RNA–Protein interactions for RNA: ENST00000376089.6

LST1-205, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-205ENST00000376089 DDX12PQ92771 950 aa17.83■□□□□ 0.44
LST1-205ENST00000376089 FBXW7Q969H0 707 aa17.83■□□□□ 0.44
LST1-205ENST00000376089 EPAS1Q99814 870 aa17.83■□□□□ 0.44
LST1-205ENST00000376089 PTPREP23469 700 aa17.82■□□□□ 0.44
LST1-205ENST00000376089 C14orf37Q86TY3 774 aa17.81■□□□□ 0.44
LST1-205ENST00000376089 ARHGEF1Q92888 912 aaKnown RBP17.81■□□□□ 0.44
LST1-205ENST00000376089 XRN1Q8IZH2 1706 aaKnown RBP17.81■□□□□ 0.44
LST1-205ENST00000376089 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.81■□□□□ 0.44
LST1-205ENST00000376089 PTPRUQ92729 1446 aa17.81■□□□□ 0.44
LST1-205ENST00000376089 PIK3R4Q99570 1358 aa17.8■□□□□ 0.44
LST1-205ENST00000376089 SOCS7O14512 581 aa17.8■□□□□ 0.44
LST1-205ENST00000376089 PHLPP1O60346 1717 aa17.8■□□□□ 0.44
LST1-205ENST00000376089 HRO43593 1189 aa17.78■□□□□ 0.44
LST1-205ENST00000376089 AMOTL2Q9Y2J4 779 aa17.78■□□□□ 0.44
LST1-205ENST00000376089 SLC4A5Q9BY07 1137 aa17.77■□□□□ 0.44
LST1-205ENST00000376089 NCOA3Q9Y6Q9 1424 aa17.76■□□□□ 0.43
LST1-205ENST00000376089 SLAIN2Q9P270 581 aa17.76■□□□□ 0.43
LST1-205ENST00000376089 ZBED2Q9BTP6 218 aa17.75■□□□□ 0.43
LST1-205ENST00000376089 KDM2AQ9Y2K7 1162 aa17.75■□□□□ 0.43
LST1-205ENST00000376089 PPLO60437 1756 aa17.75■□□□□ 0.43
LST1-205ENST00000376089 METP08581 1390 aa17.75■□□□□ 0.43
LST1-205ENST00000376089 VPS9D1Q9Y2B5 631 aa17.74■□□□□ 0.43
LST1-205ENST00000376089 SETD1AO15047 1707 aaKnown RBP17.73■□□□□ 0.43
LST1-205ENST00000376089 PPP1R3GB7ZBB8 358 aa17.73■□□□□ 0.43
LST1-205ENST00000376089 PRIM1P49642 420 aaKnown RBP17.73■□□□□ 0.43
LST1-205ENST00000376089 EN1Q05925 392 aaPredicted RBP17.73■□□□□ 0.43
LST1-205ENST00000376089 NBR1Q14596 966 aa17.73■□□□□ 0.43
LST1-205ENST00000376089 COL9A1P20849 921 aa17.72■□□□□ 0.43
LST1-205ENST00000376089 ATF3P18847 181 aa17.71■□□□□ 0.43
LST1-205ENST00000376089 C19orf44Q9H6X5 657 aa17.71■□□□□ 0.43
LST1-205ENST00000376089 NALCNQ8IZF0 1738 aa17.71■□□□□ 0.43
LST1-205ENST00000376089 COL16A1Q07092 1604 aaPredicted RBP17.71■□□□□ 0.43
LST1-205ENST00000376089 C6orf132Q5T0Z8 1188 aa17.7■□□□□ 0.42
LST1-205ENST00000376089 RNF166Q96A37 237 aaPredicted RBP17.7■□□□□ 0.42
LST1-205ENST00000376089 CCDC144AA2RUR9 1427 aa17.68■□□□□ 0.42
LST1-205ENST00000376089 DCCP43146 1447 aa17.67■□□□□ 0.42
LST1-205ENST00000376089 OSBPP22059 807 aa17.67■□□□□ 0.42
LST1-205ENST00000376089 AHDC1Q5TGY3 1603 aaPredicted RBP17.67■□□□□ 0.42
LST1-205ENST00000376089 IFT172Q9UG01 1749 aa17.67■□□□□ 0.42
LST1-205ENST00000376089 GRXCR2A6NFK2 248 aa17.66■□□□□ 0.42
LST1-205ENST00000376089 MPHOSPH9Q99550 1183 aa17.66■□□□□ 0.42
LST1-205ENST00000376089 ADGRL3Q9HAR2 1447 aa17.65■□□□□ 0.42
LST1-205ENST00000376089 RPGRIP1LQ68CZ1 1315 aa17.65■□□□□ 0.42
LST1-205ENST00000376089 JCADQ9P266 1359 aa17.65■□□□□ 0.42
LST1-205ENST00000376089 ASXL1Q8IXJ9 1541 aa17.64■□□□□ 0.41
LST1-205ENST00000376089 BHMG1C9JSJ3 638 aaPredicted RBP17.64■□□□□ 0.41
LST1-205ENST00000376089 TSR1Q2NL82 804 aaKnown RBP17.64■□□□□ 0.41
LST1-205ENST00000376089 MST1RQ04912 1400 aa17.64■□□□□ 0.41
LST1-205ENST00000376089 SETD5Q9C0A6 1442 aa17.64■□□□□ 0.41
LST1-205ENST00000376089 RGS17Q9UGC6 210 aaPredicted RBP17.63■□□□□ 0.41
LST1-205ENST00000376089 SHPRHQ149N8 1683 aa17.62■□□□□ 0.41
LST1-205ENST00000376089 RGL3Q3MIN7 710 aa17.62■□□□□ 0.41
LST1-205ENST00000376089 BRINP3Q76B58 766 aa17.62■□□□□ 0.41
LST1-205ENST00000376089 PTCH1Q13635 1447 aa17.62■□□□□ 0.41
LST1-205ENST00000376089 NHSL1Q5SYE7 1610 aa17.61■□□□□ 0.41
LST1-205ENST00000376089 MLLT3P42568 568 aaPredicted RBP17.61■□□□□ 0.41
LST1-205ENST00000376089 SPATA31E1Q6ZUB1 1445 aa17.61■□□□□ 0.41
LST1-205ENST00000376089 MAP3K7O43318 606 aa17.6■□□□□ 0.41
LST1-205ENST00000376089 PROX2Q3B8N5 592 aa17.6■□□□□ 0.41
LST1-205ENST00000376089 VSIG10Q8N0Z9 540 aa17.6■□□□□ 0.41
LST1-205ENST00000376089 ROBO2Q9HCK4 1378 aa17.6■□□□□ 0.41
LST1-205ENST00000376089 RAB3GAP2Q9H2M9 1393 aa17.59■□□□□ 0.41
LST1-205ENST00000376089 ADGRF5Q8IZF2 1346 aa17.59■□□□□ 0.41
LST1-205ENST00000376089 LRP6O75581 1613 aa17.58■□□□□ 0.41
LST1-205ENST00000376089 PRAG1Q86YV5 1406 aa17.56■□□□□ 0.4
LST1-205ENST00000376089 ANKRD30BQ9BXX2 1392 aa17.55■□□□□ 0.4
LST1-205ENST00000376089 POTEAQ6S8J7 498 aa17.55■□□□□ 0.4
LST1-205ENST00000376089 SPATA31A6Q5VVP1 1343 aa17.54■□□□□ 0.4
LST1-205ENST00000376089 MEX3CQ5U5Q3 659 aaKnown RBP17.54■□□□□ 0.4
LST1-205ENST00000376089 DDX17Q92841 729 aaKnown RBP17.54■□□□□ 0.4
LST1-205ENST00000376089 KNDC1Q76NI1 1749 aa17.54■□□□□ 0.4
LST1-205ENST00000376089 C1orf167Q5SNV9 1468 aa17.54■□□□□ 0.4
LST1-205ENST00000376089 ACIN1Q9UKV3 1341 aaKnown RBP17.53■□□□□ 0.4
LST1-205ENST00000376089 CDHR5Q9HBB8 845 aa17.53■□□□□ 0.4
LST1-205ENST00000376089 RABGEF1Q9UJ41 708 aa17.53■□□□□ 0.4
LST1-205ENST00000376089 PIK3C2GO75747 1445 aa17.53■□□□□ 0.4
LST1-205ENST00000376089 SEMA3EO15041 775 aa17.52■□□□□ 0.4
LST1-205ENST00000376089 STK26Q9P289 416 aa17.52■□□□□ 0.4
LST1-205ENST00000376089 NUTM2BA6NNL0 878 aaPredicted RBP17.51■□□□□ 0.39
LST1-205ENST00000376089 NUTM2EB1AL46 878 aaPredicted RBP17.51■□□□□ 0.39
LST1-205ENST00000376089 ONECUT3O60422 494 aaPredicted RBP17.51■□□□□ 0.39
LST1-205ENST00000376089 CDC42BPGQ6DT37 1551 aa17.51■□□□□ 0.39
LST1-205ENST00000376089 NUTM2AQ8IVF1 878 aaPredicted RBP17.51■□□□□ 0.39
LST1-205ENST00000376089 LAMC1P11047 1609 aa17.5■□□□□ 0.39
LST1-205ENST00000376089 TRIM6-TRIM34B2RNG4 842 aa17.49■□□□□ 0.39
LST1-205ENST00000376089 TMEM132EQ6IEE7 984 aa17.49■□□□□ 0.39
LST1-205ENST00000376089 LRPPRCP42704 1394 aaKnown RBP17.49■□□□□ 0.39
LST1-205ENST00000376089 TECPR2O15040 1411 aa17.48■□□□□ 0.39
LST1-205ENST00000376089 ORAI2Q96SN7 254 aa17.48■□□□□ 0.39
LST1-205ENST00000376089 MYOM2P54296 1465 aa17.48■□□□□ 0.39
LST1-205ENST00000376089 NBPF3Q9H094 633 aa17.47■□□□□ 0.39
LST1-205ENST00000376089 YTHDC2Q9H6S0 1430 aaKnown RBP17.47■□□□□ 0.39
LST1-205ENST00000376089 PNPLA6Q8IY17 1366 aa17.46■□□□□ 0.39
LST1-205ENST00000376089 PLEKHH1Q9ULM0 1364 aa17.46■□□□□ 0.39
LST1-205ENST00000376089 WAPLQ7Z5K2 1190 aa17.46■□□□□ 0.39
LST1-205ENST00000376089 LRRC59Q96AG4 307 aaKnown RBP17.46■□□□□ 0.39
LST1-205ENST00000376089 TSKSQ9UJT2 592 aa17.46■□□□□ 0.39
LST1-205ENST00000376089 NRXN1Q9ULB1 1477 aa17.45■□□□□ 0.38
LST1-205ENST00000376089 NPDC1Q9NQX5 325 aaPredicted RBP17.45■□□□□ 0.38
LST1-205ENST00000376089 KIAA1468Q9P260 1216 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms