RNA–Protein interactions for RNA: ENST00000376745.8

PPP1CA-203, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CA, Length 1,476 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-203ENST00000376745 LTN1O94822 1766 aa45.51■■■■■ 4.88
PPP1CA-203ENST00000376745 COL5A2P05997 1499 aaPredicted RBP45.51■■■■■ 4.88
PPP1CA-203ENST00000376745 AMER1Q5JTC6 1135 aaPredicted RBP45.5■■■■■ 4.87
PPP1CA-203ENST00000376745 STRN4Q9NRL3 753 aa45.49■■■■■ 4.87
PPP1CA-203ENST00000376745 EVA1CP58658 441 aa45.49■■■■■ 4.87
PPP1CA-203ENST00000376745 GLI3P10071 1580 aa45.48■■■■■ 4.87
PPP1CA-203ENST00000376745 MAP3K19Q56UN5 1328 aa45.48■■■■■ 4.87
PPP1CA-203ENST00000376745 CDK12Q9NYV4 1490 aaPredicted RBP45.48■■■■■ 4.87
PPP1CA-203ENST00000376745 ANKRD26Q9UPS8 1709 aa45.47■■■■■ 4.87
PPP1CA-203ENST00000376745 SPATA31A5Q5VU36 1347 aa45.46■■■■■ 4.87
PPP1CA-203ENST00000376745 SPATA31A7Q8IWB4 1347 aa45.46■■■■■ 4.87
PPP1CA-203ENST00000376745 LARP1Q6PKG0 1096 aaKnown RBP45.44■■■■■ 4.87
PPP1CA-203ENST00000376745 CCDC9Q9Y3X0 531 aaKnown RBP45.44■■■■■ 4.87
PPP1CA-203ENST00000376745 RRS1Q15050 365 aaKnown RBP45.42■■■■■ 4.86
PPP1CA-203ENST00000376745 IP6K1Q92551 441 aa45.42■■■■■ 4.86
PPP1CA-203ENST00000376745 RGPD5Q99666 1765 aa45.42■■■■■ 4.86
PPP1CA-203ENST00000376745 SPATA31A1Q5TZJ5 1347 aa45.4■■■■■ 4.86
PPP1CA-203ENST00000376745 RGS12O14924 1447 aa45.38■■■■■ 4.85
PPP1CA-203ENST00000376745 WDR17Q8IZU2 1322 aa45.37■■■■■ 4.85
PPP1CA-203ENST00000376745 ONECUT3O60422 494 aaPredicted RBP45.37■■■■■ 4.85
PPP1CA-203ENST00000376745 BLMP54132 1417 aaPredicted RBP45.37■■■■■ 4.85
PPP1CA-203ENST00000376745 NPC1L1Q9UHC9 1359 aa45.37■■■■■ 4.85
PPP1CA-203ENST00000376745 RTL1A6NKG5 1358 aa45.36■■■■■ 4.85
PPP1CA-203ENST00000376745 HOXC9P31274 260 aa45.36■■■■■ 4.85
PPP1CA-203ENST00000376745 AMPHP49418 695 aa45.36■■■■■ 4.85
PPP1CA-203ENST00000376745 CRB1P82279 1406 aa45.35■■■■■ 4.85
PPP1CA-203ENST00000376745 ERBB3P21860 1342 aa45.34■■■■■ 4.85
PPP1CA-203ENST00000376745 KIF24Q5T7B8 1368 aa45.34■■■■■ 4.85
PPP1CA-203ENST00000376745 MORC1Q86VD1 984 aa45.33■■■■■ 4.85
PPP1CA-203ENST00000376745 EMILIN1Q9Y6C2 1016 aa45.3■■■■■ 4.84
PPP1CA-203ENST00000376745 TNNT2P45379 298 aaPredicted RBP45.29■■■■■ 4.84
PPP1CA-203ENST00000376745 POLKQ9UBT6 870 aa45.29■■■■■ 4.84
PPP1CA-203ENST00000376745 TOM1L2Q6ZVM7 507 aa45.29■■■■■ 4.84
PPP1CA-203ENST00000376745 PEAK1Q9H792 1746 aa45.29■■■■■ 4.84
PPP1CA-203ENST00000376745 ANKRD24Q8TF21 1146 aa45.28■■■■■ 4.84
PPP1CA-203ENST00000376745 USP35Q9P2H5 1018 aa45.28■■■■■ 4.84
PPP1CA-203ENST00000376745 FAM98CQ17RN3 349 aaKnown RBP45.27■■■■■ 4.84
PPP1CA-203ENST00000376745 FLT4P35916 1363 aa45.26■■■■■ 4.84
PPP1CA-203ENST00000376745 MAP2P11137 1827 aaKnown RBP45.26■■■■■ 4.84
PPP1CA-203ENST00000376745 CSB-PGBD3P0DP91 1061 aa45.26■■■■■ 4.84
PPP1CA-203ENST00000376745 CC2D1BQ5T0F9 858 aaKnown RBP45.26■■■■■ 4.84
PPP1CA-203ENST00000376745 TCP11L2Q8N4U5 519 aa45.26■■■■■ 4.84
PPP1CA-203ENST00000376745 BARGINQ6ZT62 677 aa45.25■■■■■ 4.83
PPP1CA-203ENST00000376745 THRAP3Q9Y2W1 955 aaKnown RBP45.25■■■■■ 4.83
PPP1CA-203ENST00000376745 HSP90AB2PQ58FF8 381 aa45.23■■■■■ 4.83
PPP1CA-203ENST00000376745 SEPT12Q8IYM1 358 aa45.23■■■■■ 4.83
PPP1CA-203ENST00000376745 CARD10Q9BWT7 1032 aa45.23■■■■■ 4.83
PPP1CA-203ENST00000376745 INSRP06213 1382 aa45.22■■■■■ 4.83
PPP1CA-203ENST00000376745 THSD7AQ9UPZ6 1657 aa45.18■■■■■ 4.82
PPP1CA-203ENST00000376745 SMG6Q86US8 1419 aaKnown RBP45.18■■■■■ 4.82
PPP1CA-203ENST00000376745 DDX10Q13206 875 aaKnown RBP45.17■■■■■ 4.82
PPP1CA-203ENST00000376745 LTV1Q96GA3 475 aaPredicted RBP45.17■■■■■ 4.82
PPP1CA-203ENST00000376745 PPM1GO15355 546 aaPredicted RBP45.17■■■■■ 4.82
PPP1CA-203ENST00000376745 NLRP2Q9NX02 1062 aa45.15■■■■■ 4.82
PPP1CA-203ENST00000376745 FAM208AQ9UK61 1670 aaKnown RBP45.12■■■■■ 4.81
PPP1CA-203ENST00000376745 ZNF316A6NFI3 1004 aaPredicted RBP45.11■■■■■ 4.81
PPP1CA-203ENST00000376745 A0A0G2JS52 829 aa45.09■■■■■ 4.81
PPP1CA-203ENST00000376745 MYT1Q01538 1121 aa45.09■■■■■ 4.81
PPP1CA-203ENST00000376745 CNGB1Q14028 1251 aaPredicted RBP45.09■■■■■ 4.81
PPP1CA-203ENST00000376745 BRWD3Q6RI45 1802 aa45.08■■■■■ 4.81
PPP1CA-203ENST00000376745 DISP2A7MBM2 1401 aa45.05■■■■■ 4.8
PPP1CA-203ENST00000376745 SOCS7O14512 581 aa45.04■■■■■ 4.8
PPP1CA-203ENST00000376745 NBPF6Q5VWK0 638 aa45.04■■■■■ 4.8
PPP1CA-203ENST00000376745 NBPF4Q96M43 638 aa45.04■■■■■ 4.8
PPP1CA-203ENST00000376745 CDCA7Q9BWT1 371 aaPredicted RBP45.04■■■■■ 4.8
PPP1CA-203ENST00000376745 KRT27Q7Z3Y8 459 aa45.02■■■■■ 4.8
PPP1CA-203ENST00000376745 WNK3Q9BYP7 1800 aa45.01■■■■■ 4.8
PPP1CA-203ENST00000376745 RGPD2P0DJD1 1756 aa45.01■■■■■ 4.8
PPP1CA-203ENST00000376745 PARP4Q9UKK3 1724 aaKnown RBP45■■■■■ 4.8
PPP1CA-203ENST00000376745 MTHFSP49914 203 aa45■■■■■ 4.79
PPP1CA-203ENST00000376745 EIF4A2Q14240 407 aaKnown RBP44.97■■■■■ 4.79
PPP1CA-203ENST00000376745 IL2RBP14784 551 aa44.94■■■■■ 4.78
PPP1CA-203ENST00000376745 LRRC37A3O60309 1634 aa44.92■■■■■ 4.78
PPP1CA-203ENST00000376745 PARD3Q8TEW0 1356 aa44.92■■■■■ 4.78
PPP1CA-203ENST00000376745 NCAPD2Q15021 1401 aa44.91■■■■■ 4.78
PPP1CA-203ENST00000376745 DDB1Q16531 1140 aa44.91■■■■■ 4.78
PPP1CA-203ENST00000376745 EYA1Q99502 592 aa44.91■■■■■ 4.78
PPP1CA-203ENST00000376745 USHBP1Q8N6Y0 703 aa44.9■■■■■ 4.78
PPP1CA-203ENST00000376745 PDE3BQ13370 1112 aa44.88■■■■■ 4.78
PPP1CA-203ENST00000376745 PPP2R1AP30153 589 aa44.87■■■■■ 4.77
PPP1CA-203ENST00000376745 EP400Q96L91 3159 aa44.87■■■■■ 4.77
PPP1CA-203ENST00000376745 EXOC5O00471 708 aa44.84■■■■■ 4.77
PPP1CA-203ENST00000376745 IL13P35225 146 aa44.84■■■■■ 4.77
PPP1CA-203ENST00000376745 FAM182BQ5T319 152 aa44.83■■■■■ 4.77
PPP1CA-203ENST00000376745 MEGF6O75095 1541 aa44.82■■■■■ 4.77
PPP1CA-203ENST00000376745 TNS2Q63HR2 1409 aa44.82■■■■■ 4.77
PPP1CA-203ENST00000376745 UPF1Q92900 1129 aaKnown RBP eCLIP44.82■■■■■ 4.774e-7■■■■■ 28.3
PPP1CA-203ENST00000376745 IGSF1Q8N6C5 1336 aa44.81■■■■■ 4.76
PPP1CA-203ENST00000376745 RALBP1Q15311 655 aa44.78■■■■■ 4.76
PPP1CA-203ENST00000376745 COL3A1P02461 1466 aaPredicted RBP44.78■■■■■ 4.76
PPP1CA-203ENST00000376745 OVOS2A0A0G2JMS6 1433 aa44.77■■■■■ 4.76
PPP1CA-203ENST00000376745 MARCH10Q8NA82 808 aaPredicted RBP44.77■■■■■ 4.76
PPP1CA-203ENST00000376745 RAPGEF4Q8WZA2 1011 aa44.77■■■■■ 4.76
PPP1CA-203ENST00000376745 FAM196AQ6ZSG2 479 aa44.75■■■■■ 4.75
PPP1CA-203ENST00000376745 RGPD1P0DJD0 1748 aa44.74■■■■■ 4.75
PPP1CA-203ENST00000376745 DIAPH1O60610 1272 aaKnown RBP44.73■■■■■ 4.75
PPP1CA-203ENST00000376745 TATP17735 454 aaPredicted RBP44.72■■■■■ 4.75
PPP1CA-203ENST00000376745 ZCRB1Q8TBF4 217 aaKnown RBP44.69■■■■■ 4.74
PPP1CA-203ENST00000376745 BCL9O00512 1426 aa44.67■■■■■ 4.74
PPP1CA-203ENST00000376745 CFAP53Q96M91 514 aa44.67■■■■■ 4.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms