RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 PHRF1Q9P1Y6 1649 aaKnown RBP18.89■□□□□ 0.61
HERPUD1-203ENST00000379792 ZNF772Q68DY9 489 aaPredicted RBP18.88■□□□□ 0.61
HERPUD1-203ENST00000379792 DIAPH1O60610 1272 aaKnown RBP18.88■□□□□ 0.61
HERPUD1-203ENST00000379792 POTEAQ6S8J7 498 aa18.88■□□□□ 0.61
HERPUD1-203ENST00000379792 FLT4P35916 1363 aa18.88■□□□□ 0.61
HERPUD1-203ENST00000379792 KIAA0232Q92628 1395 aa18.88■□□□□ 0.61
HERPUD1-203ENST00000379792 COL3A1P02461 1466 aaPredicted RBP18.88■□□□□ 0.61
HERPUD1-203ENST00000379792 CDK12Q9NYV4 1490 aaPredicted RBP18.88■□□□□ 0.61
HERPUD1-203ENST00000379792 CRYBG1Q9Y4K1 1723 aa18.87■□□□□ 0.61
HERPUD1-203ENST00000379792 WDR43Q15061 677 aaKnown RBP eCLIP18.87■□□□□ 0.61
HERPUD1-203ENST00000379792 IP6K1Q92551 441 aa18.87■□□□□ 0.61
HERPUD1-203ENST00000379792 LTV1Q96GA3 475 aaPredicted RBP18.87■□□□□ 0.61
HERPUD1-203ENST00000379792 INSRP06213 1382 aa18.87■□□□□ 0.61
HERPUD1-203ENST00000379792 U2SURPO15042 1029 aaKnown RBP18.86■□□□□ 0.61
HERPUD1-203ENST00000379792 EIF4A2Q14240 407 aaKnown RBP18.86■□□□□ 0.61
HERPUD1-203ENST00000379792 ADAMTS8Q9UP79 889 aa18.86■□□□□ 0.61
HERPUD1-203ENST00000379792 AXIN2Q9Y2T1 843 aa18.86■□□□□ 0.61
HERPUD1-203ENST00000379792 PRDM11Q9NQV5 511 aa18.86■□□□□ 0.61
HERPUD1-203ENST00000379792 IL13P35225 146 aa18.85■□□□□ 0.61
HERPUD1-203ENST00000379792 YTHDC1Q96MU7 727 aaKnown RBP18.85■□□□□ 0.61
HERPUD1-203ENST00000379792 LTN1O94822 1766 aa18.84■□□□□ 0.61
HERPUD1-203ENST00000379792 ADAMTS2O95450 1211 aa18.83■□□□□ 0.61
HERPUD1-203ENST00000379792 U2AF1L5P0DN76 240 aaPredicted RBP18.83■□□□□ 0.61
HERPUD1-203ENST00000379792 U2AF1Q01081 240 aaKnown RBP eCLIP18.83■□□□□ 0.61
HERPUD1-203ENST00000379792 C8orf37Q96NL8 207 aa18.83■□□□□ 0.61
HERPUD1-203ENST00000379792 NUDCQ9Y266 331 aa18.83■□□□□ 0.61
HERPUD1-203ENST00000379792 ABCA3Q99758 1704 aa18.83■□□□□ 0.61
HERPUD1-203ENST00000379792 RTL1A6NKG5 1358 aa18.83■□□□□ 0.6
HERPUD1-203ENST00000379792 CPDO75976 1380 aa18.83■□□□□ 0.6
HERPUD1-203ENST00000379792 KIF24Q5T7B8 1368 aa18.83■□□□□ 0.6
HERPUD1-203ENST00000379792 AFF2P51816 1311 aa18.83■□□□□ 0.6
HERPUD1-203ENST00000379792 SENP3-EIF4A1A0A087X0R7 540 aa18.83■□□□□ 0.6
HERPUD1-203ENST00000379792 FAM83GA6ND36 823 aa18.82■□□□□ 0.6
HERPUD1-203ENST00000379792 NGLY1Q96IV0 654 aa18.81■□□□□ 0.6
HERPUD1-203ENST00000379792 ANKRD24Q8TF21 1146 aa18.8■□□□□ 0.6
HERPUD1-203ENST00000379792 HMOX1P09601 288 aa18.79■□□□□ 0.6
HERPUD1-203ENST00000379792 CCDC146Q8IYE0 955 aa18.79■□□□□ 0.6
HERPUD1-203ENST00000379792 FNBP4Q8N3X1 1017 aaPredicted RBP18.78■□□□□ 0.6
HERPUD1-203ENST00000379792 EYA1Q99502 592 aa18.78■□□□□ 0.6
HERPUD1-203ENST00000379792 BLMP54132 1417 aaPredicted RBP18.77■□□□□ 0.59
HERPUD1-203ENST00000379792 COL18A1P39060 1754 aa18.77■□□□□ 0.59
HERPUD1-203ENST00000379792 AEBP1Q8IUX7 1158 aa18.76■□□□□ 0.59
HERPUD1-203ENST00000379792 USHBP1Q8N6Y0 703 aa18.76■□□□□ 0.59
HERPUD1-203ENST00000379792 NBPF6Q5VWK0 638 aa18.76■□□□□ 0.59
HERPUD1-203ENST00000379792 SULT6B1Q6IMI4 303 aa18.76■□□□□ 0.59
HERPUD1-203ENST00000379792 NBPF4Q96M43 638 aa18.76■□□□□ 0.59
HERPUD1-203ENST00000379792 RGPD5Q99666 1765 aa18.75■□□□□ 0.59
HERPUD1-203ENST00000379792 CAMTA1Q9Y6Y1 1673 aa18.75■□□□□ 0.59
HERPUD1-203ENST00000379792 CSB-PGBD3P0DP91 1061 aa18.75■□□□□ 0.59
HERPUD1-203ENST00000379792 RXRBP28702 533 aa18.75■□□□□ 0.59
HERPUD1-203ENST00000379792 BTG4Q9NY30 223 aa18.75■□□□□ 0.59
HERPUD1-203ENST00000379792 ERBB3P21860 1342 aa18.75■□□□□ 0.59
HERPUD1-203ENST00000379792 QTRT2Q9H974 415 aaKnown RBP18.74■□□□□ 0.59
HERPUD1-203ENST00000379792 STRN4Q9NRL3 753 aa18.74■□□□□ 0.59
HERPUD1-203ENST00000379792 USP21Q9UK80 565 aa18.74■□□□□ 0.59
HERPUD1-203ENST00000379792 HNRNPUQ00839 825 aaKnown RBP eCLIP18.73■□□□□ 0.59
HERPUD1-203ENST00000379792 EVA1CP58658 441 aa18.73■□□□□ 0.59
HERPUD1-203ENST00000379792 RSPH6AQ9H0K4 717 aa18.73■□□□□ 0.59
HERPUD1-203ENST00000379792 NLRP2Q9NX02 1062 aa18.73■□□□□ 0.59
HERPUD1-203ENST00000379792 IGSF1Q8N6C5 1336 aa18.72■□□□□ 0.59
HERPUD1-203ENST00000379792 FCHSD2O94868 740 aa18.72■□□□□ 0.59
HERPUD1-203ENST00000379792 PRKAR2BP31323 418 aa18.72■□□□□ 0.59
HERPUD1-203ENST00000379792 BCL9LQ86UU0 1499 aa18.71■□□□□ 0.59
HERPUD1-203ENST00000379792 RBM6P78332 1123 aaKnown RBP18.71■□□□□ 0.59
HERPUD1-203ENST00000379792 TRPC5Q9UL62 973 aaPredicted RBP18.71■□□□□ 0.59
HERPUD1-203ENST00000379792 SALL2Q9Y467 1007 aaPredicted RBP18.71■□□□□ 0.59
HERPUD1-203ENST00000379792 LMO7Q8WWI1 1683 aa18.71■□□□□ 0.59
HERPUD1-203ENST00000379792 SLIT2O94813 1529 aa18.71■□□□□ 0.59
HERPUD1-203ENST00000379792 RUNDC1Q96C34 613 aa18.7■□□□□ 0.58
HERPUD1-203ENST00000379792 PLEKHF1Q96S99 279 aa18.7■□□□□ 0.58
HERPUD1-203ENST00000379792 ABCC6O95255 1503 aa18.7■□□□□ 0.58
HERPUD1-203ENST00000379792 LARP1Q6PKG0 1096 aaKnown RBP18.7■□□□□ 0.58
HERPUD1-203ENST00000379792 ATRNO75882 1429 aa18.7■□□□□ 0.58
HERPUD1-203ENST00000379792 COL5A2P05997 1499 aaPredicted RBP18.7■□□□□ 0.58
HERPUD1-203ENST00000379792 RGPD1P0DJD0 1748 aa18.69■□□□□ 0.58
HERPUD1-203ENST00000379792 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.69■□□□□ 0.58
HERPUD1-203ENST00000379792 APAF1O14727 1248 aa18.69■□□□□ 0.58
HERPUD1-203ENST00000379792 PHACTR3Q96KR7 559 aa18.69■□□□□ 0.58
HERPUD1-203ENST00000379792 COL14A1Q05707 1796 aaKnown RBP18.69■□□□□ 0.58
HERPUD1-203ENST00000379792 RGPD2P0DJD1 1756 aa18.68■□□□□ 0.58
HERPUD1-203ENST00000379792 TOM1L2Q6ZVM7 507 aa18.68■□□□□ 0.58
HERPUD1-203ENST00000379792 WDR17Q8IZU2 1322 aa18.68■□□□□ 0.58
HERPUD1-203ENST00000379792 RRP7AQ9Y3A4 280 aaKnown RBP18.68■□□□□ 0.58
HERPUD1-203ENST00000379792 UNC5CLQ8IV45 518 aa18.67■□□□□ 0.58
HERPUD1-203ENST00000379792 TCP11L2Q8N4U5 519 aa18.67■□□□□ 0.58
HERPUD1-203ENST00000379792 NWD2Q9ULI1 1742 aa18.67■□□□□ 0.58
HERPUD1-203ENST00000379792 PNNQ9H307 717 aaKnown RBP18.66■□□□□ 0.58
HERPUD1-203ENST00000379792 KDRP35968 1356 aa18.66■□□□□ 0.58
HERPUD1-203ENST00000379792 MAPK8IP3Q9UPT6 1336 aa18.66■□□□□ 0.58
HERPUD1-203ENST00000379792 NEUROD2Q15784 382 aa18.65■□□□□ 0.58
HERPUD1-203ENST00000379792 USP35Q9P2H5 1018 aa18.65■□□□□ 0.58
HERPUD1-203ENST00000379792 PLCH1Q4KWH8 1693 aa18.65■□□□□ 0.58
HERPUD1-203ENST00000379792 NEFMP07197 916 aa18.63■□□□□ 0.57
HERPUD1-203ENST00000379792 CARD10Q9BWT7 1032 aa18.63■□□□□ 0.57
HERPUD1-203ENST00000379792 RGS12O14924 1447 aa18.62■□□□□ 0.57
HERPUD1-203ENST00000379792 GJD4Q96KN9 370 aaPredicted RBP18.62■□□□□ 0.57
HERPUD1-203ENST00000379792 NCAPD2Q15021 1401 aa18.61■□□□□ 0.57
HERPUD1-203ENST00000379792 TMPOP42166 694 aaKnown RBP18.61■□□□□ 0.57
HERPUD1-203ENST00000379792 CRB1P82279 1406 aa18.61■□□□□ 0.57
HERPUD1-203ENST00000379792 CCDC9Q9Y3X0 531 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms