RNA–Protein interactions for RNA: ENST00000393196.7

NME1-203, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-203ENST00000393196 NSD2O96028 1365 aa25.73■■□□□ 1.71
NME1-203ENST00000393196 CCDC7Q96M83 1385 aa25.73■■□□□ 1.71
NME1-203ENST00000393196 ONECUT3O60422 494 aaPredicted RBP25.73■■□□□ 1.71
NME1-203ENST00000393196 SPATA31A1Q5TZJ5 1347 aa25.72■■□□□ 1.71
NME1-203ENST00000393196 GLI3P10071 1580 aa25.71■■□□□ 1.71
NME1-203ENST00000393196 THRAP3Q9Y2W1 955 aaKnown RBP25.71■■□□□ 1.71
NME1-203ENST00000393196 KNSTRNQ9Y448 316 aa25.71■■□□□ 1.71
NME1-203ENST00000393196 WDR17Q8IZU2 1322 aa25.69■■□□□ 1.7
NME1-203ENST00000393196 BLMP54132 1417 aaPredicted RBP25.69■■□□□ 1.7
NME1-203ENST00000393196 CRB1P82279 1406 aa25.69■■□□□ 1.7
NME1-203ENST00000393196 RTL1A6NKG5 1358 aa25.69■■□□□ 1.7
NME1-203ENST00000393196 LARP1Q6PKG0 1096 aaKnown RBP25.68■■□□□ 1.7
NME1-203ENST00000393196 KIF24Q5T7B8 1368 aa25.68■■□□□ 1.7
NME1-203ENST00000393196 WASHC2AQ641Q2 1341 aa25.67■■□□□ 1.7
NME1-203ENST00000393196 CSB-PGBD3P0DP91 1061 aa25.67■■□□□ 1.7
NME1-203ENST00000393196 BARGINQ6ZT62 677 aa25.67■■□□□ 1.7
NME1-203ENST00000393196 SEPT12Q8IYM1 358 aa25.67■■□□□ 1.7
NME1-203ENST00000393196 TCP11L2Q8N4U5 519 aa25.67■■□□□ 1.7
NME1-203ENST00000393196 IP6K1Q92551 441 aa25.67■■□□□ 1.7
NME1-203ENST00000393196 AXIN2Q9Y2T1 843 aa25.67■■□□□ 1.7
NME1-203ENST00000393196 A0A0G2JS52 829 aa25.66■■□□□ 1.7
NME1-203ENST00000393196 AMPHP49418 695 aa25.66■■□□□ 1.7
NME1-203ENST00000393196 MYT1Q01538 1121 aa25.66■■□□□ 1.7
NME1-203ENST00000393196 FAM98CQ17RN3 349 aaKnown RBP25.66■■□□□ 1.7
NME1-203ENST00000393196 TOM1L2Q6ZVM7 507 aa25.66■■□□□ 1.7
NME1-203ENST00000393196 MAP3K19Q56UN5 1328 aa25.65■■□□□ 1.7
NME1-203ENST00000393196 KIF20BQ96Q89 1820 aa25.65■■□□□ 1.7
NME1-203ENST00000393196 COL18A1P39060 1754 aa25.64■■□□□ 1.7
NME1-203ENST00000393196 ERBB3P21860 1342 aa25.63■■□□□ 1.69
NME1-203ENST00000393196 CARD10Q9BWT7 1032 aa25.63■■□□□ 1.69
NME1-203ENST00000393196 CDCA7Q9BWT1 371 aaPredicted RBP25.62■■□□□ 1.69
NME1-203ENST00000393196 USP35Q9P2H5 1018 aa25.61■■□□□ 1.69
NME1-203ENST00000393196 HOXC9P31274 260 aa25.6■■□□□ 1.69
NME1-203ENST00000393196 ANKRD24Q8TF21 1146 aa25.6■■□□□ 1.69
NME1-203ENST00000393196 FLT4P35916 1363 aa25.58■■□□□ 1.69
NME1-203ENST00000393196 SMG6Q86US8 1419 aaKnown RBP25.58■■□□□ 1.69
NME1-203ENST00000393196 RRS1Q15050 365 aaKnown RBP25.58■■□□□ 1.69
NME1-203ENST00000393196 KRT27Q7Z3Y8 459 aa25.58■■□□□ 1.69
NME1-203ENST00000393196 LTN1O94822 1766 aa25.57■■□□□ 1.68
NME1-203ENST00000393196 MORC1Q86VD1 984 aa25.57■■□□□ 1.68
NME1-203ENST00000393196 NLRP2Q9NX02 1062 aa25.56■■□□□ 1.68
NME1-203ENST00000393196 NPC1L1Q9UHC9 1359 aa25.56■■□□□ 1.68
NME1-203ENST00000393196 AMER1Q5JTC6 1135 aaPredicted RBP25.55■■□□□ 1.68
NME1-203ENST00000393196 INSRP06213 1382 aa25.55■■□□□ 1.68
NME1-203ENST00000393196 THSD7AQ9UPZ6 1657 aa25.55■■□□□ 1.68
NME1-203ENST00000393196 PER1O15534 1290 aaPredicted RBP25.54■■□□□ 1.68
NME1-203ENST00000393196 FBLN1P23142 703 aa25.53■■□□□ 1.68
NME1-203ENST00000393196 PDE3BQ13370 1112 aa25.52■■□□□ 1.68
NME1-203ENST00000393196 CCDC125Q86Z20 511 aa25.52■■□□□ 1.68
NME1-203ENST00000393196 ANKRD26Q9UPS8 1709 aa25.51■■□□□ 1.68
NME1-203ENST00000393196 UPF1Q92900 1129 aaKnown RBP eCLIP25.5■■□□□ 1.67
NME1-203ENST00000393196 LTV1Q96GA3 475 aaPredicted RBP25.5■■□□□ 1.67
NME1-203ENST00000393196 EMILIN1Q9Y6C2 1016 aa25.5■■□□□ 1.67
NME1-203ENST00000393196 POLKQ9UBT6 870 aa25.49■■□□□ 1.67
NME1-203ENST00000393196 FAM208AQ9UK61 1670 aaKnown RBP25.48■■□□□ 1.67
NME1-203ENST00000393196 PPM1GO15355 546 aaPredicted RBP25.48■■□□□ 1.67
NME1-203ENST00000393196 TNNT2P45379 298 aaPredicted RBP25.48■■□□□ 1.67
NME1-203ENST00000393196 DDB1Q16531 1140 aa25.48■■□□□ 1.67
NME1-203ENST00000393196 HSP90AB2PQ58FF8 381 aa25.47■■□□□ 1.67
NME1-203ENST00000393196 DISP2A7MBM2 1401 aa25.46■■□□□ 1.67
NME1-203ENST00000393196 IL2RBP14784 551 aa25.46■■□□□ 1.67
NME1-203ENST00000393196 FAM196AQ6ZSG2 479 aa25.45■■□□□ 1.66
NME1-203ENST00000393196 RGPD5Q99666 1765 aa25.45■■□□□ 1.66
NME1-203ENST00000393196 PARP4Q9UKK3 1724 aaKnown RBP25.43■■□□□ 1.66
NME1-203ENST00000393196 EXOC5O00471 708 aa25.43■■□□□ 1.66
NME1-203ENST00000393196 SF3B2Q13435 895 aaKnown RBP25.42■■□□□ 1.66
NME1-203ENST00000393196 CC2D1BQ5T0F9 858 aaKnown RBP25.42■■□□□ 1.66
NME1-203ENST00000393196 BRWD3Q6RI45 1802 aa25.4■■□□□ 1.66
NME1-203ENST00000393196 PEAK1Q9H792 1746 aa25.4■■□□□ 1.66
NME1-203ENST00000393196 TNS2Q63HR2 1409 aa25.39■■□□□ 1.66
NME1-203ENST00000393196 OVOS2A0A0G2JMS6 1433 aa25.38■■□□□ 1.65
NME1-203ENST00000393196 NBPF6Q5VWK0 638 aa25.38■■□□□ 1.65
NME1-203ENST00000393196 RAPGEF4Q8WZA2 1011 aa25.38■■□□□ 1.65
NME1-203ENST00000393196 NBPF4Q96M43 638 aa25.38■■□□□ 1.65
NME1-203ENST00000393196 LRRC37A3O60309 1634 aa25.35■■□□□ 1.65
NME1-203ENST00000393196 BCL9O00512 1426 aa25.35■■□□□ 1.65
NME1-203ENST00000393196 WNK3Q9BYP7 1800 aa25.35■■□□□ 1.65
NME1-203ENST00000393196 PLEKHG2Q9H7P9 1386 aa25.33■■□□□ 1.65
NME1-203ENST00000393196 MAP2P11137 1827 aaKnown RBP25.33■■□□□ 1.65
NME1-203ENST00000393196 TATP17735 454 aaPredicted RBP25.33■■□□□ 1.65
NME1-203ENST00000393196 EIF4A2Q14240 407 aaKnown RBP25.33■■□□□ 1.65
NME1-203ENST00000393196 EP400Q96L91 3159 aa25.32■■□□□ 1.64
NME1-203ENST00000393196 NCAPD2Q15021 1401 aa25.32■■□□□ 1.64
NME1-203ENST00000393196 MTHFSP49914 203 aa25.32■■□□□ 1.64
NME1-203ENST00000393196 FAM182BQ5T319 152 aa25.31■■□□□ 1.64
NME1-203ENST00000393196 MARCH10Q8NA82 808 aaPredicted RBP25.31■■□□□ 1.64
NME1-203ENST00000393196 ZCRB1Q8TBF4 217 aaKnown RBP25.31■■□□□ 1.64
NME1-203ENST00000393196 BAG6P46379 1132 aa25.3■■□□□ 1.64
NME1-203ENST00000393196 EYA1Q99502 592 aa25.3■■□□□ 1.64
NME1-203ENST00000393196 USHBP1Q8N6Y0 703 aa25.29■■□□□ 1.64
NME1-203ENST00000393196 IGSF1Q8N6C5 1336 aa25.28■■□□□ 1.64
NME1-203ENST00000393196 DDX10Q13206 875 aaKnown RBP25.27■■□□□ 1.64
NME1-203ENST00000393196 CFAP53Q96M91 514 aa25.27■■□□□ 1.64
NME1-203ENST00000393196 MEGF6O75095 1541 aa25.27■■□□□ 1.64
NME1-203ENST00000393196 CNGB1Q14028 1251 aaPredicted RBP25.26■■□□□ 1.63
NME1-203ENST00000393196 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.26■■□□□ 1.634e-7■□□□□ 9.1
NME1-203ENST00000393196 TRIM37O94972 964 aa25.25■■□□□ 1.63
NME1-203ENST00000393196 PCDH11XQ9BZA7 1347 aa25.24■■□□□ 1.63
NME1-203ENST00000393196 PCDH11YQ9BZA8 1340 aa25.24■■□□□ 1.63
NME1-203ENST00000393196 DDX54Q8TDD1 881 aaKnown RBP25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms