RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 CCDC146Q8IYE0 955 aa13.67□□□□□ -0.22
PCDHGA1-201ENST00000378105 CABP2Q9NPB3 220 aa13.67□□□□□ -0.22
PCDHGA1-201ENST00000378105 CENPJQ9HC77 1338 aaPredicted RBP13.67□□□□□ -0.22
PCDHGA1-201ENST00000378105 CSB-PGBD3P0DP91 1061 aa13.66□□□□□ -0.22
PCDHGA1-201ENST00000378105 EVC2Q86UK5 1308 aa13.66□□□□□ -0.22
PCDHGA1-201ENST00000378105 COL16A1Q07092 1604 aaPredicted RBP13.65□□□□□ -0.22
PCDHGA1-201ENST00000378105 LRRC7Q96NW7 1537 aa13.64□□□□□ -0.23
PCDHGA1-201ENST00000378105 NKTRP30414 1462 aaKnown RBP13.64□□□□□ -0.23
PCDHGA1-201ENST00000378105 KIF7Q2M1P5 1343 aa13.64□□□□□ -0.23
PCDHGA1-201ENST00000378105 SMAP1Q8IYB5 467 aaPredicted RBP13.64□□□□□ -0.23
PCDHGA1-201ENST00000378105 MST1RQ04912 1400 aa13.64□□□□□ -0.23
PCDHGA1-201ENST00000378105 CCER2I3L3R5 266 aa13.64□□□□□ -0.23
PCDHGA1-201ENST00000378105 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.63□□□□□ -0.23
PCDHGA1-201ENST00000378105 NRAPQ86VF7 1730 aa13.63□□□□□ -0.23
PCDHGA1-201ENST00000378105 OS9Q13438 667 aaPredicted RBP13.63□□□□□ -0.23
PCDHGA1-201ENST00000378105 RALBP1Q15311 655 aa13.63□□□□□ -0.23
PCDHGA1-201ENST00000378105 NUTM2GQ5VZR2 741 aa13.62□□□□□ -0.23
PCDHGA1-201ENST00000378105 PRAM1Q96QH2 718 aa13.62□□□□□ -0.23
PCDHGA1-201ENST00000378105 AMPHP49418 695 aa13.61□□□□□ -0.23
PCDHGA1-201ENST00000378105 RGPD5Q99666 1765 aa13.61□□□□□ -0.23
PCDHGA1-201ENST00000378105 NLRP13Q86W25 1043 aa13.61□□□□□ -0.23
PCDHGA1-201ENST00000378105 PRKRIP1Q9H875 184 aaPredicted RBP13.61□□□□□ -0.23
PCDHGA1-201ENST00000378105 KIF1AQ12756 1690 aa13.61□□□□□ -0.23
PCDHGA1-201ENST00000378105 ADAMTS7Q9UKP4 1686 aa13.61□□□□□ -0.23
PCDHGA1-201ENST00000378105 IDI1Q13907 227 aa13.61□□□□□ -0.23
PCDHGA1-201ENST00000378105 RRP7AQ9Y3A4 280 aaKnown RBP13.61□□□□□ -0.23
PCDHGA1-201ENST00000378105 CBX1P83916 185 aa13.6□□□□□ -0.23
PCDHGA1-201ENST00000378105 RGPD2P0DJD1 1756 aa13.6□□□□□ -0.23
PCDHGA1-201ENST00000378105 RBM33Q96EV2 1170 aaKnown RBP13.6□□□□□ -0.23
PCDHGA1-201ENST00000378105 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA1-201ENST00000378105 TPM2P07951 284 aa13.59□□□□□ -0.23
PCDHGA1-201ENST00000378105 THEMISQ8N1K5 641 aaPredicted RBP13.59□□□□□ -0.23
PCDHGA1-201ENST00000378105 GGNBP2Q9H3C7 697 aa13.59□□□□□ -0.23
PCDHGA1-201ENST00000378105 FAM208AQ9UK61 1670 aaKnown RBP13.58□□□□□ -0.24
PCDHGA1-201ENST00000378105 SKAP1Q86WV1 359 aa13.58□□□□□ -0.24
PCDHGA1-201ENST00000378105 DMTNQ08495 405 aa13.58□□□□□ -0.24
PCDHGA1-201ENST00000378105 PMFBP1Q8TBY8 1022 aa13.58□□□□□ -0.24
PCDHGA1-201ENST00000378105 SSH2Q76I76 1423 aa13.58□□□□□ -0.24
PCDHGA1-201ENST00000378105 PTCH1Q13635 1447 aa13.57□□□□□ -0.24
PCDHGA1-201ENST00000378105 GLI3P10071 1580 aa13.57□□□□□ -0.24
PCDHGA1-201ENST00000378105 TRERF1Q96PN7 1200 aa13.57□□□□□ -0.24
PCDHGA1-201ENST00000378105 SLC12A5Q9H2X9 1139 aa13.57□□□□□ -0.24
PCDHGA1-201ENST00000378105 ESPNB1AK53 854 aa13.57□□□□□ -0.24
PCDHGA1-201ENST00000378105 SIPA1L3O60292 1781 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA1-201ENST00000378105 LTN1O94822 1766 aa13.56□□□□□ -0.24
PCDHGA1-201ENST00000378105 CCDC7Q96M83 1385 aa13.56□□□□□ -0.24
PCDHGA1-201ENST00000378105 PSME1Q06323 249 aa13.56□□□□□ -0.24
PCDHGA1-201ENST00000378105 TRIM44Q96DX7 344 aaPredicted RBP13.56□□□□□ -0.24
PCDHGA1-201ENST00000378105 R3HCC1Q9Y3T6 440 aaKnown RBP13.56□□□□□ -0.24
PCDHGA1-201ENST00000378105 MED1Q15648 1581 aaPredicted RBP13.56□□□□□ -0.24
PCDHGA1-201ENST00000378105 ERBB4Q15303 1308 aa13.56□□□□□ -0.24
PCDHGA1-201ENST00000378105 XRCC6P12956 609 aaKnown RBP eCLIP13.56□□□□□ -0.24
PCDHGA1-201ENST00000378105 RTF1Q92541 710 aaKnown RBP13.56□□□□□ -0.24
PCDHGA1-201ENST00000378105 COG3Q96JB2 828 aa13.56□□□□□ -0.24
PCDHGA1-201ENST00000378105 CGNL1Q0VF96 1302 aa13.55□□□□□ -0.24
PCDHGA1-201ENST00000378105 KCNJ4P48050 445 aa13.55□□□□□ -0.24
PCDHGA1-201ENST00000378105 PROSER2Q86WR7 435 aaPredicted RBP13.55□□□□□ -0.24
PCDHGA1-201ENST00000378105 PDE4AP27815 886 aa13.55□□□□□ -0.24
PCDHGA1-201ENST00000378105 RIPK4P57078 832 aa13.54□□□□□ -0.24
PCDHGA1-201ENST00000378105 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.54□□□□□ -0.24
PCDHGA1-201ENST00000378105 ZSCAN20P17040 1043 aaPredicted RBP13.53□□□□□ -0.24
PCDHGA1-201ENST00000378105 SCAF11Q99590 1463 aaKnown RBP13.53□□□□□ -0.24
PCDHGA1-201ENST00000378105 ADGRF5Q8IZF2 1346 aa13.53□□□□□ -0.24
PCDHGA1-201ENST00000378105 PLCH1Q4KWH8 1693 aa13.53□□□□□ -0.24
PCDHGA1-201ENST00000378105 L1TD1Q5T7N2 865 aaKnown RBP13.53□□□□□ -0.24
PCDHGA1-201ENST00000378105 ATP7BP35670 1465 aa13.53□□□□□ -0.24
PCDHGA1-201ENST00000378105 WAPLQ7Z5K2 1190 aa13.53□□□□□ -0.24
PCDHGA1-201ENST00000378105 TMEM2Q9UHN6 1383 aa13.53□□□□□ -0.24
PCDHGA1-201ENST00000378105 METP08581 1390 aa13.52□□□□□ -0.24
PCDHGA1-201ENST00000378105 ATF3P18847 181 aa13.52□□□□□ -0.24
PCDHGA1-201ENST00000378105 ANKLE2Q86XL3 938 aa13.52□□□□□ -0.25
PCDHGA1-201ENST00000378105 ZNF330Q9Y3S2 320 aaPredicted RBP13.52□□□□□ -0.25
PCDHGA1-201ENST00000378105 MYBBP1AQ9BQG0 1328 aaKnown RBP13.52□□□□□ -0.25
PCDHGA1-201ENST00000378105 PLEKHG1Q9ULL1 1385 aa13.52□□□□□ -0.25
PCDHGA1-201ENST00000378105 TNNT1P13805 278 aa13.52□□□□□ -0.25
PCDHGA1-201ENST00000378105 MYH16Q9H6N6 1097 aa13.52□□□□□ -0.25
PCDHGA1-201ENST00000378105 CLGNO14967 610 aa13.51□□□□□ -0.25
PCDHGA1-201ENST00000378105 ESCO1Q5FWF5 840 aa13.5□□□□□ -0.25
PCDHGA1-201ENST00000378105 LOC102724159A0A0B4J2E5 919 aa13.5□□□□□ -0.25
PCDHGA1-201ENST00000378105 PWP2Q15269 919 aaKnown RBP13.5□□□□□ -0.25
PCDHGA1-201ENST00000378105 ELL2O00472 640 aaPredicted RBP13.5□□□□□ -0.25
PCDHGA1-201ENST00000378105 CABP1Q9NZU7 370 aa13.49□□□□□ -0.25
PCDHGA1-201ENST00000378105 GOLGA6L3A6NEY3 463 aa13.49□□□□□ -0.25
PCDHGA1-201ENST00000378105 NLRP6P59044 892 aa13.49□□□□□ -0.25
PCDHGA1-201ENST00000378105 SLKQ9H2G2 1235 aaPredicted RBP13.49□□□□□ -0.25
PCDHGA1-201ENST00000378105 TRIM6-TRIM34B2RNG4 842 aa13.48□□□□□ -0.25
PCDHGA1-201ENST00000378105 IRX5P78411 483 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA1-201ENST00000378105 XPCQ01831 940 aaPredicted RBP13.48□□□□□ -0.25
PCDHGA1-201ENST00000378105 TRIM34Q9BYJ4 488 aa13.48□□□□□ -0.25
PCDHGA1-201ENST00000378105 APAF1O14727 1248 aa13.48□□□□□ -0.25
PCDHGA1-201ENST00000378105 CDK19Q9BWU1 502 aa13.48□□□□□ -0.25
PCDHGA1-201ENST00000378105 RBM25P49756 843 aaKnown RBP13.48□□□□□ -0.25
PCDHGA1-201ENST00000378105 SBNO2Q9Y2G9 1366 aa13.47□□□□□ -0.25
PCDHGA1-201ENST00000378105 PTMAP06454 111 aaKnown RBP13.47□□□□□ -0.25
PCDHGA1-201ENST00000378105 TESK2Q96S53 571 aa13.47□□□□□ -0.25
PCDHGA1-201ENST00000378105 PLCD4Q9BRC7 762 aa13.47□□□□□ -0.25
PCDHGA1-201ENST00000378105 HMOX1P09601 288 aa13.46□□□□□ -0.25
PCDHGA1-201ENST00000378105 LTKP29376 864 aa13.46□□□□□ -0.25
PCDHGA1-201ENST00000378105 AHDC1Q5TGY3 1603 aaPredicted RBP13.46□□□□□ -0.25
PCDHGA1-201ENST00000378105 NFAT5O94916 1531 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms