RNA–Protein interactions for RNA: ENST00000378887.3

SDHAF1-201, Transcript of succinate dehydrogenase complex assembly factor 1, humanhuman

APPRIS P1 BASIC

Gene SDHAF1, Length 1,117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF1-201ENST00000378887 UPF1Q92900 1129 aaKnown RBP eCLIP33■■■□□ 2.871e-6■■■■□ 23.1
SDHAF1-201ENST00000378887 WNK3Q9BYP7 1800 aa33■■■□□ 2.87
SDHAF1-201ENST00000378887 SEPT12Q8IYM1 358 aa32.99■■■□□ 2.87
SDHAF1-201ENST00000378887 KIF7Q2M1P5 1343 aa32.98■■■□□ 2.87
SDHAF1-201ENST00000378887 SOX12O15370 315 aa32.97■■■□□ 2.87
SDHAF1-201ENST00000378887 STRN4Q9NRL3 753 aa32.97■■■□□ 2.87
SDHAF1-201ENST00000378887 CRB1P82279 1406 aa32.96■■■□□ 2.87
SDHAF1-201ENST00000378887 FBLN1P23142 703 aa32.96■■■□□ 2.87
SDHAF1-201ENST00000378887 FAM98CQ17RN3 349 aaKnown RBP32.96■■■□□ 2.87
SDHAF1-201ENST00000378887 PEAK1Q9H792 1746 aa32.95■■■□□ 2.87
SDHAF1-201ENST00000378887 PARP4Q9UKK3 1724 aaKnown RBP32.94■■■□□ 2.86
SDHAF1-201ENST00000378887 ANKRD26Q9UPS8 1709 aa32.94■■■□□ 2.86
SDHAF1-201ENST00000378887 GGNBP2Q9H3C7 697 aa32.93■■■□□ 2.86
SDHAF1-201ENST00000378887 BARGINQ6ZT62 677 aa32.92■■■□□ 2.86
SDHAF1-201ENST00000378887 CCDC9Q9Y3X0 531 aaKnown RBP32.92■■■□□ 2.86
SDHAF1-201ENST00000378887 WDR17Q8IZU2 1322 aa32.92■■■□□ 2.86
SDHAF1-201ENST00000378887 DISP2A7MBM2 1401 aa32.9■■■□□ 2.86
SDHAF1-201ENST00000378887 MAP3K19Q56UN5 1328 aa32.89■■■□□ 2.86
SDHAF1-201ENST00000378887 LRRC37A3O60309 1634 aa32.88■■■□□ 2.85
SDHAF1-201ENST00000378887 ERBB3P21860 1342 aa32.88■■■□□ 2.85
SDHAF1-201ENST00000378887 COG3Q96JB2 828 aa32.88■■■□□ 2.85
SDHAF1-201ENST00000378887 ZBTB7CA1YPR0 619 aa32.87■■■□□ 2.85
SDHAF1-201ENST00000378887 PANK3Q9H999 370 aa32.86■■■□□ 2.85
SDHAF1-201ENST00000378887 BLMP54132 1417 aaPredicted RBP32.85■■■□□ 2.85
SDHAF1-201ENST00000378887 EVA1CP58658 441 aa32.85■■■□□ 2.85
SDHAF1-201ENST00000378887 TCP11L2Q8N4U5 519 aa32.85■■■□□ 2.85
SDHAF1-201ENST00000378887 WASHC2AQ641Q2 1341 aa32.84■■■□□ 2.85
SDHAF1-201ENST00000378887 FAM208AQ9UK61 1670 aaKnown RBP32.84■■■□□ 2.85
SDHAF1-201ENST00000378887 CCDC7Q96M83 1385 aa32.83■■■□□ 2.85
SDHAF1-201ENST00000378887 THRAP3Q9Y2W1 955 aaKnown RBP32.83■■■□□ 2.85
SDHAF1-201ENST00000378887 IP6K1Q92551 441 aa32.82■■■□□ 2.84
SDHAF1-201ENST00000378887 POLR3GLQ9BT43 218 aa32.81■■■□□ 2.84
SDHAF1-201ENST00000378887 USP35Q9P2H5 1018 aa32.81■■■□□ 2.84
SDHAF1-201ENST00000378887 RGPD2P0DJD1 1756 aa32.81■■■□□ 2.84
SDHAF1-201ENST00000378887 KRT27Q7Z3Y8 459 aa32.8■■■□□ 2.84
SDHAF1-201ENST00000378887 CARD10Q9BWT7 1032 aa32.8■■■□□ 2.84
SDHAF1-201ENST00000378887 RTL1A6NKG5 1358 aa32.8■■■□□ 2.84
SDHAF1-201ENST00000378887 HOXC9P31274 260 aa32.79■■■□□ 2.84
SDHAF1-201ENST00000378887 RRS1Q15050 365 aaKnown RBP32.79■■■□□ 2.84
SDHAF1-201ENST00000378887 CGNL1Q0VF96 1302 aa32.77■■■□□ 2.84
SDHAF1-201ENST00000378887 PER1O15534 1290 aaPredicted RBP32.76■■■□□ 2.83
SDHAF1-201ENST00000378887 MAP2P11137 1827 aaKnown RBP32.75■■■□□ 2.83
SDHAF1-201ENST00000378887 TNS1Q9HBL0 1735 aaKnown RBP32.75■■■□□ 2.83
SDHAF1-201ENST00000378887 TOM1L2Q6ZVM7 507 aa32.75■■■□□ 2.83
SDHAF1-201ENST00000378887 ANKRD24Q8TF21 1146 aa32.74■■■□□ 2.83
SDHAF1-201ENST00000378887 FAM182BQ5T319 152 aa32.73■■■□□ 2.83
SDHAF1-201ENST00000378887 KIF24Q5T7B8 1368 aa32.72■■■□□ 2.83
SDHAF1-201ENST00000378887 AMER1Q5JTC6 1135 aaPredicted RBP32.72■■■□□ 2.83
SDHAF1-201ENST00000378887 SMG6Q86US8 1419 aaKnown RBP32.7■■■□□ 2.83
SDHAF1-201ENST00000378887 EMILIN1Q9Y6C2 1016 aa32.7■■■□□ 2.83
SDHAF1-201ENST00000378887 NSD2O96028 1365 aa32.7■■■□□ 2.82
SDHAF1-201ENST00000378887 INSRP06213 1382 aa32.68■■■□□ 2.82
SDHAF1-201ENST00000378887 NCAPD2Q15021 1401 aa32.68■■■□□ 2.82
SDHAF1-201ENST00000378887 SHANK3Q9BYB0 1731 aa32.67■■■□□ 2.82
SDHAF1-201ENST00000378887 FLT4P35916 1363 aa32.67■■■□□ 2.82
SDHAF1-201ENST00000378887 SBF2Q86WG5 1849 aa32.66■■■□□ 2.82
SDHAF1-201ENST00000378887 HSP90AB2PQ58FF8 381 aa32.66■■■□□ 2.82
SDHAF1-201ENST00000378887 RGPD1P0DJD0 1748 aa32.65■■■□□ 2.82
SDHAF1-201ENST00000378887 A0A0G2JS52 829 aa32.65■■■□□ 2.82
SDHAF1-201ENST00000378887 MYT1Q01538 1121 aa32.65■■■□□ 2.82
SDHAF1-201ENST00000378887 POLKQ9UBT6 870 aa32.65■■■□□ 2.82
SDHAF1-201ENST00000378887 CSB-PGBD3P0DP91 1061 aa32.64■■■□□ 2.82
SDHAF1-201ENST00000378887 TNS2Q63HR2 1409 aa32.64■■■□□ 2.82
SDHAF1-201ENST00000378887 AMPHP49418 695 aa32.63■■■□□ 2.81
SDHAF1-201ENST00000378887 BCL9O00512 1426 aa32.62■■■□□ 2.81
SDHAF1-201ENST00000378887 NLRP2Q9NX02 1062 aa32.6■■■□□ 2.81
SDHAF1-201ENST00000378887 MEGF6O75095 1541 aa32.6■■■□□ 2.81
SDHAF1-201ENST00000378887 NBPF6Q5VWK0 638 aa32.59■■■□□ 2.81
SDHAF1-201ENST00000378887 CCDC125Q86Z20 511 aa32.59■■■□□ 2.81
SDHAF1-201ENST00000378887 MARCH10Q8NA82 808 aaPredicted RBP32.59■■■□□ 2.81
SDHAF1-201ENST00000378887 NBPF4Q96M43 638 aa32.59■■■□□ 2.81
SDHAF1-201ENST00000378887 CDCA7Q9BWT1 371 aaPredicted RBP32.59■■■□□ 2.81
SDHAF1-201ENST00000378887 NPC1L1Q9UHC9 1359 aa32.58■■■□□ 2.81
SDHAF1-201ENST00000378887 LTV1Q96GA3 475 aaPredicted RBP32.57■■■□□ 2.8
SDHAF1-201ENST00000378887 OVOS2A0A0G2JMS6 1433 aa32.55■■■□□ 2.8
SDHAF1-201ENST00000378887 DDB1Q16531 1140 aa32.55■■■□□ 2.8
SDHAF1-201ENST00000378887 KNSTRNQ9Y448 316 aa32.54■■■□□ 2.8
SDHAF1-201ENST00000378887 FAM196AQ6ZSG2 479 aa32.53■■■□□ 2.8
SDHAF1-201ENST00000378887 DEFB132Q7Z7B7 95 aa32.53■■■□□ 2.8
SDHAF1-201ENST00000378887 IL2RBP14784 551 aa32.52■■■□□ 2.8
SDHAF1-201ENST00000378887 PDE3BQ13370 1112 aa32.52■■■□□ 2.8
SDHAF1-201ENST00000378887 TNNT2P45379 298 aaPredicted RBP32.49■■■□□ 2.79
SDHAF1-201ENST00000378887 PTF1AQ7RTS3 328 aa32.49■■■□□ 2.79
SDHAF1-201ENST00000378887 PKD1L3Q7Z443 1732 aa32.48■■■□□ 2.79
SDHAF1-201ENST00000378887 USHBP1Q8N6Y0 703 aa32.47■■■□□ 2.79
SDHAF1-201ENST00000378887 RREB1Q92766 1687 aa32.46■■■□□ 2.79
SDHAF1-201ENST00000378887 NHSQ6T4R5 1651 aa32.46■■■□□ 2.79
SDHAF1-201ENST00000378887 TRIM37O94972 964 aa32.45■■■□□ 2.79
SDHAF1-201ENST00000378887 MORC1Q86VD1 984 aa32.45■■■□□ 2.79
SDHAF1-201ENST00000378887 EIF4A2Q14240 407 aaKnown RBP32.44■■■□□ 2.78
SDHAF1-201ENST00000378887 RGPD3A6NKT7 1758 aaPredicted RBP32.44■■■□□ 2.78
SDHAF1-201ENST00000378887 RGPD4Q7Z3J3 1758 aa32.44■■■□□ 2.78
SDHAF1-201ENST00000378887 EXOC5O00471 708 aa32.43■■■□□ 2.78
SDHAF1-201ENST00000378887 EYA1Q99502 592 aa32.42■■■□□ 2.78
SDHAF1-201ENST00000378887 COL3A1P02461 1466 aaPredicted RBP32.42■■■□□ 2.78
SDHAF1-201ENST00000378887 PPM1GO15355 546 aaPredicted RBP32.4■■■□□ 2.78
SDHAF1-201ENST00000378887 SRCAPQ6ZRS2 3230 aa32.39■■■□□ 2.78
SDHAF1-201ENST00000378887 CAMKK2Q96RR4 588 aa32.39■■■□□ 2.78
SDHAF1-201ENST00000378887 IGSF1Q8N6C5 1336 aa32.38■■■□□ 2.77
SDHAF1-201ENST00000378887 CC2D1BQ5T0F9 858 aaKnown RBP32.38■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms