RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 CNTNAP3BQ96NU0 1288 aa4.56□□□□□ -1.68
RNU6-1228P-201ENST00000391014 OCSTAMPQ9BR26 566 aa4.56□□□□□ -1.68
RNU6-1228P-201ENST00000391014 TSEN34Q9BSV6 310 aaKnown RBP4.56□□□□□ -1.68
RNU6-1228P-201ENST00000391014 KRTAP4-6Q9BYQ5 205 aa4.56□□□□□ -1.68
RNU6-1228P-201ENST00000391014 CNTNAP3Q9BZ76 1288 aa4.56□□□□□ -1.68
RNU6-1228P-201ENST00000391014 EMILIN1Q9Y6C2 1016 aa4.56□□□□□ -1.68
RNU6-1228P-201ENST00000391014 TTLL8A6PVC2 850 aa4.55□□□□□ -1.68
RNU6-1228P-201ENST00000391014 RNFT1Q5M7Z0 435 aa4.55□□□□□ -1.68
RNU6-1228P-201ENST00000391014 NBPF14Q5TI25 921 aa4.55□□□□□ -1.68
RNU6-1228P-201ENST00000391014 Q6ZVU0 165 aa4.55□□□□□ -1.68
RNU6-1228P-201ENST00000391014 KCNMA1Q12791 1236 aa4.54□□□□□ -1.68
RNU6-1228P-201ENST00000391014 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.54□□□□□ -1.68
RNU6-1228P-201ENST00000391014 KCTD17Q8N5Z5 321 aa4.54□□□□□ -1.68
RNU6-1228P-201ENST00000391014 CCDC155Q8N6L0 562 aa4.54□□□□□ -1.68
RNU6-1228P-201ENST00000391014 HELBQ8NG08 1087 aaPredicted RBP4.54□□□□□ -1.68
RNU6-1228P-201ENST00000391014 AGBL1Q96MI9 1066 aa4.54□□□□□ -1.68
RNU6-1228P-201ENST00000391014 SLC35F4A4IF30 521 aa4.53□□□□□ -1.68
RNU6-1228P-201ENST00000391014 SPINT1O43278 529 aa4.53□□□□□ -1.68
RNU6-1228P-201ENST00000391014 CTSOP43234 321 aaPredicted RBP4.53□□□□□ -1.68
RNU6-1228P-201ENST00000391014 NR6A1Q15406 480 aa4.53□□□□□ -1.68
RNU6-1228P-201ENST00000391014 PDXDC2PQ6P474 469 aa4.53□□□□□ -1.68
RNU6-1228P-201ENST00000391014 PROCA1Q8NCQ7 364 aaPredicted RBP4.53□□□□□ -1.68
RNU6-1228P-201ENST00000391014 EPS8L1Q8TE68 723 aa4.53□□□□□ -1.68
RNU6-1228P-201ENST00000391014 WHAMMQ8TF30 809 aa4.53□□□□□ -1.68
RNU6-1228P-201ENST00000391014 NANOS1Q8WY41 292 aaKnown RBP4.53□□□□□ -1.68
RNU6-1228P-201ENST00000391014 KCTD15Q96SI1 283 aaPredicted RBP4.53□□□□□ -1.68
RNU6-1228P-201ENST00000391014 ARHGAP9Q9BRR9 750 aa4.53□□□□□ -1.68
RNU6-1228P-201ENST00000391014 COL25A1Q9BXS0 654 aaPredicted RBP4.53□□□□□ -1.68
RNU6-1228P-201ENST00000391014 SUZ12Q15022 739 aaKnown RBP4.52□□□□□ -1.69
RNU6-1228P-201ENST00000391014 INTS6LQ5JSJ4 861 aaKnown RBP4.52□□□□□ -1.69
RNU6-1228P-201ENST00000391014 ZNF385CQ66K41 422 aaPredicted RBP4.52□□□□□ -1.69
RNU6-1228P-201ENST00000391014 VWA5B2Q8N398 1253 aa4.52□□□□□ -1.69
RNU6-1228P-201ENST00000391014 GPKOWQ92917 476 aaPredicted RBP eCLIP4.52□□□□□ -1.69
RNU6-1228P-201ENST00000391014 TMPRSS4Q9NRS4 437 aa4.52□□□□□ -1.69
RNU6-1228P-201ENST00000391014 FKBPLQ9UIM3 349 aa4.52□□□□□ -1.69
RNU6-1228P-201ENST00000391014 ADAMTS8Q9UP79 889 aa4.52□□□□□ -1.69
RNU6-1228P-201ENST00000391014 ADD1P35611 737 aaKnown RBP4.51□□□□□ -1.69
RNU6-1228P-201ENST00000391014 RELBQ01201 579 aa4.51□□□□□ -1.69
RNU6-1228P-201ENST00000391014 KDF1Q8NAX2 398 aaPredicted RBP4.51□□□□□ -1.69
RNU6-1228P-201ENST00000391014 INSM2Q96T92 566 aaPredicted RBP4.51□□□□□ -1.69
RNU6-1228P-201ENST00000391014 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.51□□□□□ -1.69
RNU6-1228P-201ENST00000391014 RSPH6AQ9H0K4 717 aa4.51□□□□□ -1.69
RNU6-1228P-201ENST00000391014 ZNF395Q9H8N7 513 aaPredicted RBP4.51□□□□□ -1.69
RNU6-1228P-201ENST00000391014 PGPEP1Q9NXJ5 209 aa4.51□□□□□ -1.69
RNU6-1228P-201ENST00000391014 RASSF7Q02833 373 aa4.5□□□□□ -1.69
RNU6-1228P-201ENST00000391014 SKIV2LQ15477 1246 aaKnown RBP4.5□□□□□ -1.69
RNU6-1228P-201ENST00000391014 ZBTB33Q86T24 672 aa4.5□□□□□ -1.69
RNU6-1228P-201ENST00000391014 ADAM32Q8TC27 787 aa4.5□□□□□ -1.69
RNU6-1228P-201ENST00000391014 SENP3-EIF4A1A0A087X0R7 540 aa4.49□□□□□ -1.69
RNU6-1228P-201ENST00000391014 LILRA1O75019 489 aa4.49□□□□□ -1.69
RNU6-1228P-201ENST00000391014 ARHGEF15O94989 841 aa4.49□□□□□ -1.69
RNU6-1228P-201ENST00000391014 ITGA6P23229 1130 aa4.49□□□□□ -1.69
RNU6-1228P-201ENST00000391014 RNF217Q8TC41 542 aa4.49□□□□□ -1.69
RNU6-1228P-201ENST00000391014 SLC10A4Q96EP9 437 aa4.49□□□□□ -1.69
RNU6-1228P-201ENST00000391014 FAM117AQ9C073 453 aa4.49□□□□□ -1.69
RNU6-1228P-201ENST00000391014 GPBP1L1Q9HC44 474 aaPredicted RBP4.49□□□□□ -1.69
RNU6-1228P-201ENST00000391014 HMX1Q9NP08 348 aaPredicted RBP4.49□□□□□ -1.69
RNU6-1228P-201ENST00000391014 CUEDC1Q9NWM3 386 aaPredicted RBP4.49□□□□□ -1.69
RNU6-1228P-201ENST00000391014 GDF11O95390 407 aa4.48□□□□□ -1.69
RNU6-1228P-201ENST00000391014 SLURP2P0DP57 97 aa4.48□□□□□ -1.69
RNU6-1228P-201ENST00000391014 RAB15P59190 212 aa4.48□□□□□ -1.69
RNU6-1228P-201ENST00000391014 FOXD4L5Q5VV16 416 aaPredicted RBP4.48□□□□□ -1.69
RNU6-1228P-201ENST00000391014 PPP2R2DQ66LE6 453 aa4.48□□□□□ -1.69
RNU6-1228P-201ENST00000391014 TMEM151AQ8N4L1 468 aa4.48□□□□□ -1.69
RNU6-1228P-201ENST00000391014 ZNF784Q8NCA9 323 aaPredicted RBP4.48□□□□□ -1.69
RNU6-1228P-201ENST00000391014 POLMQ9NP87 494 aaPredicted RBP4.48□□□□□ -1.69
RNU6-1228P-201ENST00000391014 CDC14CA4D256 554 aa4.47□□□□□ -1.69
RNU6-1228P-201ENST00000391014 ERVH48-1M5A8F1 160 aa4.47□□□□□ -1.69
RNU6-1228P-201ENST00000391014 AP1G2O75843 785 aa4.47□□□□□ -1.69
RNU6-1228P-201ENST00000391014 PTK2Q05397 1052 aa4.47□□□□□ -1.69
RNU6-1228P-201ENST00000391014 DHX9Q08211 1270 aaKnown RBP4.47□□□□□ -1.69
RNU6-1228P-201ENST00000391014 SH3D19Q5HYK7 790 aa4.47□□□□□ -1.69
RNU6-1228P-201ENST00000391014 LYPD4Q6UWN0 246 aa4.47□□□□□ -1.69
RNU6-1228P-201ENST00000391014 SV2AQ7L0J3 742 aa4.47□□□□□ -1.69
RNU6-1228P-201ENST00000391014 SVOPQ8N4V2 548 aa4.47□□□□□ -1.69
RNU6-1228P-201ENST00000391014 CDV3Q9UKY7 258 aaKnown RBP4.47□□□□□ -1.69
RNU6-1228P-201ENST00000391014 KDM4CQ9H3R0 1056 aa4.46□□□□□ -1.7
RNU6-1228P-201ENST00000391014 ZC3H4Q9UPT8 1303 aaKnown RBP4.46□□□□□ -1.7
RNU6-1228P-201ENST00000391014 ESPNB1AK53 854 aa4.45□□□□□ -1.7
RNU6-1228P-201ENST00000391014 ADH1AP07327 375 aa4.45□□□□□ -1.7
RNU6-1228P-201ENST00000391014 PTGIRP43119 386 aa4.45□□□□□ -1.7
RNU6-1228P-201ENST00000391014 GAS6Q14393 721 aa4.45□□□□□ -1.7
RNU6-1228P-201ENST00000391014 GPSM3Q9Y4H4 160 aa4.45□□□□□ -1.7
RNU6-1228P-201ENST00000391014 ADAMTS2O95450 1211 aa4.44□□□□□ -1.7
RNU6-1228P-201ENST00000391014 RHOQP17081 205 aa4.44□□□□□ -1.7
RNU6-1228P-201ENST00000391014 IRS1P35568 1242 aa4.44□□□□□ -1.7
RNU6-1228P-201ENST00000391014 PRICKLE2Q7Z3G6 844 aa4.44□□□□□ -1.7
RNU6-1228P-201ENST00000391014 TRIM34Q9BYJ4 488 aa4.44□□□□□ -1.7
RNU6-1228P-201ENST00000391014 ATP1B4Q9UN42 357 aaPredicted RBP4.44□□□□□ -1.7
RNU6-1228P-201ENST00000391014 GIGYF1O75420 1035 aaPredicted RBP4.43□□□□□ -1.7
RNU6-1228P-201ENST00000391014 USP17L8P0C7I0 530 aa4.43□□□□□ -1.7
RNU6-1228P-201ENST00000391014 NBPF20Q3BBV1 942 aa4.43□□□□□ -1.7
RNU6-1228P-201ENST00000391014 LYSMD3Q7Z3D4 306 aa4.43□□□□□ -1.7
RNU6-1228P-201ENST00000391014 DZIP3Q86Y13 1208 aaKnown RBP4.43□□□□□ -1.7
RNU6-1228P-201ENST00000391014 CYLDQ9NQC7 956 aa4.43□□□□□ -1.7
RNU6-1228P-201ENST00000391014 GPR25O00155 361 aa4.42□□□□□ -1.7
RNU6-1228P-201ENST00000391014 CELA2BP08218 269 aaPredicted RBP4.42□□□□□ -1.7
RNU6-1228P-201ENST00000391014 RFC5P40937 340 aa4.42□□□□□ -1.7
RNU6-1228P-201ENST00000391014 RNF144AP50876 292 aaPredicted RBP4.42□□□□□ -1.7
RNU6-1228P-201ENST00000391014 SRSF11Q05519 484 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms