394239 EMILIN1Q9Y6C2 1016 aa16.37■□□□□ 0.21
TUBD1-205ENST00000394239 COL5A2P05997 1499 aaPredicted RBP16.36■□□□□ 0.21
TUBD1-205ENST00000394239 NSD2O96028 1365 aa16.36■□□□□ 0.21
TUBD1-205ENST00000394239 LARP1Q6PKG0 1096 aaKnown RBP16.35■□□□□ 0.21
TUBD1-205ENST00000394239 MORC1Q86VD1 984 aa16.35■□□□□ 0.21
TUBD1-205ENST00000394239 PPP2R1AP30153 589 aa16.34■□□□□ 0.21
TUBD1-205ENST00000394239 POLKQ9UBT6 870 aa16.34■□□□□ 0.21
TUBD1-205ENST00000394239 TRPC5Q9UL62 973 aaPredicted RBP16.34■□□□□ 0.21
TUBD1-205ENST00000394239 GLI3P10071 1580 aa16.34■□□□□ 0.21
TUBD1-205ENST00000394239 SENP3-EIF4A1A0A087X0R7 540 aa16.34■□□□□ 0.21
TUBD1-205ENST00000394239 HOXC9P31274 260 aa16.34■□□□□ 0.21
TUBD1-205ENST00000394239 ILDR2Q71H61 639 aa16.34■□□□□ 0.21
TUBD1-205ENST00000394239 VPS72Q15906 364 aa16.33■□□□□ 0.2
TUBD1-205ENST00000394239 IP6K1Q92551 441 aa16.33■□□□□ 0.2
TUBD1-205ENST00000394239 BLMP54132 1417 aaPredicted RBP16.33■□□□□ 0.2
TUBD1-205ENST00000394239 MAP2P11137 1827 aaKnown RBP16.32■□□□□ 0.2
TUBD1-205ENST00000394239 HSP90AB2PQ58FF8 381 aa16.32■□□□□ 0.2
TUBD1-205ENST00000394239 GJD4Q96KN9 370 aaPredicted RBP16.32■□□□□ 0.2
TUBD1-205ENST00000394239 PPM1GO15355 546 aaPredicted RBP16.31■□□□□ 0.2
TUBD1-205ENST00000394239 AMPHP49418 695 aa16.31■□□□□ 0.2
TUBD1-205ENST00000394239 EVA1CP58658 441 aa16.31■□□□□ 0.2
TUBD1-205ENST00000394239 ABCC6O95255 1503 aa16.31■□□□□ 0.2
TUBD1-205ENST00000394239 ERBB3P21860 1342 aa16.3■□□□□ 0.2
TUBD1-205ENST00000394239 PDE3BQ13370 1112 aa16.3■□□□□ 0.2
TUBD1-205ENST00000394239 SPATA31A5Q5VU36 1347 aa16.3■□□□□ 0.2
TUBD1-205ENST00000394239 SPATA31A7Q8IWB4 1347 aa16.3■□□□□ 0.2
TUBD1-205ENST00000394239 EP400Q96L91 3159 aa16.3■□□□□ 0.2
TUBD1-205ENST00000394239 PPP4R2Q9NY27 417 aa16.3■□□□□ 0.2
TUBD1-205ENST00000394239 USP35Q9P2H5 1018 aa16.3■□□□□ 0.2
TUBD1-205ENST00000394239 CCDC9Q9Y3X0 531 aaKnown RBP16.3■□□□□ 0.2
TUBD1-205ENST00000394239 ANKRD24Q8TF21 1146 aa16.3■□□□□ 0.2
TUBD1-205ENST00000394239 LTV1Q96GA3 475 aaPredicted RBP16.3■□□□□ 0.2
TUBD1-205ENST00000394239 SPATA31A1Q5TZJ5 1347 aa16.29■□□□□ 0.2
TUBD1-205ENST00000394239 WDR17Q8IZU2 1322 aa16.29■□□□□ 0.2
TUBD1-205ENST00000394239 RXRBP28702 533 aa16.29■□□□□ 0.2
TUBD1-205ENST00000394239 RBM6P78332 1123 aaKnown RBP16.29■□□□□ 0.2
TUBD1-205ENST00000394239 WDR43Q15061 677 aaKnown RBP eCLIP16.29■□□□□ 0.2
TUBD1-205ENST00000394239 TSHZ2Q9NRE2 1034 aa16.29■□□□□ 0.2
TUBD1-205ENST00000394239 RTL1A6NKG5 1358 aa16.28■□□□□ 0.2
TUBD1-205ENST00000394239 FLT4P35916 1363 aa16.28■□□□□ 0.2
TUBD1-205ENST00000394239 RNF123Q5XPI4 1314 aa16.28■□□□□ 0.2
TUBD1-205ENST00000394239 SALL2Q9Y467 1007 aaPredicted RBP16.27■□□□□ 0.2
TUBD1-205ENST00000394239 RGS12O14924 1447 aa16.27■□□□□ 0.2
TUBD1-205ENST00000394239 CRB1P82279 1406 aa16.27■□□□□ 0.2
TUBD1-205ENST00000394239 FAM98CQ17RN3 349 aaKnown RBP16.27■□□□□ 0.19
TUBD1-205ENST00000394239 TOM1L2Q6ZVM7 507 aa16.27■□□□□ 0.19
TUBD1-205ENST00000394239 CSB-PGBD3P0DP91 1061 aa16.26■□□□□ 0.19
TUBD1-205ENST00000394239 ADAMTS8Q9UP79 889 aa16.26■□□□□ 0.19
TUBD1-205ENST00000394239 RGPD2P0DJD1 1756 aa16.26■□□□□ 0.19
TUBD1-205ENST00000394239 MTHFSP49914 203 aa16.25■□□□□ 0.19
TUBD1-205ENST00000394239 KIF24Q5T7B8 1368 aa16.25■□□□□ 0.19
TUBD1-205ENST00000394239 NBPF6Q5VWK0 638 aa16.24■□□□□ 0.19
TUBD1-205ENST00000394239 NBPF4Q96M43 638 aa16.24■□□□□ 0.19
TUBD1-205ENST00000394239 NLRP2Q9NX02 1062 aa16.24■□□□□ 0.19
TUBD1-205ENST00000394239 ONECUT3O60422 494 aaPredicted RBP16.23■□□□□ 0.19
TUBD1-205ENST00000394239 TCP11L2Q8N4U5 519 aa16.23■□□□□ 0.19
TUBD1-205ENST00000394239 CARD10Q9BWT7 1032 aa16.23■□□□□ 0.19
TUBD1-205ENST00000394239 CDK12Q9NYV4 1490 aaPredicted RBP16.23■□□□□ 0.19
TUBD1-205ENST00000394239 EIF4A2Q14240 407 aaKnown RBP16.22■□□□□ 0.19
TUBD1-205ENST00000394239 USHBP1Q8N6Y0 703 aa16.22■□□□□ 0.19
TUBD1-205ENST00000394239 SEPT12Q8IYM1 358 aa16.21■□□□□ 0.19
TUBD1-205ENST00000394239 THSD7AQ9UPZ6 1657 aa16.21■□□□□ 0.19
TUBD1-205ENST00000394239 FAM208AQ9UK61 1670 aaKnown RBP16.21■□□□□ 0.18
TUBD1-205ENST00000394239 BARGINQ6ZT62 677 aa16.2■□□□□ 0.18
TUBD1-205ENST00000394239 RCAN3Q9UKA8 241 aa16.2■□□□□ 0.18
TUBD1-205ENST00000394239 COL3A1P02461 1466 aaPredicted RBP16.19■□□□□ 0.18
TUBD1-205ENST00000394239 EYA1Q99502 592 aa16.19■□□□□ 0.18
TUBD1-205ENST00000394239 DISP2A7MBM2 1401 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms