RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 CCDC9Q9Y3X0 531 aaKnown RBP28.43■■■□□ 2.14
HLA-C-201ENST00000376228 GCP02774 474 aa28.42■■■□□ 2.14
HLA-C-201ENST00000376228 TTC21AQ8NDW8 1320 aa28.41■■■□□ 2.14
HLA-C-201ENST00000376228 VPS72Q15906 364 aa28.4■■■□□ 2.14
HLA-C-201ENST00000376228 ANKRD26Q9UPS8 1709 aa28.39■■■□□ 2.14
HLA-C-201ENST00000376228 LMO7Q8WWI1 1683 aa28.38■■■□□ 2.13
HLA-C-201ENST00000376228 ZBTB7CA1YPR0 619 aa28.38■■■□□ 2.13
HLA-C-201ENST00000376228 ZRANB1Q9UGI0 708 aa28.38■■■□□ 2.13
HLA-C-201ENST00000376228 SOX12O15370 315 aa28.37■■■□□ 2.13
HLA-C-201ENST00000376228 BRWD3Q6RI45 1802 aa28.36■■■□□ 2.13
HLA-C-201ENST00000376228 NME9Q86XW9 330 aa28.36■■■□□ 2.13
HLA-C-201ENST00000376228 CPDO75976 1380 aa28.36■■■□□ 2.13
HLA-C-201ENST00000376228 EDC4Q6P2E9 1401 aaKnown RBP28.36■■■□□ 2.13
HLA-C-201ENST00000376228 USP54Q70EL1 1684 aa28.35■■■□□ 2.13
HLA-C-201ENST00000376228 ZBED9Q6R2W3 1325 aa28.35■■■□□ 2.13
HLA-C-201ENST00000376228 CAMTA1Q9Y6Y1 1673 aa28.35■■■□□ 2.13
HLA-C-201ENST00000376228 STRN4Q9NRL3 753 aa28.34■■■□□ 2.13
HLA-C-201ENST00000376228 KIF20BQ96Q89 1820 aa28.32■■■□□ 2.12
HLA-C-201ENST00000376228 EP400Q96L91 3159 aa28.31■■■□□ 2.12
HLA-C-201ENST00000376228 RGPD5Q99666 1765 aa28.31■■■□□ 2.12
HLA-C-201ENST00000376228 MORC1Q86VD1 984 aa28.31■■■□□ 2.12
HLA-C-201ENST00000376228 COL18A1P39060 1754 aa28.3■■■□□ 2.12
HLA-C-201ENST00000376228 NFAT5O94916 1531 aa28.3■■■□□ 2.12
HLA-C-201ENST00000376228 USP31Q70CQ4 1352 aa28.28■■■□□ 2.12
HLA-C-201ENST00000376228 LTN1O94822 1766 aa28.28■■■□□ 2.12
HLA-C-201ENST00000376228 SPATA31A5Q5VU36 1347 aa28.28■■■□□ 2.12
HLA-C-201ENST00000376228 SPATA31A7Q8IWB4 1347 aa28.28■■■□□ 2.12
HLA-C-201ENST00000376228 EVA1CP58658 441 aa28.27■■■□□ 2.12
HLA-C-201ENST00000376228 FAM98CQ17RN3 349 aaKnown RBP28.27■■■□□ 2.12
HLA-C-201ENST00000376228 SEPT12Q8IYM1 358 aa28.27■■■□□ 2.12
HLA-C-201ENST00000376228 KCNH5Q8NCM2 988 aa28.27■■■□□ 2.12
HLA-C-201ENST00000376228 UPF1Q92900 1129 aaKnown RBP eCLIP28.26■■■□□ 2.11
HLA-C-201ENST00000376228 BLMP54132 1417 aaPredicted RBP28.25■■■□□ 2.11
HLA-C-201ENST00000376228 A0A0G2JS52 829 aa28.25■■■□□ 2.11
HLA-C-201ENST00000376228 MYT1Q01538 1121 aa28.25■■■□□ 2.11
HLA-C-201ENST00000376228 COL5A2P05997 1499 aaPredicted RBP28.25■■■□□ 2.11
HLA-C-201ENST00000376228 AATKQ6ZMQ8 1374 aa28.24■■■□□ 2.11
HLA-C-201ENST00000376228 OVOS2A0A0J9YW53 1432 aa28.24■■■□□ 2.11
HLA-C-201ENST00000376228 OVOS2Q6IE36 1432 aa28.24■■■□□ 2.11
HLA-C-201ENST00000376228 FYB1O15117 783 aa28.23■■■□□ 2.11
HLA-C-201ENST00000376228 LARP1Q6PKG0 1096 aaKnown RBP28.23■■■□□ 2.11
HLA-C-201ENST00000376228 USP35Q9P2H5 1018 aa28.23■■■□□ 2.11
HLA-C-201ENST00000376228 SPATA31A1Q5TZJ5 1347 aa28.23■■■□□ 2.11
HLA-C-201ENST00000376228 ARHGEF25Q86VW2 580 aa28.23■■■□□ 2.11
HLA-C-201ENST00000376228 ONECUT3O60422 494 aaPredicted RBP28.22■■■□□ 2.11
HLA-C-201ENST00000376228 AXIN2Q9Y2T1 843 aa28.21■■■□□ 2.11
HLA-C-201ENST00000376228 THSD7AQ9UPZ6 1657 aa28.21■■■□□ 2.11
HLA-C-201ENST00000376228 GTF3C3Q9Y5Q9 886 aa28.18■■■□□ 2.1
HLA-C-201ENST00000376228 WDR43Q15061 677 aaKnown RBP eCLIP28.16■■■□□ 2.1
HLA-C-201ENST00000376228 COG3Q96JB2 828 aa28.15■■■□□ 2.1
HLA-C-201ENST00000376228 GGNBP2Q9H3C7 697 aa28.15■■■□□ 2.1
HLA-C-201ENST00000376228 CRB1P82279 1406 aa28.14■■■□□ 2.1
HLA-C-201ENST00000376228 ADAMTS8Q9UP79 889 aa28.14■■■□□ 2.1
HLA-C-201ENST00000376228 KRT27Q7Z3Y8 459 aa28.13■■■□□ 2.09
HLA-C-201ENST00000376228 ABCC6O95255 1503 aa28.13■■■□□ 2.09
HLA-C-201ENST00000376228 FBLN1P23142 703 aa28.12■■■□□ 2.09
HLA-C-201ENST00000376228 WNK3Q9BYP7 1800 aa28.11■■■□□ 2.09
HLA-C-201ENST00000376228 TOM1L2Q6ZVM7 507 aa28.11■■■□□ 2.09
HLA-C-201ENST00000376228 TCP11L2Q8N4U5 519 aa28.11■■■□□ 2.09
HLA-C-201ENST00000376228 MTHFSP49914 203 aa28.1■■■□□ 2.09
HLA-C-201ENST00000376228 CFAP53Q96M91 514 aa28.1■■■□□ 2.09
HLA-C-201ENST00000376228 WDR17Q8IZU2 1322 aa28.09■■■□□ 2.09
HLA-C-201ENST00000376228 CSB-PGBD3P0DP91 1061 aa28.08■■■□□ 2.09
HLA-C-201ENST00000376228 FAM182BQ5T319 152 aa28.08■■■□□ 2.09
HLA-C-201ENST00000376228 BARGINQ6ZT62 677 aa28.08■■■□□ 2.09
HLA-C-201ENST00000376228 TNNT2P45379 298 aaPredicted RBP28.07■■■□□ 2.08
HLA-C-201ENST00000376228 PARP4Q9UKK3 1724 aaKnown RBP28.06■■■□□ 2.08
HLA-C-201ENST00000376228 SMG6Q86US8 1419 aaKnown RBP28.05■■■□□ 2.08
HLA-C-201ENST00000376228 THRAP3Q9Y2W1 955 aaKnown RBP28.05■■■□□ 2.08
HLA-C-201ENST00000376228 MAP2P11137 1827 aaKnown RBP28.05■■■□□ 2.08
HLA-C-201ENST00000376228 PDE3BQ13370 1112 aa28.04■■■□□ 2.08
HLA-C-201ENST00000376228 MAP3K19Q56UN5 1328 aa28.04■■■□□ 2.08
HLA-C-201ENST00000376228 COL3A1P02461 1466 aaPredicted RBP28.03■■■□□ 2.08
HLA-C-201ENST00000376228 LRRC37A3O60309 1634 aa28.02■■■□□ 2.08
HLA-C-201ENST00000376228 ERBB3P21860 1342 aa28.02■■■□□ 2.08
HLA-C-201ENST00000376228 RRS1Q15050 365 aaKnown RBP28.02■■■□□ 2.08
HLA-C-201ENST00000376228 NGEFQ8N5V2 710 aa28.02■■■□□ 2.08
HLA-C-201ENST00000376228 ANKRD24Q8TF21 1146 aa28■■■□□ 2.07
HLA-C-201ENST00000376228 RGPD2P0DJD1 1756 aa27.99■■■□□ 2.07
HLA-C-201ENST00000376228 IP6K1Q92551 441 aa27.99■■■□□ 2.07
HLA-C-201ENST00000376228 CARD10Q9BWT7 1032 aa27.99■■■□□ 2.07
HLA-C-201ENST00000376228 PEAK1Q9H792 1746 aa27.99■■■□□ 2.07
HLA-C-201ENST00000376228 AMPHP49418 695 aa27.98■■■□□ 2.07
HLA-C-201ENST00000376228 LTV1Q96GA3 475 aaPredicted RBP27.98■■■□□ 2.07
HLA-C-201ENST00000376228 HOXC9P31274 260 aa27.97■■■□□ 2.07
HLA-C-201ENST00000376228 NLRP2Q9NX02 1062 aa27.97■■■□□ 2.07
HLA-C-201ENST00000376228 NUDCQ9Y266 331 aa27.97■■■□□ 2.07
HLA-C-201ENST00000376228 FAM208AQ9UK61 1670 aaKnown RBP27.96■■■□□ 2.07
HLA-C-201ENST00000376228 RGPD1P0DJD0 1748 aa27.95■■■□□ 2.06
HLA-C-201ENST00000376228 CCDC125Q86Z20 511 aa27.94■■■□□ 2.06
HLA-C-201ENST00000376228 POLKQ9UBT6 870 aa27.94■■■□□ 2.06
HLA-C-201ENST00000376228 DISP2A7MBM2 1401 aa27.93■■■□□ 2.06
HLA-C-201ENST00000376228 TNS1Q9HBL0 1735 aaKnown RBP27.92■■■□□ 2.06
HLA-C-201ENST00000376228 RTL1A6NKG5 1358 aa27.92■■■□□ 2.06
HLA-C-201ENST00000376228 NCBP3Q53F19 620 aaKnown RBP27.92■■■□□ 2.06
HLA-C-201ENST00000376228 DDB1Q16531 1140 aa27.91■■■□□ 2.06
HLA-C-201ENST00000376228 ZNF521Q96K83 1311 aa27.9■■■□□ 2.06
HLA-C-201ENST00000376228 SF3B2Q13435 895 aaKnown RBP27.9■■■□□ 2.06
HLA-C-201ENST00000376228 DEFB132Q7Z7B7 95 aa27.89■■■□□ 2.06
HLA-C-201ENST00000376228 EMILIN1Q9Y6C2 1016 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms