RNA–Protein interactions for RNA: ENST00000390394.3

TRBV20-1-201, Transcript of T cell receptor beta variable 20-1, humanhuman

APPRIS P1 BASIC

Gene TRBV20-1, Length 413 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1-201ENST00000390394 BLMP54132 1417 aaPredicted RBP13.03□□□□□ -0.32
TRBV20-1-201ENST00000390394 PPM1GO15355 546 aaPredicted RBP13.02□□□□□ -0.33
TRBV20-1-201ENST00000390394 EVA1CP58658 441 aa13.02□□□□□ -0.33
TRBV20-1-201ENST00000390394 RRS1Q15050 365 aaKnown RBP13.02□□□□□ -0.33
TRBV20-1-201ENST00000390394 POLKQ9UBT6 870 aa13.02□□□□□ -0.33
TRBV20-1-201ENST00000390394 SMG6Q86US8 1419 aaKnown RBP13.02□□□□□ -0.33
TRBV20-1-201ENST00000390394 MARF1Q9Y4F3 1742 aaKnown RBP13.02□□□□□ -0.33
TRBV20-1-201ENST00000390394 COL14A1Q05707 1796 aaKnown RBP13.02□□□□□ -0.33
TRBV20-1-201ENST00000390394 FAM83GA6ND36 823 aa13.01□□□□□ -0.33
TRBV20-1-201ENST00000390394 PPP2R1AP30153 589 aa13.01□□□□□ -0.33
TRBV20-1-201ENST00000390394 FNBP4Q8N3X1 1017 aaPredicted RBP13.01□□□□□ -0.33
TRBV20-1-201ENST00000390394 HOXC9P31274 260 aa13□□□□□ -0.33
TRBV20-1-201ENST00000390394 MTHFSP49914 203 aa13□□□□□ -0.33
TRBV20-1-201ENST00000390394 CHRNA2Q15822 529 aa13□□□□□ -0.33
TRBV20-1-201ENST00000390394 BTG4Q9NY30 223 aa13□□□□□ -0.33
TRBV20-1-201ENST00000390394 EMILIN1Q9Y6C2 1016 aa13□□□□□ -0.33
TRBV20-1-201ENST00000390394 INSRP06213 1382 aa12.99□□□□□ -0.33
TRBV20-1-201ENST00000390394 USP21Q9UK80 565 aa12.99□□□□□ -0.33
TRBV20-1-201ENST00000390394 NUDCQ9Y266 331 aa12.99□□□□□ -0.33
TRBV20-1-201ENST00000390394 MAP2P11137 1827 aaKnown RBP12.99□□□□□ -0.33
TRBV20-1-201ENST00000390394 CSB-PGBD3P0DP91 1061 aa12.98□□□□□ -0.33
TRBV20-1-201ENST00000390394 UNC5CLQ8IV45 518 aa12.98□□□□□ -0.33
TRBV20-1-201ENST00000390394 LTN1O94822 1766 aa12.98□□□□□ -0.33
TRBV20-1-201ENST00000390394 SLIT2O94813 1529 aa12.98□□□□□ -0.33
TRBV20-1-201ENST00000390394 NWD2Q9ULI1 1742 aa12.97□□□□□ -0.33
TRBV20-1-201ENST00000390394 EP400Q96L91 3159 aa12.97□□□□□ -0.33
TRBV20-1-201ENST00000390394 FBLN1P23142 703 aa12.97□□□□□ -0.33
TRBV20-1-201ENST00000390394 TRPC5Q9UL62 973 aaPredicted RBP12.97□□□□□ -0.33
TRBV20-1-201ENST00000390394 ERBB3P21860 1342 aa12.96□□□□□ -0.33
TRBV20-1-201ENST00000390394 AFF2P51816 1311 aa12.96□□□□□ -0.33
TRBV20-1-201ENST00000390394 DIAPH1O60610 1272 aaKnown RBP12.96□□□□□ -0.33
TRBV20-1-201ENST00000390394 ANKRD24Q8TF21 1146 aa12.96□□□□□ -0.33
TRBV20-1-201ENST00000390394 STRN4Q9NRL3 753 aa12.96□□□□□ -0.33
TRBV20-1-201ENST00000390394 WDR17Q8IZU2 1322 aa12.95□□□□□ -0.34
TRBV20-1-201ENST00000390394 VPS72Q15906 364 aa12.95□□□□□ -0.34
TRBV20-1-201ENST00000390394 HSP90AB2PQ58FF8 381 aa12.95□□□□□ -0.34
TRBV20-1-201ENST00000390394 TOM1L2Q6ZVM7 507 aa12.95□□□□□ -0.34
TRBV20-1-201ENST00000390394 AXIN2Q9Y2T1 843 aa12.95□□□□□ -0.34
TRBV20-1-201ENST00000390394 LMO7Q8WWI1 1683 aa12.95□□□□□ -0.34
TRBV20-1-201ENST00000390394 RGS12O14924 1447 aa12.95□□□□□ -0.34
TRBV20-1-201ENST00000390394 CAMTA1Q9Y6Y1 1673 aa12.94□□□□□ -0.34
TRBV20-1-201ENST00000390394 COL5A2P05997 1499 aaPredicted RBP12.94□□□□□ -0.34
TRBV20-1-201ENST00000390394 RBM6P78332 1123 aaKnown RBP12.94□□□□□ -0.34
TRBV20-1-201ENST00000390394 THRAP3Q9Y2W1 955 aaKnown RBP12.94□□□□□ -0.34
TRBV20-1-201ENST00000390394 CCDC9Q9Y3X0 531 aaKnown RBP12.94□□□□□ -0.34
TRBV20-1-201ENST00000390394 COL18A1P39060 1754 aa12.94□□□□□ -0.34
TRBV20-1-201ENST00000390394 PLCH1Q4KWH8 1693 aa12.93□□□□□ -0.34
TRBV20-1-201ENST00000390394 LTV1Q96GA3 475 aaPredicted RBP12.93□□□□□ -0.34
TRBV20-1-201ENST00000390394 CDCA7Q9BWT1 371 aaPredicted RBP12.93□□□□□ -0.34
TRBV20-1-201ENST00000390394 CARD10Q9BWT7 1032 aa12.93□□□□□ -0.34
TRBV20-1-201ENST00000390394 PNNQ9H307 717 aaKnown RBP12.93□□□□□ -0.34
TRBV20-1-201ENST00000390394 NLRP2Q9NX02 1062 aa12.93□□□□□ -0.34
TRBV20-1-201ENST00000390394 CRB1P82279 1406 aa12.93□□□□□ -0.34
TRBV20-1-201ENST00000390394 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.93□□□□□ -0.34
TRBV20-1-201ENST00000390394 BCL9LQ86UU0 1499 aa12.92□□□□□ -0.34
TRBV20-1-201ENST00000390394 CCER2I3L3R5 266 aa12.92□□□□□ -0.34
TRBV20-1-201ENST00000390394 EIF4A2Q14240 407 aaKnown RBP12.92□□□□□ -0.34
TRBV20-1-201ENST00000390394 QTRT2Q9H974 415 aaKnown RBP12.92□□□□□ -0.34
TRBV20-1-201ENST00000390394 FAM208AQ9UK61 1670 aaKnown RBP12.92□□□□□ -0.34
TRBV20-1-201ENST00000390394 NEFMP07197 916 aa12.91□□□□□ -0.34
TRBV20-1-201ENST00000390394 WDR43Q15061 677 aaKnown RBP eCLIP12.91□□□□□ -0.34
TRBV20-1-201ENST00000390394 PEAK1Q9H792 1746 aa12.91□□□□□ -0.34
TRBV20-1-201ENST00000390394 IL13P35225 146 aa12.9□□□□□ -0.34
TRBV20-1-201ENST00000390394 LARP1Q6PKG0 1096 aaKnown RBP12.9□□□□□ -0.34
TRBV20-1-201ENST00000390394 TCP11L2Q8N4U5 519 aa12.9□□□□□ -0.34
TRBV20-1-201ENST00000390394 GJD4Q96KN9 370 aaPredicted RBP12.9□□□□□ -0.34
TRBV20-1-201ENST00000390394 MRS2Q9HD23 443 aa12.9□□□□□ -0.34
TRBV20-1-201ENST00000390394 PLEKHG2Q9H7P9 1386 aa12.9□□□□□ -0.34
TRBV20-1-201ENST00000390394 SPATA31A1Q5TZJ5 1347 aa12.89□□□□□ -0.35
TRBV20-1-201ENST00000390394 SPATA31A5Q5VU36 1347 aa12.89□□□□□ -0.35
TRBV20-1-201ENST00000390394 SPATA31A7Q8IWB4 1347 aa12.89□□□□□ -0.35
TRBV20-1-201ENST00000390394 U2SURPO15042 1029 aaKnown RBP12.89□□□□□ -0.35
TRBV20-1-201ENST00000390394 RAPGEF4Q8WZA2 1011 aa12.89□□□□□ -0.35
TRBV20-1-201ENST00000390394 IGSF1Q8N6C5 1336 aa12.88□□□□□ -0.35
TRBV20-1-201ENST00000390394 ATRNO75882 1429 aa12.88□□□□□ -0.35
TRBV20-1-201ENST00000390394 NRAPQ86VF7 1730 aa12.88□□□□□ -0.35
TRBV20-1-201ENST00000390394 BARGINQ6ZT62 677 aa12.88□□□□□ -0.35
TRBV20-1-201ENST00000390394 EYA1Q99502 592 aa12.88□□□□□ -0.35
TRBV20-1-201ENST00000390394 RGPD5Q99666 1765 aa12.87□□□□□ -0.35
TRBV20-1-201ENST00000390394 COL3A1P02461 1466 aaPredicted RBP12.87□□□□□ -0.35
TRBV20-1-201ENST00000390394 FCHSD2O94868 740 aa12.87□□□□□ -0.35
TRBV20-1-201ENST00000390394 U2AF1L5P0DN76 240 aaPredicted RBP12.87□□□□□ -0.35
TRBV20-1-201ENST00000390394 IL2RBP14784 551 aa12.87□□□□□ -0.35
TRBV20-1-201ENST00000390394 TATP17735 454 aaPredicted RBP12.87□□□□□ -0.35
TRBV20-1-201ENST00000390394 U2AF1Q01081 240 aaKnown RBP eCLIP12.87□□□□□ -0.35
TRBV20-1-201ENST00000390394 NBPF6Q5VWK0 638 aa12.87□□□□□ -0.35
TRBV20-1-201ENST00000390394 NBPF4Q96M43 638 aa12.87□□□□□ -0.35
TRBV20-1-201ENST00000390394 USP35Q9P2H5 1018 aa12.87□□□□□ -0.35
TRBV20-1-201ENST00000390394 SULT6B1Q6IMI4 303 aa12.85□□□□□ -0.35
TRBV20-1-201ENST00000390394 CCDC125Q86Z20 511 aa12.85□□□□□ -0.35
TRBV20-1-201ENST00000390394 KDRP35968 1356 aa12.84□□□□□ -0.35
TRBV20-1-201ENST00000390394 A0A0G2JS52 829 aa12.84□□□□□ -0.35
TRBV20-1-201ENST00000390394 MYT1Q01538 1121 aa12.84□□□□□ -0.35
TRBV20-1-201ENST00000390394 AMOTQ4VCS5 1084 aa12.84□□□□□ -0.35
TRBV20-1-201ENST00000390394 MIER1Q8N108 512 aa12.84□□□□□ -0.35
TRBV20-1-201ENST00000390394 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRBV20-1-201ENST00000390394 NCAPD2Q15021 1401 aa12.84□□□□□ -0.35
TRBV20-1-201ENST00000390394 LRP5O75197 1615 aa12.84□□□□□ -0.35
TRBV20-1-201ENST00000390394 EXOC5O00471 708 aa12.83□□□□□ -0.36
TRBV20-1-201ENST00000390394 ONECUT3O60422 494 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms