RNA–Protein interactions for RNA: ENST00000378197.4

RPP38-201, Transcript of ribonuclease P/MRP subunit p38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPP38, Length 1,457 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38-201ENST00000378197 SPATA31A1Q5TZJ5 1347 aa31.88■■■□□ 2.69
RPP38-201ENST00000378197 ONECUT3O60422 494 aaPredicted RBP31.88■■■□□ 2.69
RPP38-201ENST00000378197 FAM98CQ17RN3 349 aaKnown RBP31.88■■■□□ 2.69
RPP38-201ENST00000378197 LTN1O94822 1766 aa31.88■■■□□ 2.69
RPP38-201ENST00000378197 KIF7Q2M1P5 1343 aa31.87■■■□□ 2.69
RPP38-201ENST00000378197 SEPT12Q8IYM1 358 aa31.87■■■□□ 2.69
RPP38-201ENST00000378197 ABCC6O95255 1503 aa31.86■■■□□ 2.69
RPP38-201ENST00000378197 RGPD5Q99666 1765 aa31.85■■■□□ 2.69
RPP38-201ENST00000378197 USP35Q9P2H5 1018 aa31.84■■■□□ 2.69
RPP38-201ENST00000378197 PANK3Q9H999 370 aa31.84■■■□□ 2.69
RPP38-201ENST00000378197 A0A0G2JS52 829 aa31.83■■■□□ 2.69
RPP38-201ENST00000378197 MYT1Q01538 1121 aa31.83■■■□□ 2.69
RPP38-201ENST00000378197 BRWD3Q6RI45 1802 aa31.82■■■□□ 2.68
RPP38-201ENST00000378197 CRB1P82279 1406 aa31.81■■■□□ 2.68
RPP38-201ENST00000378197 CGNL1Q0VF96 1302 aa31.8■■■□□ 2.68
RPP38-201ENST00000378197 WDR17Q8IZU2 1322 aa31.8■■■□□ 2.68
RPP38-201ENST00000378197 FBLN1P23142 703 aa31.79■■■□□ 2.68
RPP38-201ENST00000378197 THSD7AQ9UPZ6 1657 aa31.79■■■□□ 2.68
RPP38-201ENST00000378197 TOM1L2Q6ZVM7 507 aa31.78■■■□□ 2.68
RPP38-201ENST00000378197 TCP11L2Q8N4U5 519 aa31.78■■■□□ 2.68
RPP38-201ENST00000378197 MAP3K19Q56UN5 1328 aa31.77■■■□□ 2.68
RPP38-201ENST00000378197 CSB-PGBD3P0DP91 1061 aa31.76■■■□□ 2.67
RPP38-201ENST00000378197 BARGINQ6ZT62 677 aa31.76■■■□□ 2.67
RPP38-201ENST00000378197 UPF1Q92900 1129 aaKnown RBP eCLIP31.76■■■□□ 2.67
RPP38-201ENST00000378197 CCDC7Q96M83 1385 aa31.74■■■□□ 2.67
RPP38-201ENST00000378197 THRAP3Q9Y2W1 955 aaKnown RBP31.74■■■□□ 2.67
RPP38-201ENST00000378197 KRT27Q7Z3Y8 459 aa31.73■■■□□ 2.67
RPP38-201ENST00000378197 IP6K1Q92551 441 aa31.73■■■□□ 2.67
RPP38-201ENST00000378197 BLMP54132 1417 aaPredicted RBP31.73■■■□□ 2.67
RPP38-201ENST00000378197 WASHC2AQ641Q2 1341 aa31.72■■■□□ 2.67
RPP38-201ENST00000378197 RRS1Q15050 365 aaKnown RBP31.72■■■□□ 2.67
RPP38-201ENST00000378197 ERBB3P21860 1342 aa31.72■■■□□ 2.67
RPP38-201ENST00000378197 AMPHP49418 695 aa31.71■■■□□ 2.67
RPP38-201ENST00000378197 ANKRD24Q8TF21 1146 aa31.7■■■□□ 2.66
RPP38-201ENST00000378197 ANKRD26Q9UPS8 1709 aa31.69■■■□□ 2.66
RPP38-201ENST00000378197 HOXC9P31274 260 aa31.69■■■□□ 2.66
RPP38-201ENST00000378197 CARD10Q9BWT7 1032 aa31.69■■■□□ 2.66
RPP38-201ENST00000378197 RTL1A6NKG5 1358 aa31.67■■■□□ 2.66
RPP38-201ENST00000378197 KNSTRNQ9Y448 316 aa31.65■■■□□ 2.66
RPP38-201ENST00000378197 EP400Q96L91 3159 aa31.64■■■□□ 2.66
RPP38-201ENST00000378197 WNK3Q9BYP7 1800 aa31.64■■■□□ 2.66
RPP38-201ENST00000378197 LTV1Q96GA3 475 aaPredicted RBP31.64■■■□□ 2.66
RPP38-201ENST00000378197 NLRP2Q9NX02 1062 aa31.64■■■□□ 2.66
RPP38-201ENST00000378197 NSD2O96028 1365 aa31.64■■■□□ 2.66
RPP38-201ENST00000378197 PARP4Q9UKK3 1724 aaKnown RBP31.63■■■□□ 2.65
RPP38-201ENST00000378197 PEAK1Q9H792 1746 aa31.63■■■□□ 2.65
RPP38-201ENST00000378197 FAM182BQ5T319 152 aa31.6■■■□□ 2.65
RPP38-201ENST00000378197 EMILIN1Q9Y6C2 1016 aa31.6■■■□□ 2.65
RPP38-201ENST00000378197 FLT4P35916 1363 aa31.6■■■□□ 2.65
RPP38-201ENST00000378197 KIF24Q5T7B8 1368 aa31.6■■■□□ 2.65
RPP38-201ENST00000378197 FAM208AQ9UK61 1670 aaKnown RBP31.6■■■□□ 2.65
RPP38-201ENST00000378197 TNNT2P45379 298 aaPredicted RBP31.59■■■□□ 2.65
RPP38-201ENST00000378197 PDE3BQ13370 1112 aa31.59■■■□□ 2.65
RPP38-201ENST00000378197 DISP2A7MBM2 1401 aa31.58■■■□□ 2.65
RPP38-201ENST00000378197 LRRC37A3O60309 1634 aa31.58■■■□□ 2.65
RPP38-201ENST00000378197 CDCA7Q9BWT1 371 aaPredicted RBP31.58■■■□□ 2.65
RPP38-201ENST00000378197 PER1O15534 1290 aaPredicted RBP31.57■■■□□ 2.64
RPP38-201ENST00000378197 AMER1Q5JTC6 1135 aaPredicted RBP31.57■■■□□ 2.64
RPP38-201ENST00000378197 MAP2P11137 1827 aaKnown RBP31.57■■■□□ 2.64
RPP38-201ENST00000378197 HSP90AB2PQ58FF8 381 aa31.56■■■□□ 2.64
RPP38-201ENST00000378197 INSRP06213 1382 aa31.56■■■□□ 2.64
RPP38-201ENST00000378197 PPM1GO15355 546 aaPredicted RBP31.54■■■□□ 2.64
RPP38-201ENST00000378197 DDB1Q16531 1140 aa31.54■■■□□ 2.64
RPP38-201ENST00000378197 MORC1Q86VD1 984 aa31.54■■■□□ 2.64
RPP38-201ENST00000378197 POLKQ9UBT6 870 aa31.54■■■□□ 2.64
RPP38-201ENST00000378197 CCDC125Q86Z20 511 aa31.53■■■□□ 2.64
RPP38-201ENST00000378197 SMG6Q86US8 1419 aaKnown RBP31.53■■■□□ 2.64
RPP38-201ENST00000378197 RGPD2P0DJD1 1756 aa31.52■■■□□ 2.64
RPP38-201ENST00000378197 ZEB1P37275 1124 aaPredicted RBP31.51■■■□□ 2.63
RPP38-201ENST00000378197 IL2RBP14784 551 aa31.49■■■□□ 2.63
RPP38-201ENST00000378197 FAM196AQ6ZSG2 479 aa31.49■■■□□ 2.63
RPP38-201ENST00000378197 EXOC5O00471 708 aa31.46■■■□□ 2.63
RPP38-201ENST00000378197 NBPF6Q5VWK0 638 aa31.46■■■□□ 2.63
RPP38-201ENST00000378197 NBPF4Q96M43 638 aa31.46■■■□□ 2.63
RPP38-201ENST00000378197 CC2D1BQ5T0F9 858 aaKnown RBP31.46■■■□□ 2.63
RPP38-201ENST00000378197 TNS2Q63HR2 1409 aa31.45■■■□□ 2.63
RPP38-201ENST00000378197 SF3B2Q13435 895 aaKnown RBP31.45■■■□□ 2.62
RPP38-201ENST00000378197 OVOS2A0A0G2JMS6 1433 aa31.43■■■□□ 2.62
RPP38-201ENST00000378197 USHBP1Q8N6Y0 703 aa31.43■■■□□ 2.62
RPP38-201ENST00000378197 RGPD1P0DJD0 1748 aa31.42■■■□□ 2.62
RPP38-201ENST00000378197 MARCH10Q8NA82 808 aaPredicted RBP31.42■■■□□ 2.62
RPP38-201ENST00000378197 NPC1L1Q9UHC9 1359 aa31.42■■■□□ 2.62
RPP38-201ENST00000378197 TRIM37O94972 964 aa31.39■■■□□ 2.62
RPP38-201ENST00000378197 CNGB1Q14028 1251 aaPredicted RBP31.39■■■□□ 2.62
RPP38-201ENST00000378197 DEFB132Q7Z7B7 95 aa31.38■■■□□ 2.61
RPP38-201ENST00000378197 TNS1Q9HBL0 1735 aaKnown RBP31.38■■■□□ 2.61
RPP38-201ENST00000378197 MEGF6O75095 1541 aa31.37■■■□□ 2.61
RPP38-201ENST00000378197 EIF4A2Q14240 407 aaKnown RBP31.36■■■□□ 2.61
RPP38-201ENST00000378197 BAG6P46379 1132 aa31.33■■■□□ 2.61
RPP38-201ENST00000378197 RAPGEF4Q8WZA2 1011 aa31.33■■■□□ 2.61
RPP38-201ENST00000378197 EYA1Q99502 592 aa31.33■■■□□ 2.61
RPP38-201ENST00000378197 BCL9O00512 1426 aa31.33■■■□□ 2.61
RPP38-201ENST00000378197 NCAPD2Q15021 1401 aa31.33■■■□□ 2.61
RPP38-201ENST00000378197 SBF2Q86WG5 1849 aa31.32■■■□□ 2.6
RPP38-201ENST00000378197 TATP17735 454 aaPredicted RBP31.3■■■□□ 2.6
RPP38-201ENST00000378197 MTHFSP49914 203 aa31.29■■■□□ 2.6
RPP38-201ENST00000378197 ZCRB1Q8TBF4 217 aaKnown RBP31.29■■■□□ 2.6
RPP38-201ENST00000378197 DDX54Q8TDD1 881 aaKnown RBP31.28■■■□□ 2.6
RPP38-201ENST00000378197 SHANK3Q9BYB0 1731 aa31.27■■■□□ 2.6
RPP38-201ENST00000378197 APBA3O96018 575 aa31.27■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms