RNA–Protein interactions for RNA: ENST00000375639.6

C6orf48-204, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-204ENST00000375639 MAP2P11137 1827 aaKnown RBP23.96■■□□□ 1.43
C6orf48-204ENST00000375639 LTN1O94822 1766 aa23.96■■□□□ 1.43
C6orf48-204ENST00000375639 ANP32CO43423 234 aa23.96■■□□□ 1.43
C6orf48-204ENST00000375639 PRKRIP1Q9H875 184 aaPredicted RBP23.96■■□□□ 1.43
C6orf48-204ENST00000375639 COL14A1Q05707 1796 aaKnown RBP23.94■■□□□ 1.42
C6orf48-204ENST00000375639 PPP2R1AP30153 589 aa23.94■■□□□ 1.42
C6orf48-204ENST00000375639 DIEXFQ68CQ4 756 aaKnown RBP23.94■■□□□ 1.42
C6orf48-204ENST00000375639 IP6K1Q92551 441 aa23.94■■□□□ 1.42
C6orf48-204ENST00000375639 BTG4Q9NY30 223 aa23.94■■□□□ 1.42
C6orf48-204ENST00000375639 HOXC9P31274 260 aa23.93■■□□□ 1.42
C6orf48-204ENST00000375639 MTHFSP49914 203 aa23.93■■□□□ 1.42
C6orf48-204ENST00000375639 AXIN2Q9Y2T1 843 aa23.93■■□□□ 1.42
C6orf48-204ENST00000375639 FNBP4Q8N3X1 1017 aaPredicted RBP23.91■■□□□ 1.42
C6orf48-204ENST00000375639 RTL1A6NKG5 1358 aa23.91■■□□□ 1.42
C6orf48-204ENST00000375639 FLT4P35916 1363 aa23.91■■□□□ 1.42
C6orf48-204ENST00000375639 KIF24Q5T7B8 1368 aa23.91■■□□□ 1.42
C6orf48-204ENST00000375639 EVA1CP58658 441 aa23.9■■□□□ 1.42
C6orf48-204ENST00000375639 RBM6P78332 1123 aaKnown RBP23.9■■□□□ 1.42
C6orf48-204ENST00000375639 HSP90AB2PQ58FF8 381 aa23.9■■□□□ 1.42
C6orf48-204ENST00000375639 COL18A1P39060 1754 aa23.9■■□□□ 1.42
C6orf48-204ENST00000375639 CAMTA1Q9Y6Y1 1673 aa23.89■■□□□ 1.42
C6orf48-204ENST00000375639 LTV1Q96GA3 475 aaPredicted RBP23.89■■□□□ 1.41
C6orf48-204ENST00000375639 STRN4Q9NRL3 753 aa23.89■■□□□ 1.41
C6orf48-204ENST00000375639 USP21Q9UK80 565 aa23.89■■□□□ 1.41
C6orf48-204ENST00000375639 PEAK1Q9H792 1746 aa23.89■■□□□ 1.41
C6orf48-204ENST00000375639 SLIT2O94813 1529 aa23.89■■□□□ 1.41
C6orf48-204ENST00000375639 PLCH1Q4KWH8 1693 aa23.89■■□□□ 1.41
C6orf48-204ENST00000375639 MYBBP1AQ9BQG0 1328 aaKnown RBP23.88■■□□□ 1.41
C6orf48-204ENST00000375639 LMO7Q8WWI1 1683 aa23.88■■□□□ 1.41
C6orf48-204ENST00000375639 BLMP54132 1417 aaPredicted RBP23.87■■□□□ 1.41
C6orf48-204ENST00000375639 SMG6Q86US8 1419 aaKnown RBP23.87■■□□□ 1.41
C6orf48-204ENST00000375639 UNC5CLQ8IV45 518 aa23.87■■□□□ 1.41
C6orf48-204ENST00000375639 QTRT2Q9H974 415 aaKnown RBP23.87■■□□□ 1.41
C6orf48-204ENST00000375639 ABCC6O95255 1503 aa23.87■■□□□ 1.41
C6orf48-204ENST00000375639 RGPD5Q99666 1765 aa23.87■■□□□ 1.41
C6orf48-204ENST00000375639 CSB-PGBD3P0DP91 1061 aa23.86■■□□□ 1.41
C6orf48-204ENST00000375639 ANKRD24Q8TF21 1146 aa23.86■■□□□ 1.41
C6orf48-204ENST00000375639 INSRP06213 1382 aa23.86■■□□□ 1.41
C6orf48-204ENST00000375639 NWD2Q9ULI1 1742 aa23.84■■□□□ 1.41
C6orf48-204ENST00000375639 COL5A2P05997 1499 aaPredicted RBP23.84■■□□□ 1.41
C6orf48-204ENST00000375639 BCL9LQ86UU0 1499 aa23.84■■□□□ 1.41
C6orf48-204ENST00000375639 CFAP53Q96M91 514 aa23.84■■□□□ 1.41
C6orf48-204ENST00000375639 ERBB3P21860 1342 aa23.83■■□□□ 1.4
C6orf48-204ENST00000375639 LARP1Q6PKG0 1096 aaKnown RBP23.82■■□□□ 1.4
C6orf48-204ENST00000375639 CCDC9Q9Y3X0 531 aaKnown RBP23.82■■□□□ 1.4
C6orf48-204ENST00000375639 TOM1L2Q6ZVM7 507 aa23.81■■□□□ 1.4
C6orf48-204ENST00000375639 NRAPQ86VF7 1730 aa23.81■■□□□ 1.4
C6orf48-204ENST00000375639 WDR17Q8IZU2 1322 aa23.81■■□□□ 1.4
C6orf48-204ENST00000375639 EIF4A2Q14240 407 aaKnown RBP23.8■■□□□ 1.4
C6orf48-204ENST00000375639 NLRP2Q9NX02 1062 aa23.79■■□□□ 1.4
C6orf48-204ENST00000375639 DIAPH1O60610 1272 aaKnown RBP23.78■■□□□ 1.4
C6orf48-204ENST00000375639 VPS72Q15906 364 aa23.78■■□□□ 1.4
C6orf48-204ENST00000375639 TRPC5Q9UL62 973 aaPredicted RBP23.78■■□□□ 1.4
C6orf48-204ENST00000375639 USP35Q9P2H5 1018 aa23.77■■□□□ 1.4
C6orf48-204ENST00000375639 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.76■■□□□ 1.39
C6orf48-204ENST00000375639 CRB1P82279 1406 aa23.76■■□□□ 1.39
C6orf48-204ENST00000375639 IL13P35225 146 aa23.75■■□□□ 1.39
C6orf48-204ENST00000375639 NBPF6Q5VWK0 638 aa23.74■■□□□ 1.39
C6orf48-204ENST00000375639 NBPF4Q96M43 638 aa23.74■■□□□ 1.39
C6orf48-204ENST00000375639 SPATA31A5Q5VU36 1347 aa23.74■■□□□ 1.39
C6orf48-204ENST00000375639 SPATA31A7Q8IWB4 1347 aa23.74■■□□□ 1.39
C6orf48-204ENST00000375639 ATRNO75882 1429 aa23.74■■□□□ 1.39
C6orf48-204ENST00000375639 COL3A1P02461 1466 aaPredicted RBP23.74■■□□□ 1.39
C6orf48-204ENST00000375639 GJD4Q96KN9 370 aaPredicted RBP23.73■■□□□ 1.39
C6orf48-204ENST00000375639 EYA1Q99502 592 aa23.73■■□□□ 1.39
C6orf48-204ENST00000375639 CARD10Q9BWT7 1032 aa23.73■■□□□ 1.39
C6orf48-204ENST00000375639 NUDCQ9Y266 331 aa23.73■■□□□ 1.39
C6orf48-204ENST00000375639 U2SURPO15042 1029 aaKnown RBP23.72■■□□□ 1.39
C6orf48-204ENST00000375639 USHBP1Q8N6Y0 703 aa23.72■■□□□ 1.39
C6orf48-204ENST00000375639 SPATA31A1Q5TZJ5 1347 aa23.72■■□□□ 1.39
C6orf48-204ENST00000375639 RGPD2P0DJD1 1756 aa23.71■■□□□ 1.39
C6orf48-204ENST00000375639 CCDC184Q52MB2 194 aa23.71■■□□□ 1.39
C6orf48-204ENST00000375639 MIER1Q8N108 512 aa23.71■■□□□ 1.39
C6orf48-204ENST00000375639 FAM208AQ9UK61 1670 aaKnown RBP23.7■■□□□ 1.39
C6orf48-204ENST00000375639 TCP11L2Q8N4U5 519 aa23.7■■□□□ 1.38
C6orf48-204ENST00000375639 MRS2Q9HD23 443 aa23.7■■□□□ 1.38
C6orf48-204ENST00000375639 IGSF1Q8N6C5 1336 aa23.67■■□□□ 1.38
C6orf48-204ENST00000375639 THRAP3Q9Y2W1 955 aaKnown RBP23.67■■□□□ 1.38
C6orf48-204ENST00000375639 EP400Q96L91 3159 aa23.66■■□□□ 1.38
C6orf48-204ENST00000375639 U2AF1L5P0DN76 240 aaPredicted RBP23.66■■□□□ 1.38
C6orf48-204ENST00000375639 U2AF1Q01081 240 aaKnown RBP eCLIP23.66■■□□□ 1.38
C6orf48-204ENST00000375639 FAM98CQ17RN3 349 aaKnown RBP23.66■■□□□ 1.38
C6orf48-204ENST00000375639 SULT6B1Q6IMI4 303 aa23.66■■□□□ 1.38
C6orf48-204ENST00000375639 HMOX1P09601 288 aa23.65■■□□□ 1.38
C6orf48-204ENST00000375639 GLI3P10071 1580 aa23.65■■□□□ 1.38
C6orf48-204ENST00000375639 A0A0G2JS52 829 aa23.64■■□□□ 1.37
C6orf48-204ENST00000375639 MYT1Q01538 1121 aa23.64■■□□□ 1.37
C6orf48-204ENST00000375639 CCDC125Q86Z20 511 aa23.64■■□□□ 1.37
C6orf48-204ENST00000375639 AEBP1Q8IUX7 1158 aa23.64■■□□□ 1.37
C6orf48-204ENST00000375639 WDR43Q15061 677 aaKnown RBP eCLIP23.63■■□□□ 1.377e-40■□□□□ 10.9
C6orf48-204ENST00000375639 BARGINQ6ZT62 677 aa23.63■■□□□ 1.37
C6orf48-204ENST00000375639 RAPGEF4Q8WZA2 1011 aa23.63■■□□□ 1.37
C6orf48-204ENST00000375639 RGPD1P0DJD0 1748 aa23.62■■□□□ 1.37
C6orf48-204ENST00000375639 CCER2I3L3R5 266 aa23.62■■□□□ 1.37
C6orf48-204ENST00000375639 IL2RBP14784 551 aa23.62■■□□□ 1.37
C6orf48-204ENST00000375639 NCAPD2Q15021 1401 aa23.6■■□□□ 1.37
C6orf48-204ENST00000375639 TATP17735 454 aaPredicted RBP23.6■■□□□ 1.37
C6orf48-204ENST00000375639 CDCA7Q9BWT1 371 aaPredicted RBP23.6■■□□□ 1.37
C6orf48-204ENST00000375639 KDRP35968 1356 aa23.58■■□□□ 1.37
C6orf48-204ENST00000375639 ONECUT3O60422 494 aaPredicted RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms