RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 PER1O15534 1290 aaPredicted RBP20.46■□□□□ 0.87
VCX3B-201ENST00000381029 SOX12O15370 315 aa20.45■□□□□ 0.86
VCX3B-201ENST00000381029 FBLN1P23142 703 aa20.45■□□□□ 0.86
VCX3B-201ENST00000381029 CGNL1Q0VF96 1302 aa20.44■□□□□ 0.86
VCX3B-201ENST00000381029 LARP1Q6PKG0 1096 aaKnown RBP20.43■□□□□ 0.86
VCX3B-201ENST00000381029 SPATA31A1Q5TZJ5 1347 aa20.43■□□□□ 0.86
VCX3B-201ENST00000381029 LTN1O94822 1766 aa20.42■□□□□ 0.86
VCX3B-201ENST00000381029 MAP3K19Q56UN5 1328 aa20.42■□□□□ 0.86
VCX3B-201ENST00000381029 ZEB1P37275 1124 aaPredicted RBP20.41■□□□□ 0.86
VCX3B-201ENST00000381029 AMER1Q5JTC6 1135 aaPredicted RBP20.41■□□□□ 0.86
VCX3B-201ENST00000381029 STRN4Q9NRL3 753 aa20.41■□□□□ 0.86
VCX3B-201ENST00000381029 RGPD5Q99666 1765 aa20.4■□□□□ 0.86
VCX3B-201ENST00000381029 THSD7AQ9UPZ6 1657 aa20.39■□□□□ 0.86
VCX3B-201ENST00000381029 NSD2O96028 1365 aa20.39■□□□□ 0.85
VCX3B-201ENST00000381029 WDR17Q8IZU2 1322 aa20.39■□□□□ 0.85
VCX3B-201ENST00000381029 ZBTB7CA1YPR0 619 aa20.39■□□□□ 0.85
VCX3B-201ENST00000381029 IP6K1Q92551 441 aa20.39■□□□□ 0.85
VCX3B-201ENST00000381029 ANKRD26Q9UPS8 1709 aa20.39■□□□□ 0.85
VCX3B-201ENST00000381029 CRB1P82279 1406 aa20.38■□□□□ 0.85
VCX3B-201ENST00000381029 ERBB3P21860 1342 aa20.38■□□□□ 0.85
VCX3B-201ENST00000381029 BLMP54132 1417 aaPredicted RBP20.37■□□□□ 0.85
VCX3B-201ENST00000381029 PEAK1Q9H792 1746 aa20.37■□□□□ 0.85
VCX3B-201ENST00000381029 HOXC9P31274 260 aa20.37■□□□□ 0.85
VCX3B-201ENST00000381029 RRS1Q15050 365 aaKnown RBP20.37■□□□□ 0.85
VCX3B-201ENST00000381029 CCDC9Q9Y3X0 531 aaKnown RBP20.37■□□□□ 0.85
VCX3B-201ENST00000381029 RTL1A6NKG5 1358 aa20.36■□□□□ 0.85
VCX3B-201ENST00000381029 EVA1CP58658 441 aa20.36■□□□□ 0.85
VCX3B-201ENST00000381029 FAM98CQ17RN3 349 aaKnown RBP20.36■□□□□ 0.85
VCX3B-201ENST00000381029 BARGINQ6ZT62 677 aa20.36■□□□□ 0.85
VCX3B-201ENST00000381029 KIF24Q5T7B8 1368 aa20.35■□□□□ 0.85
VCX3B-201ENST00000381029 SEPT12Q8IYM1 358 aa20.35■□□□□ 0.85
VCX3B-201ENST00000381029 NPC1L1Q9UHC9 1359 aa20.34■□□□□ 0.85
VCX3B-201ENST00000381029 KNSTRNQ9Y448 316 aa20.34■□□□□ 0.85
VCX3B-201ENST00000381029 TCP11L2Q8N4U5 519 aa20.33■□□□□ 0.85
VCX3B-201ENST00000381029 CARD10Q9BWT7 1032 aa20.33■□□□□ 0.85
VCX3B-201ENST00000381029 THRAP3Q9Y2W1 955 aaKnown RBP20.33■□□□□ 0.85
VCX3B-201ENST00000381029 EMILIN1Q9Y6C2 1016 aa20.33■□□□□ 0.85
VCX3B-201ENST00000381029 EP400Q96L91 3159 aa20.32■□□□□ 0.84
VCX3B-201ENST00000381029 POLKQ9UBT6 870 aa20.32■□□□□ 0.84
VCX3B-201ENST00000381029 DISP2A7MBM2 1401 aa20.32■□□□□ 0.84
VCX3B-201ENST00000381029 BRWD3Q6RI45 1802 aa20.32■□□□□ 0.84
VCX3B-201ENST00000381029 SMG6Q86US8 1419 aaKnown RBP20.31■□□□□ 0.84
VCX3B-201ENST00000381029 ANKRD24Q8TF21 1146 aa20.31■□□□□ 0.84
VCX3B-201ENST00000381029 FLT4P35916 1363 aa20.31■□□□□ 0.84
VCX3B-201ENST00000381029 TOM1L2Q6ZVM7 507 aa20.3■□□□□ 0.84
VCX3B-201ENST00000381029 USP35Q9P2H5 1018 aa20.3■□□□□ 0.84
VCX3B-201ENST00000381029 INSRP06213 1382 aa20.3■□□□□ 0.84
VCX3B-201ENST00000381029 AMPHP49418 695 aa20.29■□□□□ 0.84
VCX3B-201ENST00000381029 HSP90AB2PQ58FF8 381 aa20.29■□□□□ 0.84
VCX3B-201ENST00000381029 PARP4Q9UKK3 1724 aaKnown RBP20.27■□□□□ 0.84
VCX3B-201ENST00000381029 MAP2P11137 1827 aaKnown RBP20.26■□□□□ 0.83
VCX3B-201ENST00000381029 WNK3Q9BYP7 1800 aa20.26■□□□□ 0.83
VCX3B-201ENST00000381029 FAM208AQ9UK61 1670 aaKnown RBP20.26■□□□□ 0.83
VCX3B-201ENST00000381029 CSB-PGBD3P0DP91 1061 aa20.25■□□□□ 0.83
VCX3B-201ENST00000381029 KRT27Q7Z3Y8 459 aa20.25■□□□□ 0.83
VCX3B-201ENST00000381029 MORC1Q86VD1 984 aa20.25■□□□□ 0.83
VCX3B-201ENST00000381029 UPF1Q92900 1129 aaKnown RBP eCLIP20.25■□□□□ 0.83
VCX3B-201ENST00000381029 NCAPD2Q15021 1401 aa20.25■□□□□ 0.83
VCX3B-201ENST00000381029 TNNT2P45379 298 aaPredicted RBP20.24■□□□□ 0.83
VCX3B-201ENST00000381029 LRRC37A3O60309 1634 aa20.24■□□□□ 0.83
VCX3B-201ENST00000381029 NBPF6Q5VWK0 638 aa20.23■□□□□ 0.83
VCX3B-201ENST00000381029 NBPF4Q96M43 638 aa20.23■□□□□ 0.83
VCX3B-201ENST00000381029 NLRP2Q9NX02 1062 aa20.23■□□□□ 0.83
VCX3B-201ENST00000381029 CC2D1BQ5T0F9 858 aaKnown RBP20.22■□□□□ 0.83
VCX3B-201ENST00000381029 LTV1Q96GA3 475 aaPredicted RBP20.22■□□□□ 0.83
VCX3B-201ENST00000381029 RGPD2P0DJD1 1756 aa20.21■□□□□ 0.83
VCX3B-201ENST00000381029 CDCA7Q9BWT1 371 aaPredicted RBP20.21■□□□□ 0.83
VCX3B-201ENST00000381029 A0A0G2JS52 829 aa20.19■□□□□ 0.82
VCX3B-201ENST00000381029 MYT1Q01538 1121 aa20.19■□□□□ 0.82
VCX3B-201ENST00000381029 EIF4A2Q14240 407 aaKnown RBP20.18■□□□□ 0.82
VCX3B-201ENST00000381029 FAM182BQ5T319 152 aa20.18■□□□□ 0.82
VCX3B-201ENST00000381029 TNS2Q63HR2 1409 aa20.18■□□□□ 0.82
VCX3B-201ENST00000381029 PPM1GO15355 546 aaPredicted RBP20.17■□□□□ 0.82
VCX3B-201ENST00000381029 MEGF6O75095 1541 aa20.17■□□□□ 0.82
VCX3B-201ENST00000381029 IL2RBP14784 551 aa20.16■□□□□ 0.82
VCX3B-201ENST00000381029 DDB1Q16531 1140 aa20.16■□□□□ 0.82
VCX3B-201ENST00000381029 BCL9O00512 1426 aa20.16■□□□□ 0.82
VCX3B-201ENST00000381029 USHBP1Q8N6Y0 703 aa20.15■□□□□ 0.82
VCX3B-201ENST00000381029 MARCH10Q8NA82 808 aaPredicted RBP20.15■□□□□ 0.82
VCX3B-201ENST00000381029 EYA1Q99502 592 aa20.15■□□□□ 0.82
VCX3B-201ENST00000381029 OVOS2A0A0G2JMS6 1433 aa20.14■□□□□ 0.81
VCX3B-201ENST00000381029 MTHFSP49914 203 aa20.14■□□□□ 0.81
VCX3B-201ENST00000381029 DDX10Q13206 875 aaKnown RBP20.14■□□□□ 0.81
VCX3B-201ENST00000381029 COL3A1P02461 1466 aaPredicted RBP20.13■□□□□ 0.81
VCX3B-201ENST00000381029 PARD3Q8TEW0 1356 aa20.12■□□□□ 0.81
VCX3B-201ENST00000381029 IGSF1Q8N6C5 1336 aa20.12■□□□□ 0.81
VCX3B-201ENST00000381029 IL13P35225 146 aa20.12■□□□□ 0.81
VCX3B-201ENST00000381029 PDE3BQ13370 1112 aa20.12■□□□□ 0.81
VCX3B-201ENST00000381029 RGPD1P0DJD0 1748 aa20.12■□□□□ 0.81
VCX3B-201ENST00000381029 FAM196AQ6ZSG2 479 aa20.11■□□□□ 0.81
VCX3B-201ENST00000381029 SHANK3Q9BYB0 1731 aa20.1■□□□□ 0.81
VCX3B-201ENST00000381029 EXOC5O00471 708 aa20.1■□□□□ 0.81
VCX3B-201ENST00000381029 CCDC125Q86Z20 511 aa20.1■□□□□ 0.81
VCX3B-201ENST00000381029 PPP2R1AP30153 589 aa20.08■□□□□ 0.81
VCX3B-201ENST00000381029 KDRP35968 1356 aa20.08■□□□□ 0.8
VCX3B-201ENST00000381029 CNGB1Q14028 1251 aaPredicted RBP20.07■□□□□ 0.8
VCX3B-201ENST00000381029 TNS1Q9HBL0 1735 aaKnown RBP20.07■□□□□ 0.8
VCX3B-201ENST00000381029 ZNF316A6NFI3 1004 aaPredicted RBP20.06■□□□□ 0.8
VCX3B-201ENST00000381029 PLEKHG2Q9H7P9 1386 aa20.06■□□□□ 0.8
VCX3B-201ENST00000381029 PKD1L3Q7Z443 1732 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms