RNA–Protein interactions for RNA: ENST00000390446.3

TRAV18-201, Transcript of T cell receptor alpha variable 18, humanhuman

APPRIS P1 BASIC

Gene TRAV18, Length 440 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18-201ENST00000390446 ADGRB1O14514 1584 aa14.22□□□□□ -0.13
TRAV18-201ENST00000390446 COL5A2P05997 1499 aaPredicted RBP14.21□□□□□ -0.13
TRAV18-201ENST00000390446 PARP4Q9UKK3 1724 aaKnown RBP14.21□□□□□ -0.14
TRAV18-201ENST00000390446 POLR3AO14802 1390 aaPredicted RBP14.21□□□□□ -0.14
TRAV18-201ENST00000390446 USP19O94966 1318 aa14.2□□□□□ -0.14
TRAV18-201ENST00000390446 SOX12O15370 315 aa14.19□□□□□ -0.14
TRAV18-201ENST00000390446 STAC3Q96MF2 364 aa14.19□□□□□ -0.14
TRAV18-201ENST00000390446 CASZ1Q86V15 1759 aa14.19□□□□□ -0.14
TRAV18-201ENST00000390446 POLD1P28340 1107 aa14.17□□□□□ -0.14
TRAV18-201ENST00000390446 ACSBG1Q96GR2 724 aa14.17□□□□□ -0.14
TRAV18-201ENST00000390446 AATKQ6ZMQ8 1374 aa14.17□□□□□ -0.14
TRAV18-201ENST00000390446 LMO7Q8WWI1 1683 aa14.17□□□□□ -0.14
TRAV18-201ENST00000390446 RGPD3A6NKT7 1758 aaPredicted RBP14.17□□□□□ -0.14
TRAV18-201ENST00000390446 RGPD4Q7Z3J3 1758 aa14.17□□□□□ -0.14
TRAV18-201ENST00000390446 WDR17Q8IZU2 1322 aa14.16□□□□□ -0.14
TRAV18-201ENST00000390446 CABP2Q9NPB3 220 aa14.16□□□□□ -0.14
TRAV18-201ENST00000390446 PPIP5K1Q6PFW1 1433 aa14.15□□□□□ -0.14
TRAV18-201ENST00000390446 CHD4Q14839 1912 aa14.15□□□□□ -0.14
TRAV18-201ENST00000390446 SBF2Q86WG5 1849 aa14.14□□□□□ -0.15
TRAV18-201ENST00000390446 SGIP1Q9BQI5 828 aa14.14□□□□□ -0.15
TRAV18-201ENST00000390446 AXIN2Q9Y2T1 843 aa14.14□□□□□ -0.15
TRAV18-201ENST00000390446 PEAK1Q9H792 1746 aa14.14□□□□□ -0.15
TRAV18-201ENST00000390446 LRRC37A3O60309 1634 aa14.14□□□□□ -0.15
TRAV18-201ENST00000390446 CARD10Q9BWT7 1032 aa14.13□□□□□ -0.15
TRAV18-201ENST00000390446 CABP1Q9NZU7 370 aa14.13□□□□□ -0.15
TRAV18-201ENST00000390446 KCNH5Q8NCM2 988 aa14.12□□□□□ -0.15
TRAV18-201ENST00000390446 BRD4O60885 1362 aaPredicted RBP14.11□□□□□ -0.15
TRAV18-201ENST00000390446 MSH5O43196 834 aa14.11□□□□□ -0.15
TRAV18-201ENST00000390446 ARHGEF28Q8N1W1 1705 aaKnown RBP14.11□□□□□ -0.15
TRAV18-201ENST00000390446 AKAP12Q02952 1782 aa14.1□□□□□ -0.15
TRAV18-201ENST00000390446 GRIN3BO60391 1043 aa14.1□□□□□ -0.15
TRAV18-201ENST00000390446 NLRP2Q9NX02 1062 aa14.1□□□□□ -0.15
TRAV18-201ENST00000390446 TFCP2L1Q9NZI6 479 aa14.1□□□□□ -0.15
TRAV18-201ENST00000390446 BCL9O00512 1426 aa14.09□□□□□ -0.15
TRAV18-201ENST00000390446 SLC16A10Q8TF71 515 aa14.09□□□□□ -0.15
TRAV18-201ENST00000390446 CENPJQ9HC77 1338 aaPredicted RBP14.09□□□□□ -0.15
TRAV18-201ENST00000390446 MAP3K5Q99683 1374 aa14.09□□□□□ -0.15
TRAV18-201ENST00000390446 TOPAZ1Q8N9V7 1692 aa14.08□□□□□ -0.16
TRAV18-201ENST00000390446 ARHGEF25Q86VW2 580 aa14.08□□□□□ -0.16
TRAV18-201ENST00000390446 CCDC7Q96M83 1385 aa14.08□□□□□ -0.16
TRAV18-201ENST00000390446 ZNF827Q17R98 1081 aa14.07□□□□□ -0.16
TRAV18-201ENST00000390446 GPBP1L1Q9HC44 474 aaPredicted RBP14.07□□□□□ -0.16
TRAV18-201ENST00000390446 USP6P35125 1406 aa14.07□□□□□ -0.16
TRAV18-201ENST00000390446 CPSF1Q10570 1443 aaKnown RBP14.07□□□□□ -0.16
TRAV18-201ENST00000390446 IL2RBP14784 551 aa14.05□□□□□ -0.16
TRAV18-201ENST00000390446 NBPF1Q3BBV0 1214 aa14.05□□□□□ -0.16
TRAV18-201ENST00000390446 NLGN2Q8NFZ4 835 aa14.05□□□□□ -0.16
TRAV18-201ENST00000390446 ZNF526Q8TF50 670 aaPredicted RBP14.05□□□□□ -0.16
TRAV18-201ENST00000390446 SYTL4Q96C24 671 aaPredicted RBP14.05□□□□□ -0.16
TRAV18-201ENST00000390446 ZNF692Q9BU19 519 aaPredicted RBP14.05□□□□□ -0.16
TRAV18-201ENST00000390446 RAB3GAP2Q9H2M9 1393 aa14.05□□□□□ -0.16
TRAV18-201ENST00000390446 DDX54Q8TDD1 881 aaKnown RBP14.04□□□□□ -0.16
TRAV18-201ENST00000390446 SLIT3O75094 1523 aa14.04□□□□□ -0.16
TRAV18-201ENST00000390446 SLC27A3Q5K4L6 730 aa14.03□□□□□ -0.16
TRAV18-201ENST00000390446 LRRC4BQ9NT99 713 aa14.03□□□□□ -0.16
TRAV18-201ENST00000390446 TTC21BQ7Z4L5 1316 aa14.03□□□□□ -0.16
TRAV18-201ENST00000390446 EVC2Q86UK5 1308 aa14.03□□□□□ -0.16
TRAV18-201ENST00000390446 TNS2Q63HR2 1409 aa14.03□□□□□ -0.16
TRAV18-201ENST00000390446 WNK3Q9BYP7 1800 aa14.01□□□□□ -0.17
TRAV18-201ENST00000390446 YBX3P16989 372 aaKnown RBP eCLIP14.01□□□□□ -0.17
TRAV18-201ENST00000390446 HSPA6P17066 643 aa14.01□□□□□ -0.17
TRAV18-201ENST00000390446 KCNQ4P56696 695 aa14.01□□□□□ -0.17
TRAV18-201ENST00000390446 AKT1S1Q96B36 256 aa14.01□□□□□ -0.17
TRAV18-201ENST00000390446 ATP10DQ9P241 1426 aa14□□□□□ -0.17
TRAV18-201ENST00000390446 PNPLA7Q6ZV29 1317 aa14□□□□□ -0.17
TRAV18-201ENST00000390446 TTC21AQ8NDW8 1320 aa14□□□□□ -0.17
TRAV18-201ENST00000390446 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14□□□□□ -0.17
TRAV18-201ENST00000390446 COL18A1P39060 1754 aa14□□□□□ -0.17
TRAV18-201ENST00000390446 KAT6BQ8WYB5 2073 aa13.99□□□□□ -0.17
TRAV18-201ENST00000390446 NHSQ6T4R5 1651 aa13.99□□□□□ -0.17
TRAV18-201ENST00000390446 RGPD5Q99666 1765 aa13.99□□□□□ -0.17
TRAV18-201ENST00000390446 MSL1Q68DK7 614 aa13.98□□□□□ -0.17
TRAV18-201ENST00000390446 ANKRD24Q8TF21 1146 aa13.98□□□□□ -0.17
TRAV18-201ENST00000390446 KTN1Q86UP2 1357 aaKnown RBP13.97□□□□□ -0.17
TRAV18-201ENST00000390446 PIK3C2AO00443 1686 aa13.97□□□□□ -0.17
TRAV18-201ENST00000390446 SHANK3Q9BYB0 1731 aa13.96□□□□□ -0.17
TRAV18-201ENST00000390446 QRICH2Q9H0J4 1663 aa13.96□□□□□ -0.17
TRAV18-201ENST00000390446 PRIM1P49642 420 aaKnown RBP13.96□□□□□ -0.17
TRAV18-201ENST00000390446 LTV1Q96GA3 475 aaPredicted RBP13.96□□□□□ -0.17
TRAV18-201ENST00000390446 CCNL1Q9UK58 526 aaPredicted RBP13.96□□□□□ -0.17
TRAV18-201ENST00000390446 ERBB3P21860 1342 aa13.95□□□□□ -0.18
TRAV18-201ENST00000390446 BTAF1O14981 1849 aa13.95□□□□□ -0.18
TRAV18-201ENST00000390446 ABCC6O95255 1503 aa13.95□□□□□ -0.18
TRAV18-201ENST00000390446 PAPPAQ13219 1627 aa13.94□□□□□ -0.18
TRAV18-201ENST00000390446 TRPM1Q7Z4N2 1603 aa13.94□□□□□ -0.18
TRAV18-201ENST00000390446 WWC3Q9ULE0 1092 aa13.94□□□□□ -0.18
TRAV18-201ENST00000390446 COL23A1Q86Y22 540 aaPredicted RBP13.93□□□□□ -0.18
TRAV18-201ENST00000390446 KIAA1210Q9ULL0 1709 aa13.93□□□□□ -0.18
TRAV18-201ENST00000390446 TMC1Q8TDI8 760 aa13.92□□□□□ -0.18
TRAV18-201ENST00000390446 CD2APQ9Y5K6 639 aa13.92□□□□□ -0.18
TRAV18-201ENST00000390446 HMGB2P26583 209 aaKnown RBP13.91□□□□□ -0.18
TRAV18-201ENST00000390446 NME9Q86XW9 330 aa13.91□□□□□ -0.18
TRAV18-201ENST00000390446 APLP1P51693 650 aa13.9□□□□□ -0.18
TRAV18-201ENST00000390446 HDGFL2Q7Z4V5 671 aaPredicted RBP13.9□□□□□ -0.18
TRAV18-201ENST00000390446 USP47Q96K76 1375 aa13.9□□□□□ -0.18
TRAV18-201ENST00000390446 CAPN15O75808 1086 aa13.89□□□□□ -0.19
TRAV18-201ENST00000390446 FLAD1Q8NFF5 587 aa13.89□□□□□ -0.19
TRAV18-201ENST00000390446 ZCRB1Q8TBF4 217 aaKnown RBP13.89□□□□□ -0.19
TRAV18-201ENST00000390446 NFAT5O94916 1531 aa13.89□□□□□ -0.19
TRAV18-201ENST00000390446 ANKRD36BQ8N2N9 1353 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms