RNA–Protein interactions for RNA: ENST00000390375.2

TRBV5-6-201, Transcript of T cell receptor beta variable 5-6, humanhuman

APPRIS P1 BASIC

Gene TRBV5-6, Length 384 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-6-201ENST00000390375 MTHFSP49914 203 aa14□□□□□ -0.17
TRBV5-6-201ENST00000390375 NGLY1Q96IV0 654 aa14□□□□□ -0.17
TRBV5-6-201ENST00000390375 EMILIN1Q9Y6C2 1016 aa14□□□□□ -0.17
TRBV5-6-201ENST00000390375 NWD2Q9ULI1 1742 aa14□□□□□ -0.17
TRBV5-6-201ENST00000390375 LRP6O75581 1613 aa14□□□□□ -0.17
TRBV5-6-201ENST00000390375 FAM83GA6ND36 823 aa13.99□□□□□ -0.17
TRBV5-6-201ENST00000390375 FNBP4Q8N3X1 1017 aaPredicted RBP13.99□□□□□ -0.17
TRBV5-6-201ENST00000390375 C8orf37Q96NL8 207 aa13.99□□□□□ -0.17
TRBV5-6-201ENST00000390375 LMO7Q8WWI1 1683 aa13.98□□□□□ -0.17
TRBV5-6-201ENST00000390375 NUDCQ9Y266 331 aa13.98□□□□□ -0.17
TRBV5-6-201ENST00000390375 SLIT2O94813 1529 aa13.98□□□□□ -0.17
TRBV5-6-201ENST00000390375 EVA1CP58658 441 aa13.97□□□□□ -0.17
TRBV5-6-201ENST00000390375 CHRNA2Q15822 529 aa13.97□□□□□ -0.17
TRBV5-6-201ENST00000390375 BTG4Q9NY30 223 aa13.97□□□□□ -0.17
TRBV5-6-201ENST00000390375 COL18A1P39060 1754 aa13.96□□□□□ -0.17
TRBV5-6-201ENST00000390375 ERBB3P21860 1342 aa13.96□□□□□ -0.17
TRBV5-6-201ENST00000390375 FAM208AQ9UK61 1670 aaKnown RBP13.96□□□□□ -0.17
TRBV5-6-201ENST00000390375 COL5A2P05997 1499 aaPredicted RBP13.96□□□□□ -0.17
TRBV5-6-201ENST00000390375 DIAPH1O60610 1272 aaKnown RBP13.96□□□□□ -0.17
TRBV5-6-201ENST00000390375 CSB-PGBD3P0DP91 1061 aa13.96□□□□□ -0.17
TRBV5-6-201ENST00000390375 FBLN1P23142 703 aa13.96□□□□□ -0.17
TRBV5-6-201ENST00000390375 ZNF772Q68DY9 489 aaPredicted RBP13.96□□□□□ -0.17
TRBV5-6-201ENST00000390375 UNC5CLQ8IV45 518 aa13.96□□□□□ -0.17
TRBV5-6-201ENST00000390375 PLCH1Q4KWH8 1693 aa13.95□□□□□ -0.18
TRBV5-6-201ENST00000390375 CCER2I3L3R5 266 aa13.95□□□□□ -0.18
TRBV5-6-201ENST00000390375 HSP90AB2PQ58FF8 381 aa13.95□□□□□ -0.18
TRBV5-6-201ENST00000390375 ANKRD24Q8TF21 1146 aa13.95□□□□□ -0.18
TRBV5-6-201ENST00000390375 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.95□□□□□ -0.18
TRBV5-6-201ENST00000390375 WDR17Q8IZU2 1322 aa13.94□□□□□ -0.18
TRBV5-6-201ENST00000390375 PEAK1Q9H792 1746 aa13.94□□□□□ -0.18
TRBV5-6-201ENST00000390375 USP21Q9UK80 565 aa13.94□□□□□ -0.18
TRBV5-6-201ENST00000390375 AXIN2Q9Y2T1 843 aa13.94□□□□□ -0.18
TRBV5-6-201ENST00000390375 CAMTA1Q9Y6Y1 1673 aa13.94□□□□□ -0.18
TRBV5-6-201ENST00000390375 AFF2P51816 1311 aa13.93□□□□□ -0.18
TRBV5-6-201ENST00000390375 PHF23Q9BUL5 403 aaPredicted RBP13.93□□□□□ -0.18
TRBV5-6-201ENST00000390375 TRPC5Q9UL62 973 aaPredicted RBP13.93□□□□□ -0.18
TRBV5-6-201ENST00000390375 CRB1P82279 1406 aa13.92□□□□□ -0.18
TRBV5-6-201ENST00000390375 EIF4A2Q14240 407 aaKnown RBP13.92□□□□□ -0.18
TRBV5-6-201ENST00000390375 TOM1L2Q6ZVM7 507 aa13.92□□□□□ -0.18
TRBV5-6-201ENST00000390375 PNNQ9H307 717 aaKnown RBP13.92□□□□□ -0.18
TRBV5-6-201ENST00000390375 STRN4Q9NRL3 753 aa13.92□□□□□ -0.18
TRBV5-6-201ENST00000390375 THRAP3Q9Y2W1 955 aaKnown RBP13.92□□□□□ -0.18
TRBV5-6-201ENST00000390375 PLEKHG2Q9H7P9 1386 aa13.92□□□□□ -0.18
TRBV5-6-201ENST00000390375 NRAPQ86VF7 1730 aa13.92□□□□□ -0.18
TRBV5-6-201ENST00000390375 BCL9LQ86UU0 1499 aa13.92□□□□□ -0.18
TRBV5-6-201ENST00000390375 IL13P35225 146 aa13.91□□□□□ -0.18
TRBV5-6-201ENST00000390375 VPS72Q15906 364 aa13.91□□□□□ -0.18
TRBV5-6-201ENST00000390375 CARD10Q9BWT7 1032 aa13.91□□□□□ -0.18
TRBV5-6-201ENST00000390375 MRS2Q9HD23 443 aa13.91□□□□□ -0.18
TRBV5-6-201ENST00000390375 COL3A1P02461 1466 aaPredicted RBP13.91□□□□□ -0.18
TRBV5-6-201ENST00000390375 WDR43Q15061 677 aaKnown RBP eCLIP13.9□□□□□ -0.18
TRBV5-6-201ENST00000390375 LTV1Q96GA3 475 aaPredicted RBP13.9□□□□□ -0.18
TRBV5-6-201ENST00000390375 CDCA7Q9BWT1 371 aaPredicted RBP13.9□□□□□ -0.18
TRBV5-6-201ENST00000390375 NLRP2Q9NX02 1062 aa13.9□□□□□ -0.18
TRBV5-6-201ENST00000390375 RGPD5Q99666 1765 aa13.89□□□□□ -0.19
TRBV5-6-201ENST00000390375 IGSF1Q8N6C5 1336 aa13.89□□□□□ -0.19
TRBV5-6-201ENST00000390375 NEFMP07197 916 aa13.88□□□□□ -0.19
TRBV5-6-201ENST00000390375 LARP1Q6PKG0 1096 aaKnown RBP13.88□□□□□ -0.19
TRBV5-6-201ENST00000390375 TCP11L2Q8N4U5 519 aa13.88□□□□□ -0.19
TRBV5-6-201ENST00000390375 CCDC9Q9Y3X0 531 aaKnown RBP13.88□□□□□ -0.19
TRBV5-6-201ENST00000390375 ATRNO75882 1429 aa13.88□□□□□ -0.19
TRBV5-6-201ENST00000390375 SPATA31A5Q5VU36 1347 aa13.88□□□□□ -0.19
TRBV5-6-201ENST00000390375 SPATA31A7Q8IWB4 1347 aa13.88□□□□□ -0.19
TRBV5-6-201ENST00000390375 U2SURPO15042 1029 aaKnown RBP13.87□□□□□ -0.19
TRBV5-6-201ENST00000390375 EYA1Q99502 592 aa13.87□□□□□ -0.19
TRBV5-6-201ENST00000390375 QTRT2Q9H974 415 aaKnown RBP13.87□□□□□ -0.19
TRBV5-6-201ENST00000390375 NCAPD2Q15021 1401 aa13.87□□□□□ -0.19
TRBV5-6-201ENST00000390375 SPATA31A1Q5TZJ5 1347 aa13.87□□□□□ -0.19
TRBV5-6-201ENST00000390375 KDRP35968 1356 aa13.86□□□□□ -0.19
TRBV5-6-201ENST00000390375 FCHSD2O94868 740 aa13.86□□□□□ -0.19
TRBV5-6-201ENST00000390375 U2AF1L5P0DN76 240 aaPredicted RBP13.86□□□□□ -0.19
TRBV5-6-201ENST00000390375 U2AF1Q01081 240 aaKnown RBP eCLIP13.86□□□□□ -0.19
TRBV5-6-201ENST00000390375 BARGINQ6ZT62 677 aa13.86□□□□□ -0.19
TRBV5-6-201ENST00000390375 MIER1Q8N108 512 aa13.86□□□□□ -0.19
TRBV5-6-201ENST00000390375 RAPGEF4Q8WZA2 1011 aa13.86□□□□□ -0.19
TRBV5-6-201ENST00000390375 RGPD1P0DJD0 1748 aa13.85□□□□□ -0.19
TRBV5-6-201ENST00000390375 NBPF6Q5VWK0 638 aa13.85□□□□□ -0.19
TRBV5-6-201ENST00000390375 GJD4Q96KN9 370 aaPredicted RBP13.85□□□□□ -0.19
TRBV5-6-201ENST00000390375 NBPF4Q96M43 638 aa13.85□□□□□ -0.19
TRBV5-6-201ENST00000390375 IL2RBP14784 551 aa13.84□□□□□ -0.19
TRBV5-6-201ENST00000390375 RBM6P78332 1123 aaKnown RBP13.84□□□□□ -0.19
TRBV5-6-201ENST00000390375 SULT6B1Q6IMI4 303 aa13.84□□□□□ -0.19
TRBV5-6-201ENST00000390375 TATP17735 454 aaPredicted RBP13.83□□□□□ -0.2
TRBV5-6-201ENST00000390375 AMOTQ4VCS5 1084 aa13.83□□□□□ -0.2
TRBV5-6-201ENST00000390375 USP35Q9P2H5 1018 aa13.83□□□□□ -0.2
TRBV5-6-201ENST00000390375 RXRBP28702 533 aa13.82□□□□□ -0.2
TRBV5-6-201ENST00000390375 PNISRQ8TF01 805 aaKnown RBP13.82□□□□□ -0.2
TRBV5-6-201ENST00000390375 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.82□□□□□ -0.2
TRBV5-6-201ENST00000390375 PARP4Q9UKK3 1724 aaKnown RBP13.81□□□□□ -0.2
TRBV5-6-201ENST00000390375 MAPK8IP3Q9UPT6 1336 aa13.81□□□□□ -0.2
TRBV5-6-201ENST00000390375 ONECUT3O60422 494 aaPredicted RBP13.8□□□□□ -0.2
TRBV5-6-201ENST00000390375 PLEKHO1Q53GL0 409 aaPredicted RBP13.8□□□□□ -0.2
TRBV5-6-201ENST00000390375 RSPH6AQ9H0K4 717 aa13.8□□□□□ -0.2
TRBV5-6-201ENST00000390375 SPG7Q9UQ90 795 aa13.8□□□□□ -0.2
TRBV5-6-201ENST00000390375 OVOS2A0A0G2JMS6 1433 aa13.8□□□□□ -0.2
TRBV5-6-201ENST00000390375 DISP2A7MBM2 1401 aa13.8□□□□□ -0.2
TRBV5-6-201ENST00000390375 RGPD2P0DJD1 1756 aa13.79□□□□□ -0.2
TRBV5-6-201ENST00000390375 HMOX1P09601 288 aa13.79□□□□□ -0.2
TRBV5-6-201ENST00000390375 USHBP1Q8N6Y0 703 aa13.79□□□□□ -0.2
TRBV5-6-201ENST00000390375 GAS2L2Q8NHY3 880 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms