RNA–Protein interactions for RNA: ENST00000376093.6

LST1-208, leukocyte specific transcript 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LST1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-208ENST00000376093 TYW1BQ6NUM6 668 aa17.85■□□□□ 0.45
LST1-208ENST00000376093 COL16A1Q07092 1604 aaPredicted RBP17.84■□□□□ 0.45
LST1-208ENST00000376093 HAP1P54257 671 aaPredicted RBP17.84■□□□□ 0.45
LST1-208ENST00000376093 LRP6O75581 1613 aa17.83■□□□□ 0.45
LST1-208ENST00000376093 SETBP1Q9Y6X0 1596 aa17.83■□□□□ 0.45
LST1-208ENST00000376093 NEXMIFQ5QGS0 1516 aa17.83■□□□□ 0.45
LST1-208ENST00000376093 TK2O00142 265 aa17.83■□□□□ 0.44
LST1-208ENST00000376093 ADGRD1Q6QNK2 874 aa17.83■□□□□ 0.44
LST1-208ENST00000376093 DDX12PQ92771 950 aa17.83■□□□□ 0.44
LST1-208ENST00000376093 FBXW7Q969H0 707 aa17.83■□□□□ 0.44
LST1-208ENST00000376093 EPAS1Q99814 870 aa17.83■□□□□ 0.44
LST1-208ENST00000376093 PTPREP23469 700 aa17.82■□□□□ 0.44
LST1-208ENST00000376093 SLAIN2Q9P270 581 aa17.82■□□□□ 0.44
LST1-208ENST00000376093 C14orf37Q86TY3 774 aa17.81■□□□□ 0.44
LST1-208ENST00000376093 ARHGEF1Q92888 912 aaKnown RBP17.81■□□□□ 0.44
LST1-208ENST00000376093 XRN1Q8IZH2 1706 aaKnown RBP17.81■□□□□ 0.44
LST1-208ENST00000376093 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.81■□□□□ 0.44
LST1-208ENST00000376093 PTPRUQ92729 1446 aa17.81■□□□□ 0.44
LST1-208ENST00000376093 PIK3R4Q99570 1358 aa17.8■□□□□ 0.44
LST1-208ENST00000376093 MEX3CQ5U5Q3 659 aaKnown RBP17.8■□□□□ 0.44
LST1-208ENST00000376093 HRO43593 1189 aa17.78■□□□□ 0.44
LST1-208ENST00000376093 AMOTL2Q9Y2J4 779 aa17.78■□□□□ 0.44
LST1-208ENST00000376093 ZNF772Q68DY9 489 aaPredicted RBP17.77■□□□□ 0.44
LST1-208ENST00000376093 SLC4A5Q9BY07 1137 aa17.77■□□□□ 0.44
LST1-208ENST00000376093 SPATA31A6Q5VVP1 1343 aa17.76■□□□□ 0.43
LST1-208ENST00000376093 NCOA3Q9Y6Q9 1424 aa17.76■□□□□ 0.43
LST1-208ENST00000376093 SHPRHQ149N8 1683 aa17.75■□□□□ 0.43
LST1-208ENST00000376093 ZBED2Q9BTP6 218 aa17.75■□□□□ 0.43
LST1-208ENST00000376093 KDM2AQ9Y2K7 1162 aa17.75■□□□□ 0.43
LST1-208ENST00000376093 PPLO60437 1756 aa17.75■□□□□ 0.43
LST1-208ENST00000376093 METP08581 1390 aa17.75■□□□□ 0.43
LST1-208ENST00000376093 VPS9D1Q9Y2B5 631 aa17.74■□□□□ 0.43
LST1-208ENST00000376093 PPP1R3GB7ZBB8 358 aa17.73■□□□□ 0.43
LST1-208ENST00000376093 PRIM1P49642 420 aaKnown RBP17.73■□□□□ 0.43
LST1-208ENST00000376093 EN1Q05925 392 aaPredicted RBP17.73■□□□□ 0.43
LST1-208ENST00000376093 NBR1Q14596 966 aa17.73■□□□□ 0.43
LST1-208ENST00000376093 COL9A1P20849 921 aa17.72■□□□□ 0.43
LST1-208ENST00000376093 AHDC1Q5TGY3 1603 aaPredicted RBP17.72■□□□□ 0.43
LST1-208ENST00000376093 ATF3P18847 181 aa17.71■□□□□ 0.43
LST1-208ENST00000376093 RXRBP28702 533 aa17.71■□□□□ 0.43
LST1-208ENST00000376093 C19orf44Q9H6X5 657 aa17.71■□□□□ 0.43
LST1-208ENST00000376093 NALCNQ8IZF0 1738 aa17.71■□□□□ 0.43
LST1-208ENST00000376093 C6orf132Q5T0Z8 1188 aa17.7■□□□□ 0.42
LST1-208ENST00000376093 RNF166Q96A37 237 aaPredicted RBP17.7■□□□□ 0.42
LST1-208ENST00000376093 CCDC144AA2RUR9 1427 aa17.68■□□□□ 0.42
LST1-208ENST00000376093 CDK12Q9NYV4 1490 aaPredicted RBP17.68■□□□□ 0.42
LST1-208ENST00000376093 DCCP43146 1447 aa17.67■□□□□ 0.42
LST1-208ENST00000376093 NUTM2BA6NNL0 878 aaPredicted RBP17.67■□□□□ 0.42
LST1-208ENST00000376093 NUTM2EB1AL46 878 aaPredicted RBP17.67■□□□□ 0.42
LST1-208ENST00000376093 OSBPP22059 807 aa17.67■□□□□ 0.42
LST1-208ENST00000376093 NUTM2AQ8IVF1 878 aaPredicted RBP17.67■□□□□ 0.42
LST1-208ENST00000376093 IFT172Q9UG01 1749 aa17.67■□□□□ 0.42
LST1-208ENST00000376093 GRXCR2A6NFK2 248 aa17.66■□□□□ 0.42
LST1-208ENST00000376093 MPHOSPH9Q99550 1183 aa17.66■□□□□ 0.42
LST1-208ENST00000376093 ADGRL3Q9HAR2 1447 aa17.65■□□□□ 0.42
LST1-208ENST00000376093 RPGRIP1LQ68CZ1 1315 aa17.65■□□□□ 0.42
LST1-208ENST00000376093 ASXL1Q8IXJ9 1541 aa17.64■□□□□ 0.41
LST1-208ENST00000376093 BHMG1C9JSJ3 638 aaPredicted RBP17.64■□□□□ 0.41
LST1-208ENST00000376093 TSR1Q2NL82 804 aaKnown RBP17.64■□□□□ 0.41
LST1-208ENST00000376093 AFF2P51816 1311 aa17.64■□□□□ 0.41
LST1-208ENST00000376093 MST1RQ04912 1400 aa17.64■□□□□ 0.41
LST1-208ENST00000376093 SETD5Q9C0A6 1442 aa17.64■□□□□ 0.41
LST1-208ENST00000376093 RGL3Q3MIN7 710 aa17.62■□□□□ 0.41
LST1-208ENST00000376093 BRINP3Q76B58 766 aa17.62■□□□□ 0.41
LST1-208ENST00000376093 RGS12O14924 1447 aa17.62■□□□□ 0.41
LST1-208ENST00000376093 PTCH1Q13635 1447 aa17.62■□□□□ 0.41
LST1-208ENST00000376093 NHSL1Q5SYE7 1610 aa17.61■□□□□ 0.41
LST1-208ENST00000376093 MLLT3P42568 568 aaPredicted RBP17.61■□□□□ 0.41
LST1-208ENST00000376093 SPATA31E1Q6ZUB1 1445 aa17.61■□□□□ 0.41
LST1-208ENST00000376093 MAP3K7O43318 606 aa17.6■□□□□ 0.41
LST1-208ENST00000376093 PROX2Q3B8N5 592 aa17.6■□□□□ 0.41
LST1-208ENST00000376093 VSIG10Q8N0Z9 540 aa17.6■□□□□ 0.41
LST1-208ENST00000376093 ROBO2Q9HCK4 1378 aa17.6■□□□□ 0.41
LST1-208ENST00000376093 RAB3GAP2Q9H2M9 1393 aa17.59■□□□□ 0.41
LST1-208ENST00000376093 ADGRF5Q8IZF2 1346 aa17.59■□□□□ 0.41
LST1-208ENST00000376093 PRAG1Q86YV5 1406 aa17.56■□□□□ 0.4
LST1-208ENST00000376093 C8orf37Q96NL8 207 aa17.56■□□□□ 0.4
LST1-208ENST00000376093 ANKRD30BQ9BXX2 1392 aa17.55■□□□□ 0.4
LST1-208ENST00000376093 RBM6P78332 1123 aaKnown RBP17.54■□□□□ 0.4
LST1-208ENST00000376093 DDX17Q92841 729 aaKnown RBP17.54■□□□□ 0.4
LST1-208ENST00000376093 QTRT2Q9H974 415 aaKnown RBP17.54■□□□□ 0.4
LST1-208ENST00000376093 KNDC1Q76NI1 1749 aa17.54■□□□□ 0.4
LST1-208ENST00000376093 C1orf167Q5SNV9 1468 aa17.54■□□□□ 0.4
LST1-208ENST00000376093 SRCAPQ6ZRS2 3230 aa17.54■□□□□ 0.4
LST1-208ENST00000376093 ACIN1Q9UKV3 1341 aaKnown RBP17.53■□□□□ 0.4
LST1-208ENST00000376093 CDHR5Q9HBB8 845 aa17.53■□□□□ 0.4
LST1-208ENST00000376093 RABGEF1Q9UJ41 708 aa17.53■□□□□ 0.4
LST1-208ENST00000376093 PIK3C2GO75747 1445 aa17.53■□□□□ 0.4
LST1-208ENST00000376093 SEMA3EO15041 775 aa17.52■□□□□ 0.4
LST1-208ENST00000376093 STK26Q9P289 416 aa17.52■□□□□ 0.4
LST1-208ENST00000376093 ONECUT3O60422 494 aaPredicted RBP17.51■□□□□ 0.39
LST1-208ENST00000376093 CDC42BPGQ6DT37 1551 aa17.51■□□□□ 0.39
LST1-208ENST00000376093 LAMC1P11047 1609 aa17.5■□□□□ 0.39
LST1-208ENST00000376093 TRIM6-TRIM34B2RNG4 842 aa17.49■□□□□ 0.39
LST1-208ENST00000376093 TMEM132EQ6IEE7 984 aa17.49■□□□□ 0.39
LST1-208ENST00000376093 LRRC59Q96AG4 307 aaKnown RBP17.49■□□□□ 0.39
LST1-208ENST00000376093 LRPPRCP42704 1394 aaKnown RBP17.49■□□□□ 0.39
LST1-208ENST00000376093 ATAD2Q6PL18 1390 aa17.49■□□□□ 0.39
LST1-208ENST00000376093 PNPLA6Q8IY17 1366 aa17.49■□□□□ 0.39
LST1-208ENST00000376093 TECPR2O15040 1411 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms