RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 CASQ1P31415 396 aa6.99□□□□□ -1.29
SCN2A-202ENST00000375427 RBBP5Q15291 538 aaKnown RBP6.99□□□□□ -1.29
SCN2A-202ENST00000375427 DDX27Q96GQ7 796 aaKnown RBP6.99□□□□□ -1.29
SCN2A-202ENST00000375427 STIM2Q9P246 746 aa6.99□□□□□ -1.29
SCN2A-202ENST00000375427 CPLX2Q6PUV4 134 aaKnown RBP6.98□□□□□ -1.29
SCN2A-202ENST00000375427 PDILTQ8N807 584 aa6.98□□□□□ -1.29
SCN2A-202ENST00000375427 OPTNQ96CV9 577 aa6.98□□□□□ -1.29
SCN2A-202ENST00000375427 PPFIA3O75145 1194 aa6.98□□□□□ -1.29
SCN2A-202ENST00000375427 LUC7L3O95232 432 aaKnown RBP6.98□□□□□ -1.29
SCN2A-202ENST00000375427 NAA25Q14CX7 972 aa6.98□□□□□ -1.29
SCN2A-202ENST00000375427 MSL1Q68DK7 614 aa6.98□□□□□ -1.29
SCN2A-202ENST00000375427 CACNA2D3Q8IZS8 1091 aa6.98□□□□□ -1.29
SCN2A-202ENST00000375427 LRRFIP2Q9Y608 721 aaKnown RBP6.98□□□□□ -1.29
SCN2A-202ENST00000375427 MAP7Q14244 749 aa6.98□□□□□ -1.29
SCN2A-202ENST00000375427 PAIP2BQ9ULR5 123 aaKnown RBP6.98□□□□□ -1.29
SCN2A-202ENST00000375427 KIF4BQ2VIQ3 1234 aa6.98□□□□□ -1.29
SCN2A-202ENST00000375427 FMNL3Q8IVF7 1028 aa6.98□□□□□ -1.29
SCN2A-202ENST00000375427 MYO18AQ92614 2054 aaKnown RBP6.98□□□□□ -1.29
SCN2A-202ENST00000375427 ARMC9Q7Z3E5 817 aa6.98□□□□□ -1.29
SCN2A-202ENST00000375427 IWS1Q96ST2 819 aa6.98□□□□□ -1.29
SCN2A-202ENST00000375427 KIF2AO00139 706 aaPredicted RBP6.98□□□□□ -1.29
SCN2A-202ENST00000375427 INF2Q27J81 1249 aa6.98□□□□□ -1.29
SCN2A-202ENST00000375427 CEP57Q86XR8 500 aa6.98□□□□□ -1.29
SCN2A-202ENST00000375427 CCDC152Q4G0S7 254 aa6.97□□□□□ -1.29
SCN2A-202ENST00000375427 ATP6V1E2Q96A05 226 aa6.97□□□□□ -1.29
SCN2A-202ENST00000375427 DIABLOQ9NR28 239 aa6.97□□□□□ -1.29
SCN2A-202ENST00000375427 SPATS2LQ9NUQ6 558 aaKnown RBP6.97□□□□□ -1.29
SCN2A-202ENST00000375427 ERCC3P19447 782 aa6.97□□□□□ -1.29
SCN2A-202ENST00000375427 NUCB1Q02818 461 aa6.97□□□□□ -1.29
SCN2A-202ENST00000375427 NEBLO76041 1014 aa6.97□□□□□ -1.29
SCN2A-202ENST00000375427 LMNB2Q03252 620 aa6.97□□□□□ -1.29
SCN2A-202ENST00000375427 CCDC65Q8IXS2 484 aa6.97□□□□□ -1.29
SCN2A-202ENST00000375427 XAB2Q9HCS7 855 aaKnown RBP6.97□□□□□ -1.29
SCN2A-202ENST00000375427 FBXO2Q9UK22 296 aaPredicted RBP6.97□□□□□ -1.29
SCN2A-202ENST00000375427 BANK1Q8NDB2 785 aa6.97□□□□□ -1.29
SCN2A-202ENST00000375427 DACT3Q96B18 629 aaPredicted RBP6.97□□□□□ -1.29
SCN2A-202ENST00000375427 ODF2LQ9ULJ1 636 aa6.97□□□□□ -1.29
SCN2A-202ENST00000375427 SPECC1L-ADORA2AF8WAN1 911 aa6.97□□□□□ -1.29
SCN2A-202ENST00000375427 TTC31Q49AM3 519 aaPredicted RBP6.97□□□□□ -1.29
SCN2A-202ENST00000375427 PHLDB2Q86SQ0 1253 aa6.97□□□□□ -1.29
SCN2A-202ENST00000375427 VPS37CA5D8V6 355 aaPredicted RBP6.97□□□□□ -1.29
SCN2A-202ENST00000375427 ESPNB1AK53 854 aa6.97□□□□□ -1.29
SCN2A-202ENST00000375427 TRIM21P19474 475 aaKnown RBP6.97□□□□□ -1.29
SCN2A-202ENST00000375427 RBM10P98175 930 aaKnown RBP6.97□□□□□ -1.29
SCN2A-202ENST00000375427 CACTINQ8WUQ7 758 aaKnown RBP6.97□□□□□ -1.29
SCN2A-202ENST00000375427 C16orf45Q96MC5 204 aaPredicted RBP6.97□□□□□ -1.29
SCN2A-202ENST00000375427 SERPINA10Q9UK55 444 aa6.97□□□□□ -1.29
SCN2A-202ENST00000375427 FMNL1O95466 1100 aaPredicted RBP6.96□□□□□ -1.29
SCN2A-202ENST00000375427 PIP4K2AP48426 406 aaPredicted RBP6.96□□□□□ -1.29
SCN2A-202ENST00000375427 CCDC92Q53HC0 331 aaPredicted RBP6.96□□□□□ -1.29
SCN2A-202ENST00000375427 FKBP15Q5T1M5 1219 aa6.96□□□□□ -1.29
SCN2A-202ENST00000375427 SMC4Q9NTJ3 1288 aa6.96□□□□□ -1.29
SCN2A-202ENST00000375427 MTUS1Q9ULD2 1270 aa6.96□□□□□ -1.29
SCN2A-202ENST00000375427 SMARCC2Q8TAQ2 1214 aa6.96□□□□□ -1.29
SCN2A-202ENST00000375427 ZSCAN31Q96LW9 406 aaPredicted RBP6.96□□□□□ -1.29
SCN2A-202ENST00000375427 LMNAP02545 664 aaKnown RBP6.96□□□□□ -1.3
SCN2A-202ENST00000375427 NOP2P46087 812 aaKnown RBP6.96□□□□□ -1.3
SCN2A-202ENST00000375427 CFAP100Q494V2 611 aa6.96□□□□□ -1.3
SCN2A-202ENST00000375427 CGNL1Q0VF96 1302 aa6.96□□□□□ -1.3
SCN2A-202ENST00000375427 RPGRQ92834 1020 aaKnown RBP6.96□□□□□ -1.3
SCN2A-202ENST00000375427 ZMYND8Q9ULU4 1186 aaPredicted RBP6.96□□□□□ -1.3
SCN2A-202ENST00000375427 CAMK4Q16566 473 aa6.96□□□□□ -1.3
SCN2A-202ENST00000375427 MCTP1Q6DN14 999 aa6.96□□□□□ -1.3
SCN2A-202ENST00000375427 CCDC113Q9H0I3 377 aa6.96□□□□□ -1.3
SCN2A-202ENST00000375427 UQCRHLA0A096LP55 91 aa6.96□□□□□ -1.3
SCN2A-202ENST00000375427 ESYT2A0FGR8 921 aa6.96□□□□□ -1.3
SCN2A-202ENST00000375427 UQCRHP07919 91 aa6.96□□□□□ -1.3
SCN2A-202ENST00000375427 ERCC5P28715 1186 aaPredicted RBP6.95□□□□□ -1.3
SCN2A-202ENST00000375427 MAP3K21Q5TCX8 1036 aa6.95□□□□□ -1.3
SCN2A-202ENST00000375427 SYNE3Q6ZMZ3 975 aa6.95□□□□□ -1.3
SCN2A-202ENST00000375427 HOOK3Q86VS8 718 aa6.95□□□□□ -1.3
SCN2A-202ENST00000375427 PALMDQ9NP74 551 aa6.95□□□□□ -1.3
SCN2A-202ENST00000375427 IFFO1Q0D2I5 559 aa6.95□□□□□ -1.3
SCN2A-202ENST00000375427 PLCD3Q8N3E9 789 aa6.95□□□□□ -1.3
SCN2A-202ENST00000375427 PABPN1LA6NDY0 278 aaKnown RBP6.95□□□□□ -1.3
SCN2A-202ENST00000375427 IPO8O15397 1037 aaKnown RBP6.95□□□□□ -1.3
SCN2A-202ENST00000375427 CETN2P41208 172 aa6.95□□□□□ -1.3
SCN2A-202ENST00000375427 DIXDC1Q155Q3 683 aa6.95□□□□□ -1.3
SCN2A-202ENST00000375427 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.95□□□□□ -1.3
SCN2A-202ENST00000375427 NAP1L4Q99733 375 aaKnown RBP6.95□□□□□ -1.3
SCN2A-202ENST00000375427 NUF2Q9BZD4 464 aa6.95□□□□□ -1.3
SCN2A-202ENST00000375427 MAGEC2Q9UBF1 373 aaPredicted RBP6.95□□□□□ -1.3
SCN2A-202ENST00000375427 MAFGO15525 162 aa6.95□□□□□ -1.3
SCN2A-202ENST00000375427 INPP1P49441 399 aa6.95□□□□□ -1.3
SCN2A-202ENST00000375427 BICD2Q8TD16 824 aa6.95□□□□□ -1.3
SCN2A-202ENST00000375427 PAWRQ96IZ0 340 aaKnown RBP6.95□□□□□ -1.3
SCN2A-202ENST00000375427 MAK16Q9BXY0 300 aaKnown RBP6.95□□□□□ -1.3
SCN2A-202ENST00000375427 PFDN1O60925 122 aa6.95□□□□□ -1.3
SCN2A-202ENST00000375427 VPS41P49754 854 aa6.95□□□□□ -1.3
SCN2A-202ENST00000375427 GJC2Q5T442 439 aaPredicted RBP6.95□□□□□ -1.3
SCN2A-202ENST00000375427 LMNTD2Q8IXW0 634 aa6.95□□□□□ -1.3
SCN2A-202ENST00000375427 EPSTI1Q96J88 318 aa6.95□□□□□ -1.3
SCN2A-202ENST00000375427 SLC4A8Q2Y0W8 1093 aa6.95□□□□□ -1.3
SCN2A-202ENST00000375427 NUDCQ9Y266 331 aa6.95□□□□□ -1.3
SCN2A-202ENST00000375427 NSRP1Q9H0G5 558 aaKnown RBP6.95□□□□□ -1.3
SCN2A-202ENST00000375427 BAG4O95429 457 aaKnown RBP6.94□□□□□ -1.3
SCN2A-202ENST00000375427 PSMC4P43686 418 aa6.94□□□□□ -1.3
SCN2A-202ENST00000375427 COPG1Q9Y678 874 aaKnown RBP6.94□□□□□ -1.3
SCN2A-202ENST00000375427 IKBKGQ9Y6K9 419 aa6.94□□□□□ -1.3
SCN2A-202ENST00000375427 PALM3A6NDB9 673 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms